New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	14 (0.160)	66 (0.820)	51/398	NT	75.9%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	1209619 =	29 (0.360)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208041‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGA  >  NC_000913/1209619‑1209851                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGCGTTTTGTTCCT                                                                                                                                                                                                                                                         >  1:847442/1‑239   GCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATAATAACCGGAATAGCTATGAAACCGGTGCGTCCTAATTCAACCGTTGCGCAATTTAGTTTTTCTCCTT                                                                                                                                                                                                                                                        >  2:1000748/1‑238                      CGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAAGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCACTCATAACCGGTATAGCGATGAAACCGGTGCGTCCTAATGTAGCCATGGCTGCATTGAGTTTTATCCCTTCTCCCAAACCACCGTTTATG                                                                                                                                                                                                                                    >  1:510192/1‑239                         TGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAA                                                                                                                                                                                                                                 >  2:288306/1‑239                                           CAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATTAAACCGGGGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGTTCCTTCTCCCAAACCAACGTTTTTGAAAATGAAGAAAAAAAAAaaa                                                                                                                                                                                                               >  2:543795/1‑236                                                   GCAACCCCGGCTTTATTAACCCCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CAT                                                                                                                                                                                                      <  2:577165/239‑1                                                    CAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CAT                                                                                                                                                                                                      <  1:956085/238‑1                                                        accgggcTTATTAAACCCAACCTGGAATACAACTGTATTTCCAACCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCACACTGAATGATTACTGATTGCGCAATACCACCAATCAGAACCGGTATAGCTATGAAACCGGTGCGTCCTAAGGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CAGCATTC                                                                                                                                                                                                 <  2:445183/232‑1                                                              cttttgtAACGCCACCCGGCATACCACGGTTTTTCCCTTCCCCCCTGGTGCCGAATCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTTCTGAATTCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCT                                                                                                                                                                                            <  2:159721/231‑1                                                                      ACGCATCCGGGAATACAACGGTATTTCCACCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCACAATGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGGCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAAACAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGG                                                                                                                                                                                   <  1:355398/239‑1                                                                          AACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCACCGTTTATGAAAATGAAGAAATAACAAGAAAATGG‑CATCATTCCGGCTTTAACCAGGGGGA                                                                                                                                                                               >  2:520893/1‑239                                                                          AACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGA                                                                                                                                                                               >  1:842448/1‑239                                                                          AACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGA                                                                                                                                                                               >  1:375422/1‑239                                                                            CCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGGATAGCTATTAAACCGGGGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAAAAATAACAAGCAAACGGCCAACA‑TCCTGCTTTTACCAGGGGGATT                                                                                                                                                                             >  2:941613/1‑239                                                                                  attCAACTGGATTTCCAACCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                        <  1:943254/235‑1                                                                                      AACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAACCATAACCGGTATGGCTATGAAACCGGTGCGTCCTAATGTACCCGTTGCGGCATTGGGTTTTGCTCCTTTTCCCAAACCACAGTTTCTGAAAATAAGAAAATACCAAGCAAATGC‑CATCATTCCTCCTTTAACCAAGGGATTTTAAaaatctt                                                                                                                                                                   >  2:991002/1‑232                                                                                       ACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTA                                                                                                                                                                  <  1:637355/239‑1                                                                                           ttTTTCCTTCCCCACCAGAGGAAGATGTTTTTGGGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGG                                                                                                                                                              <  2:958250/237‑1                                                                                           TATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG                                                                                                                                                               >  1:82429/1‑238                                                                                           TATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACAAGGGGGATTTAACATACTAATTG                                                                                                                                                               >  2:1086407/1‑238                                                                                             ttcCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCT                                                                                                                                                            <  1:520893/236‑1                                                                                              TTCCATCCCCCCCAGAGGCATATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTA                                                                                                                                                           <  1:787074/239‑1                                                                                                CCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATACTTATTGGCTATG                                                                                                                                                         >  1:683066/1‑239                                                                                                       CCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAAAATGATTATTGGCAATGTACGCGc                                                                                                                                                  >  2:852227/1‑238                                                                                                          CAGGGGCAGATGCTTTTTCGCCATTCCCCCCCCCCTGAATGATTACTTATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATC                                                                                                                                               <  2:48656/239‑1                                                                                                             AGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAATTAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAcc                                                                                                                                            >  1:739685/1‑237                                                                                                                aAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAA                                                                                                                                          <  1:760684/237‑1                                                                                                                  GATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGG                                                                                                                                                                                   >  2:435167/1‑195                                                                                                                  GATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGG                                                                                                                                                                                   <  1:435167/195‑1                                                                                                                    ttCTTTTGCGGCTTTCCCCCCCCCTTGAATTATTACTGATGGCTCAATCCCACCAAGCATACCCGGTAGAGCTATGAAACCGGTGCGGCCTAATGTAGCCGTTGATGCATTGAGTTTTGCTCCGTCTCCCAACCCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                     <  2:739685/237‑1                                                                                                                    TGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                        <  1:548421/236‑1                                                                                                                    TGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                        <  1:288306/236‑1                                                                                                                      gTTTTGGGGCATTCCACCCCCACTGAATGATTTCTGATTGCTCAATACCACCAATCAGAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAGGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCA                                                                                                                                   <  1:991002/238‑1                                                                                                                           GCGGCATTCCCCCCCCACTCAATGATTTGTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                              <  1:1065917/239‑1                                                                                                                            CGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACAC                                                                                                                             <  1:65391/239‑1                                                                                                                               ctTTCCCCCCCCTATGAATTATTCCTGGTTGCCCAATACCACCAAGCATAACCGGTTTAGCTATGCAACCGGTGCGTCCTAATGTAGCCGTTGCTTCATTGAGTTTTGCCCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAG                                                                                                                           <  2:375422/236‑1                                                                                                                                 TTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAATCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                        <  2:442013/191‑1                                                                                                                                 TTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                        >  1:442013/1‑191                                                                                                                                          cccttAATGATTACTTATTTGTAAATACCACCAATCATAACCGGTATAGCTTTGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTA                                                                                                               <  2:842448/234‑1                                                                                                                                           ACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAAATAACAAGCAAATGG‑CATCATTCCTGATTTTACCAGAGGGATTTAACATGCTCATTGGCTATGTCCCCGAATCAAAAAAAGCACAAAACACAAATCTACAACGAAA                                                                                                              >  2:396738/1‑239                                                                                                                                              GAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCCAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGGACCAAAACAAAAATCTACAACGAAAAGC                                                                                                           >  2:203021/1‑239                                                                                                                                               AATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAAAATGCTTATGGGCTATGTACGCGTATCAACCAAAGACCAGAACAACGATCTACAACGTAAAGC                                                                                                           >  2:124588/1‑238                                                                                                                                                     TACTGTTTTCTCAATACCCCCAATCCTAACCGGGTAGGCTATGAAACCGGGGCGTCCTAATGTAGGCGTTGCTGCAGTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTGCAACGTAATGCGCTGAAC                                                                                                    <  2:510192/239‑1                                                                                                                                                         GATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTATCCCGTATAAACAAAAGACCAGAAAACAACTCTACAACGTAATGGCCGGAACTtgg                                                                                                >  2:71758/1‑236                                                                                                                                                                        CCAATCCTAACCGGTTTAGCTTTTAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCCCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGA                                                                                 <  2:847442/239‑1                                                                                                                                                                             CATAACCGGGAGAGCTAAGAAACCGGTGCGTTCTAAGGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCGTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTT                                                                            <  1:211976/239‑1                                                                                                                                                                                      TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCCGGATGGGAGCTGATTTTTGAAGACAAG                                                                   >  1:374599/1‑239                                                                                                                                                                                      TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGAATCAACAAATGACCAGAACAAAGATCTACAACGTAATGCGCTGAACTGCGACAGATGCGAGGTGATTTTTGAAAACAAa                                                                   >  2:153674/1‑238                                                                                                                                                                                          GCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCACCAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGCTGGGAGCTGATTTTTGAAGCCAAGTTAA                                                               >  1:108985/1‑239                                                                                                                                                                                             ATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGAAAAGATAAGCG                                                            >  2:771887/1‑239                                                                                                                                                                                                AAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCA                                                         >  1:849100/1‑239                                                                                                                                                                                                AAACCGGGTCGTCCAAAGGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATACTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCA                                                         <  2:683066/239‑1                                                                                                                                                                                                     GGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAG                                                    >  1:4153/1‑239                                                                                                                                                                                                     GGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAA                                                     >  1:357053/1‑238                                                                                                                                                                                                      GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACACCGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAACCGGCACAAAG                                                    >  1:696755/1‑238                                                                                                                                                                                                      GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                     >  2:372086/1‑157                                                                                                                                                                                                      GTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                     <  1:372086/157‑1                                                                                                                                                                                                           TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGACGGATGCGAGCTGATTTTTGAAACAAAGAAAAGCGGCAAAAAATCCGAA                                              >  2:473879/1‑239                                                                                                                                                                                                                 TGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTC                                                                                                                                                                                                 <  2:522496/86‑1                                                                                                                                                                                                                 TGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTC                                                                                                                                                                                                 >  1:522496/1‑86                                                                                                                                                                                                                     GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAGTGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCCGGAGGCGACTTGATTTTTAAAGACAAAAAAAACGGACAAAAACCCGAAAAGCCGGAAC                                    >  2:429921/1‑239                                                                                                                                                                                                                     GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCTTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGG                                      >  1:350495/1‑237                                                                                                                                                                                                                     GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTTTGCAGGATGCGAGCTGATTTTTGAAGACAAAATAAGCGGCAAAAAATCCAAAAGGCCGGGAC                                    >  2:1080810/1‑239                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACA                                                       >  1:357821/1‑219                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAAAAAACCGGCAAAAAGTCCGAAAGGCCGGGAag                                   >  2:878077/1‑237                                                                                                                                                                                                                      CCGTTGCTGCATTGAATTTTGCTCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACA                                                       <  2:357821/219‑1                                                                                                                                                                                                                           GCTGGATTGGTTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑AATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAA                              <  2:374599/239‑1                                                                                                                                                                                                                              GCATTGAGTTTTGCTCCTTCCCCCAAACCAACGTTTATAAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGGTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAA                            <  1:693752/238‑1                                                                                                                                                                                                                                             CCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTA             >  1:1085933/1‑238                                                                                                                                                                                                                                                TCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGATTATTGGCTATGTACGCGTATCAACAAATGACTAGAACACAGATCTACAACGTAATGCGATGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCCCAAAGTCCGCAAGGCCGGGACCGAAAAAACTGCTCAGGACATTATCG          >  1:406281/1‑238                                                                                                                                                                                                                                                    CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGG     <  2:350495/239‑1                                                                                                                                                                                                                                                    CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGG     <  1:153674/239‑1                                                                                                                                                                                                                                                     CAAACCAACGTTTTTTAAAATGAAGAAATAACAAGCAAATGG‑CATGATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAGCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT    <  2:82429/239‑1                                                                                                                                                                                                                                                     CAAACCAACGTTTATGAAAATGAAGAAAAAACAAGCAAATGG‑CATCATTCCTGCTTTTTCCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT    <  2:76932/239‑1                                                                                                                                                                                                                                                     CAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAACAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT    <  1:4331/239‑1                                                                                                                                                                                                                                                       AACTAACTTTTAATAAAATGAAAAAAAAACAAGCAAAGGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAAACGGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGA  <  2:108985/239‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208041‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGG‑CATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGA  >  NC_000913/1209619‑1209851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.