| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,537,714 | A→C | 15.1% | V351G (GTG→GGG) | nanM ← | N‑acetylneuraminic acid mutarotase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,537,714 | 0 | A | C | 15.1% | 182.1 / 2.5 | 66 | V351G (GTG→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
| Reads supporting (aligned to +/- strand): ref base A (45/9); new base C (2/10); total (47/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.10e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCATCTTCCCTGTCCGGTAATGGCAGTCCTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAG > NC_000913/4537486‑4537946 | gcgcATCTTCCCTGTCCGGTAATGGCAGTCCTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTg‑c < 2:1066249/238‑1 (MQ=255) ccttttCCCTCGCCGGTAAGGGCAGTACTTCCCCAAACCCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAAAGATGGGGCGA‑TATTAGTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCACTGAAGCGGTAG‑TTTTGT‑ACTGTGACTTTATTATCCTGCACAGTGATCAAAACTGAATCCGTCACCGCTTTg‑ccggc < 2:688215/235‑3 (MQ=255) gCAGTCCTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑ATTTGT‑ACTGTGACTTTATTATCCTTAACAGTGATCAAACCTGAATCCGTCACCGCTTTG‑CCGCCTTCAGTTTCACCGCCaataat > 1:540755/1‑239 (MQ=255) ccTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCt < 2:125984/205‑1 (MQ=255) ccTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCt > 1:125984/1‑205 (MQ=255) ccTTCGCCAGAGGCCATGGCATTAGACTGACCAGCAACGGTAAAAACATAGTAATAATCGGGCAA‑TATTATTGG‑TTTCATATAAATTCCGCGTAATGGAAATGACAAA‑TTG‑ATAGAAGGGCCCCTTTACCGGG‑GCCTTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTAAACCCGTCCCCGTTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATa < 1:1099312/239‑1 (MQ=255) cTTCGCAAAACGCCATGGCATTAGACTGACCAGAAACGGTAAAAACATAGTAATAATCGGGCGA‑TTTTATTGC‑GTTCATATAAATTTCGGGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTCCGGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTAATCAAAACTGAATCCGTCCCCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAg < 1:352974/239‑1 (MQ=255) cTTCCCCATACCCCATGGCATTAGACTGACCAGCAACGGTAAGAACATGGTAA‑AAACGGGGGATTATTATTGG‑GTTCATAAAAATTCCGCGTAATTGAAATGAAAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCTTTAG‑TTTTGT‑ACTGTGATTTTATTATCCTTCACAGTGATAAAAACTGAATCCGTCCCCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAg < 1:93527/239‑1 (MQ=255) gCCATACGCCATGGCTTTAGACTGACCAGCACCGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTATCAGTGATCAAAACTGAATCCGTCACGGCTTTC‑ACGCCGGCAGTTTCACCCCAAAAAATCAAAAGACta > 2:1066687/1‑239 (MQ=255) ggCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGc > 1:543746/1‑239 (MQ=255) gCATGAGACTGACAAGCAACGGAAAAAAAATAGTAAAAATCGGGCAA‑TATT‑TTGCGGTTCATAAAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑CCCCTGAAGCGTTAG‑TTTTGT‑CCTGTGACTTTATTATCCTTCACAGTGATCAAAACTAAATCCGTCCCCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAggg < 1:709018/237‑1 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCCCCGCTTTG‑CCCCCTGCAGTTTCACCCCCAATAATCAATAGACTATTATTCCCGGGCAATGTTaac > 2:709018/1‑234 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTg‑ccgcc < 2:768535/184‑1 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTg‑ccgcc > 1:768535/1‑184 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGCCTATTATTCCAGGGCACTGATACTCCg > 1:204705/1‑239 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGCCTATTATTCCAGGGCAATGATACCCCg > 1:706139/1‑239 (MQ=255) aCCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGGGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAACCAATAAACAATTATTCCAGGGCAATGAAACCCCg > 2:13898/1‑239 (MQ=255) aCATAATAAAAAGCGGGCAA‑TTTTATTGC‑TTTCATATAAATTTCGCGTAATTAAAATGACAAA‑TTG‑AAAGCAGGCCCCTTTTCCCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑CCTGTGACTTTATTATCCTTCACAGTGATAAAAACTGAATCCGTCACCGTTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCg < 1:696325/239‑1 (MQ=255) aGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATCGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATaa > 1:467579/1‑239 (MQ=255) taatCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATACTTCACAGTGATCAAAACTGAATCCGCCACCGCTTTG‑CCGCCTGCAGTTTTACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACATTCCGATAAttaa > 1:862287/1‑236 (MQ=255) gggCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TCTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAAATGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGTGATAATTCACCCg > 1:231804/1‑237 (MQ=255) gCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATCCTCCGTAGGCCCGACCTTGCGATAATTAACCCGAttt > 1:685037/1‑239 (MQ=255) gCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGa > 1:362652/1‑224 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACtatta > 1:10409/1‑172 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGCTACTCCGTAGGCCCGACCTTCCGATAATTCACCCGATTTATCCCATTTCCCGt > 1:25779/1‑239 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGCTACCCCCTAGGCCCGACCTTGCGATAATTAACCCGATCTATACCATTTCCCGt > 2:79317/1‑239 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGCTTTATCCCATTTCCCGt > 1:313084/1‑239 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGt > 1:325168/1‑239 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCCCAGGCCCAACCTTGCGATAATTCACCCGATTTATCCCATTTCCGGt > 2:646809/1‑239 (MQ=255) ttCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATAAATAGACTATTATTCCAGGGCAATGATACCCCTTAGCCCGGACCTTGCGTAAATTACCCCGCTTTATCCCATTTccctt > 1:148773/1‑237 (MQ=255) ataAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACATTTCGGAAATTCACCCGCTTTATACCATTTCCCGTTAtac > 2:627456/1‑237 (MQ=255) attgtgcgTAATTGGAATGTCAAA‑TTGTATACATGTGCCCCTTTA‑CGGG‑GCCCTGGA‑CGTTTGATTTTTTGTCTGGGCTTTTATTACCTTACTGATTGAAAAAACCTTAACCCCACCCCCTTTTC‑CCGCTTGACGTTTCCCCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCaa < 2:25779/234‑1 (MQ=255) cgcgTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATa > 1:148626/1‑175 (MQ=255) cgcgTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTAATCCCATTTCCCGTTATCCCAAAAAta > 2:293286/1‑238 (MQ=255) cgcgTAATCGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCACTGATCCTCCGTAGCCCCGACCTTGCGTTAATTACCCCGGTTTATCCCATTTCCCTTTAGTCCaaaccta > 2:681226/1‑235 (MQ=255) cgcgTAA‑TGGAATGAAAAATTTG‑ATAGCAGGCCCCCTTTCCCGGG‑CCCCGGAAGCGTTAG‑TTTTGT‑ACGGTGATTTTATTACCCTTCACAGTGATCAAAACTGAATCCGTCCCCGCTTGG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATg < 1:611345/239‑1 (MQ=255) aaaTTGAAATGACAAA‑GTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGGTTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTTATAAAAACTGAATCCGTCACCGTTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAata < 1:293286/238‑1 (MQ=255) tttaaTGACTAA‑TTT‑ATAGGAGGGCCCCTTTCCCGGGCGCACTAAAGGTTTTT‑TTTTTC‑TCTGTCTCTTTATTTCCCTTCACAGTAACAAAAATTAACTCCG‑CCCCGATGTGCCCGCCTGCATTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCa < 2:313084/236‑1 (MQ=255) aTGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTACTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTg > 1:219086/1‑237 (MQ=255) aCAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTACCCCGATTTATCCCATTTCCCGTTATGCCACAGATGAATATCAGTC‑Ttata > 1:603214/1‑239 (MQ=255) cAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCg > 1:624125/1‑164 (MQ=255) cAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGa > 1:267826/1‑126 (MQ=255) ggCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCATTAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCTCCCGATTTATCCCATTTCCCGTTATGCCACAGCTTAATATCAGCG‑GTAAAAGGTTTTTACAGGcc > 2:723067/1‑239 (MQ=255) ggCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAgg > 1:311387/1‑237 (MQ=255) ggCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAAAATCAGTG‑CTAAATGATTTTTTAAgg > 2:408768/1‑237 (MQ=255) ttACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTT‑CCGCCTGCCGTTTCCCCGCCAATAATCAATAGACTCTTATTCCCGGGCAATGATACTCCGTAGGCCCGACCTTGCGTTCATTCACCCGGTTTATCCCATTTCCCCTTTTGCCAAAAGTGAAATTCAATGCCTAT‑TTATTTTTTCCCGCCTTCAtcc > 2:257013/1‑237 (MQ=255) cgggg‑gCCTGGAAGCGTTAG‑TTTGTC‑ACTGTGTCTTAATTACCCTCCCCGGTAACCAAACCTAAATCCGGCCCCGTTTTG‑CCGCCGGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCa < 1:646809/237‑1 (MQ=255) ccGGG‑GCCCTGAAGCGTTTG‑TTTTGT‑ACTTTGATTTTATTATCCTTCACAGTGATAAAAACTGAATCCGTCACGGCTTTG‑CCGCCGGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCa < 1:257013/239‑1 (MQ=255) ccGGG‑CCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGAATTTATTATCCTCCACATTGATAAAAACTGAATCCGTCCCCGCTTTG‑CCGCCTGCAGTTCCCCCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCa < 1:408768/239‑1 (MQ=255) g‑gCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGt > 1:344568/1‑239 (MQ=255) gCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAatat > 1:783583/1‑199 (MQ=255) cccTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATACTTCAAAGTGACAAAAACTGAATCAATACCCGATTAG‑CCGACTGCACATACACCGACACAACTCCACAGACAAATATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTCTCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGt > 1:594693/1‑237 (MQ=255) ttAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGCTAATTCACCCGATTTATCCCATTTCCCGTTAGGCCAAAGATGAATATCAGTC‑CTAATTGATTTTTTCAGTCCTTCATGCGCCTATTTCTTACCGt > 2:1060333/1‑236 (MQ=255) t‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGtt > 1:1085912/1‑219 (MQ=255) tgACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTccc > 1:120077/1‑154 (MQ=255) tgACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGa > 1:1039625/1‑187 (MQ=255) tattatCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCt > 1:556505/1‑239 (MQ=255) atCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGa > 1:650548/1‑239 (MQ=255) ttCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGCTTTATCCCATTTCCCGTTATGCCAAAGACGAATATCAGTG‑CTATATGATTTTTTCCGGCCTTCATACGCATAGTTCTTACCGTTTTGGAAATTTTTTCGTGAACCTTGGAAAcc > 2:541591/1‑239 (MQ=255) cacaGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATCCGCa > 2:907484/1‑193 (MQ=255) cacaGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTAATCCCATTTCCCGTTATGCCAAAGATGAATATCAGCG‑CTATATGATTTTTTCAGGCCTTCATGCGCATATTTCTTACCGTTCTGGTAATTTTCTCTGGAAACtttaacacga > 2:607220/1‑231 (MQ=255) cacaGTGATCAAAACTAAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCa < 1:907484/193‑1 (MQ=255) ttacaaaaaCTGAATCCGTCACCGTTTTC‑GCCTCTGCATTTTCCCCGCCAATAATCAATAGACTATTATACCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCt < 1:175038/234‑1 (MQ=255) aaacAAAACGGAATCCGGCCCCGTTTTC‑CCCCCTGGATTTCAACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCt < 1:1060333/235‑1 (MQ=255) aaTCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAAtata > 1:139830/1‑239 (MQ=255) tCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTTCGATACTTCAACCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CCATATGATTTTTTCAGGCCTTCATGCCAATATTCATTGCCGTTCTGGAAATTTTCCTGTTGACCTTTGATTCCGGCCCCTCCCCCaaaacaaaa > 2:1036328/1‑233 (MQ=255) | GCGCATCTTCCCTGTCCGGTAATGGCAGTCCTTCGCCATACGCCATGGCATTAGACTGACCAGCAACGGTAAGAACATAGTAATAATCGGGCGA‑TATTATTGC‑GTTCATATAAATTTCGCGTAATTGAAATGACAAA‑TTG‑ATAGCAGGGCCCCTTTACCGGG‑GCCCTGAAGCGTTAG‑TTTTGT‑ACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTG‑CCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCATTTCCCGTTATGCCAAAGATGAATATCAGTG‑CTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAG > NC_000913/4537486‑4537946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |