| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,124,053 | T→C | 14.3% | E60G (GAG→GGG) | glcG ← | DUF336 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,124,053 | 0 | T | C | 14.3% | 175.9 / 2.6 | 72 | E60G (GAG→GGG) | glcG | DUF336 family protein |
| Reads supporting (aligned to +/- strand): ref base T (41/18); new base C (2/10); total (43/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCGTTTTCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGCACAGAGGT > NC_000913/3123816‑3124289 | ctcGTTTTCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTtct > 1:561646/1‑238 (MQ=255) cGTTTTCGCTTATTTCGCCAACCCCGCTGCTGCCGCTTTCGCGTCCTGCCCTTCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCt < 1:513209/239‑1 (MQ=255) cGTTTTCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCCGTCACGAACGCGGGACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAATTTCACGACGCCCCATCGCGGCGGGACGCGCTTTccccg > 2:552726/1‑238 (MQ=255) cGTTTTCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTtct > 1:272424/1‑236 (MQ=255) tttcctttttttCCCCCACCCCCCTTCTGCCCCTTTCGCGACCCGCCCATCCTGTCCTCCGGTTAAACCAGAAACGCCCCCGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCTGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTgg < 2:410198/229‑1 (MQ=255) ttCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTTCCCTgggc > 1:1062714/1‑238 (MQ=255) tttCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑aa > 1:410198/1‑238 (MQ=255) ctgctgCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAAC‑CGCAATCGgagc > 1:240276/1‑238 (MQ=255) ttCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCCCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCCCGCAATCGTCCa > 1:173864/1‑238 (MQ=255) ccccccaagccTGTGTCCCGGTTAAACCAAAAACCCCCCCGGACCCAATAATTGTCCCAACCACAACAACCGGGACGCCGCCTGCCAGCGACGTTAATAACGGCGCTGTAACGAACGCGGTACGGCCGTTGTTCACCATCTCTGCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGGCCATGCGACtt < 2:341874/230‑1 (MQ=255) cgcATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGGGCTTTCCCCTGGGAGGTTA‑AAGC‑CCCAATCGGCGCGCAATCGTCCAGGCCACTaaaa > 2:148057/1‑237 (MQ=255) gCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAAAGCCAGCAGATg > 1:401374/1‑239 (MQ=255) cGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGCCTTAACGCCAGCAGATGAcc > 1:219121/1‑238 (MQ=255) gTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGGGATAT‑AAGA‑CGCAATCGACGCGCAATCGTCCATGCGGCCTAAACCCAGCAGGTGAccggc > 1:339356/1‑237 (MQ=255) aaaCCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCCCTTTCTCCTGGGACACAT‑AAGC‑CGCAATCGGCGCGCCATCCGCCAGGCGACTTAACCCCACCAAAGGAcccccgca > 2:1008216/1‑237 (MQ=255) aaaCGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGCCGCCCCAGCGCGGCGGTACGGGCTTTCTCCTGGGGGATTT‑AAGC‑CGCAATCGGCGCGCCATCGCCCCTTCGACTTAACGCCACAAGAAGACCCCCGTcccgggca > 2:154743/1‑232 (MQ=255) aCGGCCCAAATAATTGCCCCACCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCCCGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAAt < 1:776257/239‑1 (MQ=255) ataatTTGCCACACCACAACCACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGGGGTACGTCCGTTGTTCACCATCCCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGa < 1:289356/239‑1 (MQ=255) ttGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATTCGCCTTAACGCCAGCAGATGACCGCCGTCACCGGCAACAGCAATGGAAACCGACCAGt > 1:1088828/1‑239 (MQ=255) aTCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTAtttt > 1:96903/1‑239 (MQ=255) tCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTCGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑ACAC‑CGCAATCGGCGCGCAAACGTCCATGCAACTTAACACCAGCCGATGAACGCCACCACACGCAACACAAATGGAAAAAAAACAATAAttttt > 2:298038/1‑239 (MQ=255) tCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGGTAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAACAGATGACCCCCGCCCTCGGCAAAAACAAAGGAAAAAGACCAGTGAttttt > 2:462497/1‑239 (MQ=255) tCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGGACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAACACGACCAGTTAttttt > 1:256166/1‑239 (MQ=255) ggTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCCCtt > 1:797385/1‑238 (MQ=255) aCGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATc < 2:121032/152‑1 (MQ=255) aCGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATc > 1:121032/1‑152 (MQ=255) aCGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCCGATGACCGCCGTCAACGGCAACCGCACTGGAAACAAACCAGTTATTTTTCTGCGCCCCTTCCt > 2:404492/1‑238 (MQ=255) aCGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTCCGGCaataat > 1:88262/1‑238 (MQ=255) cGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAAtt > 1:920636/1‑238 (MQ=255) taaaaccGGCGCAGTCACGAACGCGGTACGTCCGGTGTTCCCCTTCTTATAAAAGCCCTTAGTTCCACGACGCCCCCGCGGCGGGTTACGCTCTTTCCCCTGGGGAATAA‑AACC‑CGCAATCGGCGCCCAAACGTCCAGGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCAc < 2:1062714/233‑1 (MQ=255) gcAGTCACGAACGGGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTCCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTg < 1:96101/239‑1 (MQ=255) cccgtcccagaCGGGGTTCCTCCGTTTTCCCCCCTCCCTGTATAGCCCTTAGTTTCCCGACGCCCCGGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAACCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTg < 2:401374/229‑1 (MQ=255) aaCGCGGTACGTCCGTTGTTCACCATCCCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAg < 1:552726/239‑1 (MQ=255) ggTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACCGCAATGGAAACAGACCAGTTATTTTTCTGCGCACCTTCCTGACCCCCGGCAATAATTGCCCC‑CGCCATTTGCTGGCTAaaaaat > 2:14526/1‑236 (MQ=255) ggTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGaaag > 2:259438/1‑236 (MQ=255) ggTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATg > 1:420363/1‑238 (MQ=255) ggTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCCCTTCCTGACCTGCGGCACTAATTGCACT‑CGCCATTTTCTGGCTAAGactta > 1:656898/1‑235 (MQ=255) tCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAg > 1:677328/1‑239 (MQ=255) gtccACCATCCCTTCAAACCCCTTAGTTTCACGACGCCCCAGCGGGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCa < 1:404492/236‑1 (MQ=255) tCACCTCCTCTTCATCCCCCTTAGTTTCCCCGCCCCCCGGCGAGGCGTTCCGCCCTTTCCACAGGGACTAAT‑AGCC‑CCGACTCGGCGCGCGATCGTCCATGCGCTTTAGCGCCAGCCGATTACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTTACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCAtt < 2:240276/239‑1 (MQ=255) cACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTTGACT‑AGCCATTTTCTGGGTAAGAATGACtttattttttattt > 2:929856/1‑239 (MQ=255) cACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTg < 1:922525/210‑1 (MQ=255) cACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTg > 2:922525/1‑210 (MQ=255) cATCTCTTCGTAGCCCTTAGTTTCACGACCCCCCAGGGCGGCGGTACGCGTTTTCCCCGGGAAGATAA‑AAGG‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGt < 2:464310/239‑1 (MQ=255) ctTCATAGCCCTTTGTTTCCCGCCCCCCCGGCGCGGCGGTACGGGTTTTCCCCGGGGAGATAA‑AAGC‑CGCAAGCGGCGCGCAATCGCCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTc < 2:920636/239‑1 (MQ=255) ctTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATTCGACTTAACGCCCGCACATGACCGCCGTCATCGGCAACAGCAATGGACACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCCGCGGGCATCATT‑CACTCCGCCACTTCCTGCCTCAGCATGACTTTCGTTTCTATTTTGtttt > 2:629355/1‑235 (MQ=255) ctTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTAt > 1:146378/1‑237 (MQ=255) tAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCttt > 1:965227/1‑238 (MQ=255) tAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGAGGACCGCCGGCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTCCGGCAACAATTGCACT‑CGCCATTTGCGGGTTAAAACAGACTTTAATTTTTATTTGTTTATTACtttt > 2:569325/1‑239 (MQ=255) cccTTAGTTTCACGACGCCCCAGCGCGGCGGTGCGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCCTCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCAAT‑CGCCATTTGCTGGCTCAGCATGACTTTAGGTTTCATTTTGTTAATCCTTTTCaa > 1:60943/1‑239 (MQ=255) cccTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCctc < 1:1056524/158‑1 (MQ=255) cccTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGAACGCCGTCACCGGCAACAGCAATGGAAACATACCAGTTATTTTTCTGCGCCTCTTCCTTACCTGCGGGAATAATTTCAAC‑CGCCCTTTGCTGGCTACAAATGACTTTTGTTTTCATTTTGTTATTCCtttttca > 2:346694/1‑236 (MQ=255) cccTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGCCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCctc > 2:1056524/1‑158 (MQ=255) cctttttttCCCGCCGCCCCTGCGCTGCGTTCCCCGTTTTCTCC‑GGGGGAAAT‑AAACGCGTAACCGGCGCAAAATCGTCCAGGCGGCTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGTGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAg < 2:420363/233‑1 (MQ=255) ttAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCa < 1:885242/111‑1 (MQ=255) ttAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCa > 2:885242/1‑111 (MQ=255) ttAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAggg > 2:1039887/1‑239 (MQ=255) aGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACCGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGACCT‑CGCCATTTCTTGGCTAAGAATGACTTTAGTTTTCATTTTTTTATTCCTTTTCAAgg > 2:18896/1‑236 (MQ=255) aGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTTTTCCTTTTCAAGGGCt > 1:1066728/1‑239 (MQ=255) cACGACGCCCCAGCGCGGCGGTACGAGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCCGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGGTATTTTTCTGCGCCTCTTCCTGACCTGCTGCAATAATTGCACT‑CGCCCTTTTCTGGCTCAAGATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGATTGtt > 2:491/1‑238 (MQ=255) acgacgCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTTTCCGCCTCTTCCTGACCCGCGGCACTAATTGCACC‑CCCCATTTGCCGGCTTAGAATGCCTTTAGTTTTCTTTTTGTTATTCCTTTTCCAGGGCTTGttat > 2:968105/1‑237 (MQ=255) ccccAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAAAGACAGCAGATGACCGCCGTAATCGGCAACAGCAATGGAAAAAGACCAGATATTTTTCTGCGCCTCTTCCTGACCTCCGGAAATAAATGCACC‑CGCCATTTGCTTGCCAAGACTGAATTTAGTTTTCATTTTGTTATTACTTTTCAAGGGCTAGTTCTCAAAtt > 2:861868/1‑239 (MQ=255) cccaggcgggcggTACGCGCTTTCCCCTGGGAAATTA‑AAGC‑CGCAACCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAAttt < 1:1008216/231‑1 (MQ=255) cccAGCGCGGCGTGCCGCGTTTTAGCGTGGGAGATGT‑AAGC‑CGGAAGCGGTCCAAAAGCGTCCATGCGTCTTAACGCCAGCAGATGACCGCCGTCAGCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAAGGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAAttt < 1:989770/239‑1 (MQ=255) gcggcgGTACGCGTTTTCCCCTGGGAGAATA‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATc < 1:148057/238‑1 (MQ=255) gcggcgGTACGCCCTTTCCCCTGGGAAATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATc < 1:212297/238‑1 (MQ=255) cggcggTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGttt < 1:637177/192‑1 (MQ=255) cggcggTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGttt > 2:637177/1‑192 (MQ=255) gcggTACGGGCTTTCCCCTGGGAGATAT‑AAGC‑CGAAAGCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAg < 1:154743/238‑1 (MQ=255) cggTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGGCTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGGTATTTTTCTGCGCCTCTTCCTGACATGCGGCAATAATTGGACT‑CGCCTTTTGTTGGCTAAGAATGACTTTAGTTTTCATTTGTTTATTCCTTTTCAAGGGCTGGTTTTACAATTTCAATCAAGta > 2:258107/1‑238 (MQ=255) ggTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTg < 1:259438/238‑1 (MQ=255) cgcgTTTTCCCCGGGGAGATAA‑AAGC‑CCAAACCGGCGCCTAAGCGGCCGTGCGGATTAACGCCGGCAGATCACCGGCGTAATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGca < 2:845221/239‑1 (MQ=255) cgttttCTCCTGGGAAATAA‑ACGC‑CGAAATGGGCCCGCAATCGTCCATGCCGCTTACCCCCAGCAGGTTACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGGCCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGcaca < 2:824890/236‑1 (MQ=255) cccTTTCTCCTGGGGGAAATAAAGC‑CGCAATCGGCGCGCACTGCTCCATGCGCTATAACGCCAGTAGTGGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGcac < 2:719024/237‑1 (MQ=255) gcTTTTCCCTGGGAGAATT‑AAGC‑AGCAATCGGCCGGAAATGGTCCATGCGACTTAACGCCAGCAGATGCCCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGATAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGcaca < 1:861868/238‑1 (MQ=255) ctcCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCATTGACGCACAGAGGt > 1:824890/1‑238 (MQ=255) | CTCGTTTTCGCTTATTTCGCCAACACCGCTGCTGCCGCTTTCGCGACCTGCGCATCCTGTGCTCCGGTTAAACCAGAAACGCCCACGGCACCAATAATTTGCCCATCCACAACAACCGGTACGCCGCCTTCCAGCGACGTTAATAACGGCGCAGTCACGAACGCGGTACGTCCGTTGTTCACCATCTCTTCATAGCCCTTAGTTTCACGACGCCCCAGCGCGGCGGTACGCGCTTTCTCCTGGGAGATAT‑AAGC‑CGCAATCGGCGCGCAATCGTCCATGCGACTTAACGCCAGCAGATGACCGCCGTCATCGGCAACAGCAATGGAAACAGACCAGTTATTTTTCTGCGCCTCTTCCTGACCTGCGGCAATAATTGCACT‑CGCCATTTGCTGGCTAAGAATGACTTTAGTTTTCATTTTGTTATTCCTTTTCAAGGGCTTGTTCTACAATTTCAATCCAGTGACGCACAGAGGT > NC_000913/3123816‑3124289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |