New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 845711NA (NA)4 (0.050) 4/270 11.4 NA noncoding (81/99 nt) RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 845722 NA (NA)noncoding (92/99 nt) RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP78 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

AAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTC  >  NC_000913/845580‑845864
                                                                                                                                              |                                                                                                                                              
aaaGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAgcgc                                                                                                                                                >  1:839224/1‑143 (MQ=255)
  aGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAt                                                                                                                                              >  2:430952/1‑143 (MQ=255)
   gggAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGGGCATc                                                                                                                                             >  1:501184/1‑143 (MQ=255)
   gggAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATc                                                                                                                                             <  1:737514/143‑1 (MQ=255)
     gaggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                           >  2:283672/1‑143 (MQ=255)
      aggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTCGCGCGTCAgg                                                                                                                                          >  1:820069/1‑143 (MQ=255)
      aggaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                                          <  2:1001453/143‑1 (MQ=255)
        gaAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCAGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAACTTTAATAAGTTGCAAGATACCATATAAGACTAATCAGCGAAGCGCATCACGCa                                                                                                                                        >  2:422578/1‑143 (MQ=25)
            ggATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtgt                                                                                                                                    <  2:167293/143‑1 (MQ=255)
            ggAGATTAAGCAGGTGGCTGACCGCGTGCGGGCTTTTTTGCCGGATGCGGCGTTTACGTCTTATCCGTCCTACAAGTTCATGCAATTGAAATAAGTAGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAcgt                                                                                                                                    <  1:480029/143‑1 (MQ=25)
                  tgggCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                                                                                              <  1:951811/140‑1 (MQ=255)
                  tAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCtta                                                                                                                              <  1:951879/143‑1 (MQ=255)
                   aaGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttat                                                                                                                             >  1:985216/1‑143 (MQ=255)
                       aGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAag                                                                                                                         <  1:158494/143‑1 (MQ=255)
                        ggTTGCTGACAACGTGCGGGAATCGTTGCAGGAGGCGGCGGAAACGCCTTATCCGTCCTACGAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                                                                                                        <  1:1110983/143‑1 (MQ=25)
                         gTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCCTGCACTTATAATAAGTTGCCCGATATCCTGTGGGCCCGCTAAACGTAGCGCGTCAGGCAATGTGTCTTACTAacag                                                                                                                       >  2:781117/1‑143 (MQ=37)
                              tGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGtg                                                                                                                  <  1:1089916/143‑1 (MQ=255)
                              tGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGta                                                                                                                  >  1:561148/1‑142 (MQ=255)
                               gACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTACTATGTGTCCAGATGTACACCCAACCGTATAAGCGTAGCGCCTCAGGCACTGTGTCTTATTAAGAGACGtgc                                                                                                                 >  2:305255/1‑143 (MQ=25)
                                 cAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCGATGTGTCTTATTAAGAGACGtgctg                                                                                                               >  2:658857/1‑143 (MQ=255)
                                     gggCGGGCTTTTATGCCGGATGCGGCGTGAACGCCTCATCCGTCCCACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaa                                                                                                           <  1:1183245/141‑1 (MQ=255)
                                     gTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCTTGATACGCGTAGCGCATCAGGCAGTGTGTCTTATTAAGAGACGGGCCGCaaa                                                                                                           >  1:193492/1‑143 (MQ=37)
                                      tgagggCTATATAGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCAGGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCaaaa                                                                                                          <  2:680705/140‑1 (MQ=37)
                                            cTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGATACGTGCTGCAAAAATTACt                                                                                                    >  1:283614/1‑143 (MQ=255)
                                            cTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                                    <  2:873439/143‑1 (MQ=255)
                                            cTTTGTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                                    <  2:965139/143‑1 (MQ=255)
                                              tttttGCCGTAGTCTGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATGTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGc                                                                                                  <  2:103458/143‑1 (MQ=38)
                                               ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCGTACAAGTTCATGAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCaa                                                                                                <  2:340494/143‑1 (MQ=255)
                                               ttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCa                                                                                                 >  2:921778/1‑143 (MQ=255)
                                                 ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAg                                                                                               >  2:1147590/1‑143 (MQ=255)
                                                 ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAg                                                                                               >  1:1162519/1‑143 (MQ=255)
                                                    ccGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAgcgc                                                                                            <  1:680629/143‑1 (MQ=255)
                                                     cGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATGCCTGCAAgcggt                                                                                           >  2:1064939/1‑141 (MQ=255)
                                                      ggATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTg                                                                                          <  1:430952/143‑1 (MQ=255)
                                                             gcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcggc                                                                                   >  1:180345/1‑143 (MQ=255)
                                                             ccgTGCACGCCGTATCCGTCCTACATGTTCCTGCTATTTTAATACTTTGCGAGATATCCTGTAGGAGTAACGGGCGGAGCGCCCCCGGCAATTTGTCTTATTGAGATACGTTCTGCAAAAATTCCTGCAAGCGCTGGCTcggc                                                                                   <  2:173021/142‑1 (MQ=255)
                                                                tGAACGCCTTCTCCGTCCCACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTCGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg                                                                                <  1:619857/143‑1 (MQ=255)
                                                                tGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCggg                                                                                <  1:206320/143‑1 (MQ=255)
                                                                  aaCGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGtt                                                                              >  1:860215/1‑143 (MQ=255)
                                                                   aCGCCTTATCCGTCCTACAAGTTCATGCAATTTGAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTc                                                                             <  1:222900/143‑1 (MQ=255)
                                                                   aCGCCTGATCCGTCCCACTAGGTCATGCAACTCTAATCAGTCGCCAGCTATCCTGTCGGGCTGGTCAGCGGTCTGCAGCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCGCGGCGGGTTc                                                                             <  2:787395/143‑1 (MQ=255)
                                                                     gcgttATCCGGCCTACAATTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCtt                                                                           <  1:1071311/140‑1 (MQ=255)
                                                                       cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGCTATCCTGTAGGCCTGATCAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCCAAAATTCCTGCAAGCGCTGGCTCGGCGGGCTCCTGa                                                                         >  2:808044/1‑143 (MQ=39)
                                                                       cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAACAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                                         >  1:119074/1‑143 (MQ=255)
                                                                       cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                                         <  1:1296868/143‑1 (MQ=255)
                                                                       cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                                         <  1:88557/143‑1 (MQ=255)
                                                                        ttATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGAt                                                                        <  1:834609/143‑1 (MQ=255)
                                                                        ttATCCGTCCTACAAGTTCATGCAATTGTAATAAGTTGCCAGATATCCGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGAt                                                                        <  2:617082/143‑1 (MQ=255)
                                                                          aTCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCa                                                                      <  1:841936/143‑1 (MQ=255)
                                                                           tcggTCATACAAGTTCATGGAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGAGAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCaa                                                                     <  2:551729/140‑1 (MQ=255)
                                                                            ccGTCCTACAAGTTCATGCAATTGTAATAAGTTGCCCGATATCAGGTAGGCCTGAGAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAac                                                                    <  1:987616/143‑1 (MQ=255)
                                                                             cGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAaca                                                                   >  1:632061/1‑143 (MQ=255)
                                                                               tCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACAcc                                                                 >  1:976868/1‑143 (MQ=255)
                                                                                ccTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCt                                                                <  1:918747/143‑1 (MQ=255)
                                                                                    cAAGTTCAGGCAATGTTAAGAAGTGGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCgg                                                            <  1:617865/143‑1 (MQ=255)
                                                                                     aaGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGa                                                           <  2:1074652/143‑1 (MQ=255)
                                                                                      aGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAt                                                          <  1:182115/143‑1 (MQ=255)
                                                                                       gTTCATGCAATTTTAGTAAGTTGCCAGATATACTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTTCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAtt                                                         <  2:289511/143‑1 (MQ=255)
                                                                                       gTTCATGCAAGTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTGTCTTATTAAGAGACGTGCTGCAATAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGttt                                                         <  2:1386158/143‑1 (MQ=255)
                                                                                           aTGCAATTTTAATAAGTTGCGAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCa                                                     <  1:760498/143‑1 (MQ=255)
                                                                                           aTGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCa                                                     >  1:856482/1‑143 (MQ=255)
                                                                                                            tggcAGAGATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCCGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGcc                                    <  2:1000780/140‑1 (MQ=255)
                                                                                                            tGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCCATGTGTATTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATTAACCGCTGCGGATTGCCATCTTCATCAATCCGTcc                                    >  2:100633/1‑143 (MQ=38)
                                                                                                             gCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGGTTGCCATCTTCCGCAATCCGGCCt                                   >  1:695515/1‑143 (MQ=255)
                                                                                                                aGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATGCGGCCCTTg                                >  2:887820/1‑143 (MQ=255)
                                                                                                                aGATACCCTGTAGGCCTGATAGGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAATATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTg                                <  2:1302145/143‑1 (MQ=255)
                                                                                                                 gATATCCTGTCGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGt                               <  1:923188/143‑1 (MQ=255)
                                                                                                                 agtatCCTCTAGGCCTGATAAGCGTAGCGCATCAGGCACTGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTGGGCGGGTTCTTGATCAGCGCCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGt                               <  2:626747/141‑1 (MQ=255)
                                                                                                                   tatCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCg                             >  2:166749/1‑143 (MQ=255)
                                                                                                                    atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa                            <  1:693736/143‑1 (MQ=255)
                                                                                                                    atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa                            >  2:992955/1‑143 (MQ=255)
                                                                                                                    atCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGa                            <  2:1275754/143‑1 (MQ=255)
                                                                                                                        tGTAGGCCTGATAGGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAGAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCGGCGAATTGCCATCTTCCGCAATCCGGCCTTTGTCGATaaa                        <  2:711958/143‑1 (MQ=255)
                                                                                                                        tGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCCGCGGATTGCCAGCTTCCGGCATCCGGCCTTTGTCGAGaaa                        >  2:398536/1‑143 (MQ=39)
                                                                                                                         gTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAg                       <  2:1162884/143‑1 (MQ=255)
                                                                                                                           agcccTGATAAGCGTAGCGCATCAGGCAATGCGTCTTATTAAGAGACGTGCTGCAAAAATGCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGAt                     <  1:15864/140‑1 (MQ=255)
                                                                                                                           aGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACCCCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGAt                     <  1:1068948/143‑1 (MQ=255)
                                                                                                                            ggCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATc                    <  1:592041/143‑1 (MQ=255)
                                                                                                                             gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTCTTACGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGACGGGTTATTGATCAACACCTGCTGATTGCCATCTTCCGCAATCCGGCCTTTGTGGATAAAGAtga                   >  1:465577/1‑141 (MQ=255)
                                                                                                                             gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa                   <  1:1138661/143‑1 (MQ=255)
                                                                                                                             gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa                   >  1:53019/1‑143 (MQ=255)
                                                                                                                             gCCTGACAAGCGTCGCCCATGAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAACATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa                   <  2:1375163/143‑1 (MQ=255)
                                                                                                                               cTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACCCCTGCGGATTGCCACCTTCCGCAATCCGGCCTTCGTCGATCAAGCTCAGc                 >  2:722842/1‑143 (MQ=255)
                                                                                                                                      gCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAg          <  1:780616/143‑1 (MQ=255)
                                                                                                                                         tAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGCTCAACACCTGCGGATTGCCCTCTTCCGCAATCCGGCCTTTGTCGATAAAGAGCATCCGCGAAGCtc       >  1:169688/1‑142 (MQ=255)
                                                                                                                                            cgcATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACtt    <  1:947007/143‑1 (MQ=255)
                                                                                                                                             gcagcaGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACttt   <  1:837888/143‑1 (MQ=255)
                                                                                                                                              cATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCAGAGGGATCTGGAGCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTtc  >  1:204577/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
AAAGGGAGGAAGGGATATTAAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTC  >  NC_000913/845580‑845864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.