| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,718,259 | A→C | 12.3% | S90R (AGT→AGG) | yfiF ← | putative methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,718,259 | 0 | A | C | 12.3% | 149.7 / 3.0 | 60 | S90R (AGT→AGG) | yfiF | putative methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (28/23); new base C (3/6); total (31/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCCGTGCCTGACGCTTTTGTCAATTCCGCTTCATCCACCACATGGTACGCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTG > NC_000913/2718022‑2718493 | ttCCTTGCCTTGCGCTTTTTTCAATTCCGCTTCATCCCCCACATGGTACGCTTTGCTGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCAc < 2:933443/239‑1 (MQ=255) tGCCTGACGCTTTTGTCAATTCCGCTTCATCCACCACATGGTACGCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCCGGTTTCTTCCGCACGCTGACGACAGCAA‑ACCTCCCGCTCACAAAAAACTTTACCAccact > 2:967747/1‑234 (MQ=255) gCCTGACGCTTTTGTCAATTCCGCTTCATCCACCACATGGTACGCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATg < 1:678619/238‑1 (MQ=255) gACGCTTTTGTCAATTCCGCTTCATCCACCACATGGTACGCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACCCTGACGCC‑CCCACACTTCCGGTCCAATAAAACATTTACCACGGAAGcgcac > 2:684615/1‑235 (MQ=255) ttttGTCCATTCCCCTTCATCCACCACATGGTACGGTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACCCTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGa < 1:751242/238‑1 (MQ=255) ttttGTCAATTCCGCTTCATCCACCACATGGTACGGTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAACCGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGAt < 1:926463/239‑1 (MQ=255) tACGCTTTGCGGTTTGCTGCCATCCAGCGAAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGgcg < 1:927699/238‑1 (MQ=255) gCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCCCGCTGACGCC‑GCAACACTTCCGGATCAATAAAACTTTTACAACTCATGCCACCGTGAACGGCCTTTTCCGGCGTCCCATCACCCGCcgcgcg > 1:1065765/1‑239 (MQ=255) gCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGCCCTTTTCCGGCGTCTCATCACCCGGcgcgcg > 1:49771/1‑239 (MQ=255) ttGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGCCATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGAACCCTGACGCC‑CAAACACTTCGGTATCAATAAAACTTTTACCCCCGTAGCCACCGTGACAGCCCTTTTCCGGCTCGTCACAACCCGACGCTCgggc > 2:648912/1‑238 (MQ=255) ttGCGGTTTGCGGCCATCCAGCGCAAAGCTACTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGCCATGCATTTTAGCCGTAGACGCGGGGTTCTTCCGCACGCTGACGCC‑GCAACACGTCAGGGTCAATAAAACGTTTACCCCTGATGCCACCGTTACCCGCCTTTTGCGGCTACTCCTTACCCCGGGCACGGGa > 2:1066815/1‑239 (MQ=255) tGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCgggga > 1:880769/1‑237 (MQ=255) gctgcCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCCCGCTGACGCC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCCCCTCACCCGGCCCGCGGGAAACCTTgg > 2:760000/1‑237 (MQ=255) ctgcCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTACGCCCGCTGACGCC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGCTCCGCCTTTTCCGGCGCCCCATCACACCCCCCCCGGGAAACCGGgcg > 2:702948/1‑238 (MQ=255) tgcCATCCAGCCGAAAGGTTATTTAAAGCGCGGCGTTACACCCTGGATAAACCAGGCGCGAACAATCGCGTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATGTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTgcgc < 1:120991/238‑1 (MQ=255) ttcttTAAAACGCGGGGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTTCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACt < 1:702948/239‑1 (MQ=255) ttAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCg < 1:681705/239‑1 (MQ=255) aaCGCGGCTTTACCCCTGGGATAACCCAGGCCGGAAACATCGCTTCCGGACGGCTTTGGAAAAGTCCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCCCGCTGACGAC‑GCAACACTGCCGGATCAATAAACCTTTTACCACTGATGCCGCCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCa < 2:880769/239‑1 (MQ=255) aaCGCGGCGTTACCCTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCa < 1:614710/239‑1 (MQ=255) aCGGGGCGTTCCCCTTTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCAc < 1:252680/239‑1 (MQ=255) aCGCGGCGTTACCCTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCAc < 1:967747/239‑1 (MQ=255) ggcgTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCCCGCTGACGAC‑GCACCACTTCCGGATCAATAAAATTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGCCCCATTACCCGGCGCGCGGGAAACCGTCCCCCCCTGCGAACCCTCCCCCTTACggcccggggg > 2:614710/1‑231 (MQ=255) acacTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGAct < 1:133632/239‑1 (MQ=255) tctGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCCCTTGCGGTCACGGGGCTGACTCTGt > 1:278677/1‑239 (MQ=255) tGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGttt > 1:170619/1‑239 (MQ=255) ccAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGGGCGCCACGGCGAATCTTCCCCCTTCCGGTCACGGGGCGGACTCTGTTTTTCATccc > 1:681834/1‑237 (MQ=255) gcgcGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGCCCCTGTTTGTCATCccgggc > 1:241147/1‑239 (MQ=255) gcgcGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCccggcc > 1:855577/1‑237 (MQ=255) gcgcGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCCCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACGCTGTTTGTCATAccgggc > 1:246921/1‑239 (MQ=255) gcgcGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGGCTCATCACCCGGCGCGCGGGAAACCGGGCGCCACGGCGAATCTTCCCCCTTGCGGTCACGGGCGCGCCTCTGTTTgcactaccgggg > 2:720771/1‑228 (MQ=255) ccttCGCTTCCGGACGGCTAGGGAAAATTGCCTTGCATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGGTGGCGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCTCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCGTCCCGCTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGa < 2:1065765/236‑1 (MQ=255) gTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTAATCGCGGGCGGGGCGCCGGCCACCGCCCGCACgagggttt > 1:305856/1‑231 (MQ=255) gTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCCGCTTGTCATCGCGGGCCGGGCGACGGACACCGCAAGACCGACAtttt > 1:985224/1‑236 (MQ=255) gTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTCCGCCACGGCGGATCTTCCCCCTTGCGGTCACGGGGCTGACTCTGTTTTGCATCGCGGGGGGGGCGCGGGCCCACCCCAGACCGAGATTTTccg > 2:651423/1‑238 (MQ=255) gTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGCCATCGCGGGCGGGGTGACGGCCCCCGCCACGACGGAAtttt > 1:820040/1‑236 (MQ=255) ccTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTTCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGCCAGCACGACATTTTCCT‑gg > 1:206028/1‑238 (MQ=255) cATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGGC‑GCAACACTTCCGGATCAATAAAACTTTTACCACGGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGAcgccc < 1:435902/239‑1 (MQ=255) gCCGTAGCCGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTcc < 1:720771/239‑1 (MQ=255) gTAGACGCGGGTTTCTTCCGCACGGCGACGAC‑GCAACCCTTCCGGATCAATAAAACTTTTACCCCTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCgg < 1:108813/239‑1 (MQ=255) tAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGGCTCTGTTTGTCATCCGGGGCGGGGGGACGGCCACCGCCACCCAGGACTTTTCCTGGGAGGCCAGCCCCC‑TTCCCGGt > 2:392546/1‑239 (MQ=255) cttcCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTgg < 1:651423/239‑1 (MQ=255) cGCACGCTGCCGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCCCTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCCTCGCGGGCGTGGCGACGGCCACCGTCCGGACGAGATTTTCCT‑GGGCGCCCCCCCCCTTTCCCCGGCCCCGGGTCGTggttga > 2:1062516/1‑235 (MQ=255) gcccGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCCCCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACg < 1:129133/236‑1 (MQ=255) ggcgcc‑gCAACCCCTCCGGATCAAAAAAACTTTTCCCCCTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTTCGGCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCa < 2:855577/234‑1 (MQ=255) cgccccaccccTTCCGGATCAATAAACCTTTTACCCCTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGa < 1:684615/229‑1 (MQ=255) cgacccaccctttCCGGTTCAATAAAACTTTTCCCCCTGATGCCACCGTTATCGGCCTTTGCCGGCGTCTCATCCCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAACCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGa < 2:241147/228‑1 (MQ=255) ttCAATAAAACTTTTCCCCCTGATGCCCCCGTGATCGGCCTTTCCCGGCGGCTCATCCCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGa < 2:883390/238‑1 (MQ=255) aTCAATAAAACGTTTCCCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCGCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCgg < 1:904902/238‑1 (MQ=255) aTCAAATAAACTTTTACCACGGATGCCCCCGTGAGCGGCCTGTTCCGGCGTCTCATCCCCCGGCGCGGGGGAACCCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGGTTGGCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCgg < 1:1062516/238‑1 (MQ=255) aTAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGAcgcccg > 2:880940/1‑177 (MQ=255) aTAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGAcgcccg < 1:880940/177‑1 (MQ=255) aTAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGacata > 1:883390/1‑239 (MQ=255) aTAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGCTGTGGGTACGTTTATCAGAATCATCATCCCTGCGGacaa > 2:598726/1‑237 (MQ=255) tAAAACTTTCACCCCTGGTGCCACCGTGTTCGGCCTTGTCCGGCGTCCCATCGCCCGGCGCGCGGGAAACCGTTGGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTTACTCTGTTTGCCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGacatac < 2:246921/239‑1 (MQ=255) aaaaCTTTTCCCAACGACGCCCCCTTGTCTGGCCTTTTCCGGCGTCCCCCCCCCCGGCACGCGGGAATCCGTCCCCCACGGCGAATCTTCCCACTTGCGGCCACGGGGCTGAATCTGTTTTGCAGCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGacataca < 2:985224/239‑1 (MQ=255) ttttACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTgg < 1:563067/197‑1 (MQ=255) ttACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGTAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGATTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGTTTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGGTTATCATAATCATCATCACTCCGGACATACATCACttt > 1:722382/1‑239 (MQ=255) ttACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACCCGGGTTGTGGGTACGTTTATCCGAATCATCATCCCTCCGGACATACATCCCtt > 1:176661/1‑238 (MQ=255) aCCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCCCTTGCGGTCCCGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGCCGGCCCCCGTCAGCACGCGATTTTCTT‑GTCCGCCCCCCCCCTTTCCCGGTACCCGGGTTTTGGTTCCGTTTTTCAGAACCCTCATCCCAGCGGCCCACCATCCCTTTg > 2:623193/1‑238 (MQ=255) aCCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGCTCGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGGTGTGGGGACTTTTTTCAGAATCACCATCCCTGCGGCCAAAAATCACTTTg > 2:618114/1‑238 (MQ=255) | TTCCGTGCCTGACGCTTTTGTCAATTCCGCTTCATCCACCACATGGTACGCTTTGCGGTTTGCTGCCATCCAGCGCAAAGCTTCTTTAAAACGCGGCGTTACACTCTGGATAAACCAGGCGCGAACAATCGCTTCCGGACGGCTCTGGAAAAGTGCCTGACATGCATTTTCGCCGTAGACGCGGGTTTCTTCCGCACGCTGACGAC‑GCAACACTTCCGGATCAATAAAACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCT‑GGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTG > NC_000913/2718022‑2718493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |