Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1293040 1309404 16365 40 [0] [0] 50 tdk–[kch] tdk,insZ,insZ,insZ,adhE,ychE,oppA,oppB,oppC,oppD,oppF,yciU,clsA,yciY,[kch]

AGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGT  >  NC_000913/1292900‑1293168
                                                                                                                                           |                                                                                                                                 
aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                <  1:409554‑M2/143‑4 (MQ=255)
aGAATTTTAAGTGCTTCGCTCATTGTAGCAATATCCACCAGCAATTGGATGGTTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                <  1:588322‑M2/143‑4 (MQ=255)
      ttGAGTGCGTCGCTCATTGTAGTAATCTCAAACGTCTATTGGGGTGGTTTGTTGAGGTAAGAATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgac                                                                                                                          >  2:198742‑M2/1‑134 (MQ=255)
           tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                     <  1:67899‑M2/143‑15 (MQ=255)
             cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                                                   <  1:344392‑M2/143‑17 (MQ=255)
               tCGCTCATTGTAGTAAGCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactta                                                                                                                 >  1:349554‑M2/1‑125 (MQ=255)
                cGCTCATTGTAGTAATATTAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                >  2:249395‑M2/1‑124 (MQ=255)
                  cTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactacaacttattg                                                                                                              <  2:423169‑M2/143‑22 (MQ=255)
                          agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                      >  1:348813‑M2/1‑114 (MQ=255)
                           gtaATCTCAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                     >  1:116153‑M2/1‑113 (MQ=255)
                               tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                 >  1:408821‑M2/1‑109 (MQ=255)
                                ctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgt                                                                                                <  2:537806‑M2/143‑36 (MQ=255)
                                 tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                               <  1:458398‑M2/143‑37 (MQ=255)
                                       ttATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcgaagttattggtagtgtgttatgttgagcta                                                                                         <  2:223912‑M2/143‑43 (MQ=255)
                                                      ttgttgAGGTAATAATAGAGCCTTAAACTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                          >  1:250290‑M2/1‑86 (MQ=255)
                                                          ggaGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                      >  2:720263‑M2/2‑82 (MQ=255)
                                                            aGGTAATAGTAGGGCCTTAATTTCTGTTGTGCATGAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATGTTGTGCCGattagtgactccagcttgttgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                    >  2:142342‑M2/1‑80 (MQ=255)
                                                            aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                    >  1:641646‑M2/1‑80 (MQ=255)
                                                            aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                    <  1:689290‑M2/143‑64 (MQ=255)
                                                              gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATATTGGACCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                  <  2:465721‑M2/143‑66 (MQ=255)
                                                               taataaTAGAGCCTTAAATTCAGTTGTGCAATAGTCAGGTATGTAAGTAATTCAAACTTGTTCTGTATTTTGTGTTTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                 >  1:534689‑M2/1‑77 (MQ=255)
                                                                   aacaGAGCCTTAAATTCAGTTGTGCCATAGCCAGGAAGGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                             >  2:300183‑M2/1‑73 (MQ=255)
                                                                          ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgacgacttcgtcatgcagctccaccgatt                                                      <  1:664178‑M2/143‑78 (MQ=255)
                                                                            ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                    >  2:215368‑M2/1‑64 (MQ=255)
                                                                                aTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgcga                                                <  2:229450‑M2/143‑84 (MQ=255)
                                                                                  tCATTTGTGCAATGGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgattactttgtcatgcagctccaccgattttgagaac                                              >  2:424666‑M2/1‑58 (MQ=255)
                                                                                  tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                              >  1:732052‑M2/1‑58 (MQ=255)
                                                                                        gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacgtattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgagttcgacaacgacagc                                        <  2:414244‑M2/143‑92 (MQ=255)
                                                                                          gCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgacttcaacttattgatagtgttttatgttcagataatgcacgatgactttgtgatgcagctccaccgattttgagaacggcagcga                                      <  2:717396‑M2/143‑94 (MQ=255)
                                                                                           cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttgttgatagtgttttatgttcagataatgcccgatgactttgtcatgcgactctcccgattttgagaacgacagcgat                                     <  1:659349‑M2/143‑95 (MQ=255)
                                                                                                 ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaacgacagcgacttccgt                               <  1:282824‑M2/143‑101 (MQ=255)
                                                                                                                 ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt               <  1:384829‑M2/143‑117 (MQ=255)
                                                                                                                 ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagct               <  2:732991‑M2/143‑117 (MQ=255)
                                                                                                                    aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct            <  2:227338‑M2/143‑120 (MQ=255)
                                                                                                                      aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagatcgaccgcgacttccgtcccagccgtgccagctgctgc          <  1:290898‑M2/143‑122 (MQ=255)
                                                                                                                         tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc       >  1:350867‑M2/1‑19 (MQ=255)
                                                                                                                            tCTTTATTTTGTGCCGggtaatgactccatcttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga    >  1:240893‑M2/1‑16 (MQ=255)
                                                                                                                            tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccaagccgtgaaagggcctacctcaga    <  1:731310‑M2/143‑128 (MQ=255)
                                                                                                                            tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga    >  2:47090‑M2/1‑16 (MQ=255)
                                                                                                                              tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgccaccgatt  <  2:28793‑M2/143‑130 (MQ=255)
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AGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGT  >  NC_000913/1292900‑1293168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: