New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2670137103 (1.190)3 (0.040) 3/416 NT 3.9% coding (1106/1362 nt) hcaE 3‑phenylpropionate dioxygenase, large (alpha) subunit
?NC_000913 = 2670349 50 (0.600)coding (1318/1362 nt) hcaE 3‑phenylpropionate dioxygenase, large (alpha) subunit
Rejected: Frequency below/above cutoff threshold.

TTGGTCCTGCTGGTTTTCTCGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCGACCGCCGCAAAGGCGTCCAGCCACCGA  >  NC_000913/2670113‑2670576
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                    
ttGGTCCTGCAGGTTTTCCCGAGAAGGATCACTCGGAGATCTGGTTTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGtg                                                                                                                                                                                                                                    >  1:874792‑M2/1‑237 (MQ=255)
        gctgGTTTTCTCGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGAAGCGAAAGCTGGCAGGAAggccccgaaaa                                                                                                                                                                                                                            >  2:844493/1‑229 (MQ=255)
                   cGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCCCCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGACACTGCCGCTCGTGGAATGTACCCACGCTGGTCCCATCTTCTGAGTACCCAACACTGGCCGGAAGtacccgaaaaaaccccccct                                                                                                                                                                                                                  <  2:994613‑M2/238‑21 (MQ=255)
                             gACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGTTAAAACCGCCGCTTACCAGCagg                                                                                                                                                                                                        <  1:704575/238‑1 (MQ=255)
                               gctggggcacaggTGTTAAATTCCAGAAATTGCTTAAGGGCCACGGCGCCCGCAACGGCAACTGGTGGTTGGAAATGGGGCTTGGTCAGAAAAAGGCCCGCGCCGAGGGCATTCCTGGATTGACTACCAATATCTTTTCAAAAACTGCCGCTCGTGGAATGTCCCAACGCTGGGCCGATCTTCTGTGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCaggag                                                                                                                                                                                                      <  2:497490/228‑1 (MQ=255)
                               cgcGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCaggag                                                                                                                                                                                                      <  1:821952/236‑1 (MQ=255)
                               cccGGAGAACTGTGGTGAAATCCAGAAATGGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGAAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCaggag                                                                                                                                                                                                      <  1:515273/236‑1 (MQ=255)
                               cTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCaggag                                                                                                                                                                                                      <  1:762596/238‑1 (MQ=255)
                               cTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCaggag                                                                                                                                                                                                      <  1:838448/238‑1 (MQ=255)
                               cTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCCCGGCTTTCCAGCagaagg                                                                                                                                                                                                     >  1:214256/1‑239 (MQ=255)
                                         tcattaaaaaTCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGAAGGTGATGaatgg                                                                                                                                                                                           >  1:96018/8‑236 (MQ=255)
                                             gtgAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGGAGCGAAACCTGGCAGGAAGGGCTCGATAAAACCGCCGCTTACCAGCAGGAGGggagtgaaggaggg                                                                                                                                                                                       >  2:633738/1‑228 (MQ=255)
                                                aaaTCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAAGAGAAAACTGTGTCTGGAAATGGGGCTGTGTCAGGAAAAGCGCGGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGGGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTgcg                                                                                                                                                                                     <  1:333407/238‑1 (MQ=255)
                                                aaaTCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCCGCAGGAGGGGATGAAATAGGTgcgc                                                                                                                                                                                    >  1:444964/1‑239 (MQ=255)
                                                 aaTCCAAAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGGGTTGGGAAATGGGGCTGGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTAAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGTTCTTCTGAGTAGCGAAAGCTGGCAGGAAATGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCa                                                                                                                                                                                   <  1:322726/239‑1 (MQ=255)
                                                           aTTGCTTAAAGGCCACCGCCCCCGCAACAGCAATCTGTGTCTGGAAGTGGGGCTTGGTCAGGAAAAGCGCCGCGAGGACGGCGTTCCTGGCATTACTACCTATATCTTTCAAGAAACTGCCGCTCGTGGAATGTCCCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACt                                                                                                                                                                          <  1:633738/239‑1 (MQ=255)
                                                             tGCTTAAAGGCCAGCGCGGCCGCAACAGCAAACTGTGTCAGGAAATGGGGCTTGGGCAGGAAAAGCGCCGGGACGGCGGCATTCCTGGCATTACTAACTATATCTTGTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTag                                                                                                                                                                        <  1:246450/239‑1 (MQ=255)
                                                              gCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGGGCGCAAGTTTCACTaga                                                                                                                                                                       >  1:563569/1‑239 (MQ=255)
                                                                   aaGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGCAGCGAAAACTGGCAGGAAAtgctcgagaaaaccagcaggaccaaaagcacgagtggcgctgttttcaaaaccggctttaacttcatc                                                                                                                                                                  <  1:480695‑M2/239‑69 (MQ=255)
                                                                         aCCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTAACAGCAGGAGTCGATGAAAt                                                                                                                                                                                            >  1:249541/1‑207 (MQ=255)
                                                                               cccGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGAGCTCGATAAAACCGCCGCTTACCAGCAGGAGGGGATGAAATGGGGGCGCAAGTTTACCTAGAGTTACATCACCGCATTa                                                                                                                                                      >  1:957640/1‑239 (MQ=255)
                                                                                     acagaaagtggtgtTTGGAAGTGGGGCTTTGTCAGGAAAGGCGCCGCGACGACGGCATTCCGGGCCTTGCTACCTATATCTTTTCGGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGGGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGt                                                                                                                                                <  1:945172/229‑1 (MQ=255)
                                                                                         cAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGCAAGCTGGCAGGAAGTGCTCGATAAAAACGCACTTTCCCACCCGCAGGGGGTGAAATGAGGGCGCAAGTTTCACAAGAGTTAAATCACCCCATTAGCCAGgtt                                                                                                                                              >  2:474794/1‑237 (MQ=255)
                                                                                                tgtCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCAc                                                                                                                                     >  1:501375/1‑239 (MQ=255)
                                                                                                          tGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCCCTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCt                                                                                                                           >  1:564222/1‑239 (MQ=255)
                                                                                                            gggCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTGACCAGTTTTTCTTTTACGAAGCCACCt                                                                                                                           >  1:1049398/1‑237 (MQ=255)
                                                                                                              ggttggTCAGGAAAAGCGCCGCGAAGGCGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGtgctcgagaaaaccagcaggaccaaaagcacgagtggcgctgttttcaaaagcggctttaacttcatcggaggcggctttgtcagtaatacagaacgcccacacttcaac                                                                                                                        >  2:480695‑M2/3‑128 (MQ=255)
                                                                                                                ttGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGCTGAAATGCGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTgg                                                                                                                     >  1:533086/1‑239 (MQ=255)
                                                                                                                 tggttgggAAAAGCGCCGCGACGACGGCATTCCCGGCATTCCTAACTATATCTTTTCTGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTCCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGga                                                                                                                    <  1:405192/233‑1 (MQ=255)
                                                                                                                          aaaggcccgcGACGTCGGCATTCCTGGAAGTCCTAACTTATCTTTTCAAGAAACTGGCGCCAGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCGGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGa                                                                                                            <  1:265042/232‑1 (MQ=255)
                                                                                                                          aaaGCGCCCGGACGACGCCATTCCTGGCATTACTAACTATATCTTTTCAGAAACGGCCGGTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGa                                                                                                            <  2:909238/238‑1 (MQ=255)
                                                                                                                              cgccgcGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGCCGACTGGAAAtt                                                                                                        >  1:540132/1‑238 (MQ=255)
                                                                                                                                    gacggcGGCATTCCTGGCATTACTAACTATATCTTTTAAGAAACTGCCGCTCGTGGAATGTCCCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGa                                                                                                  <  1:844493/238‑1 (MQ=255)
                                                                                                                                                         ttttcctttttCTTTTCAAAAACGGCCGCCTGTGGAATGTCCCAACGGGGGGCCGACCTTTTGGGTAGGAAAAGGTGGAAGGAAGTGCCGGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGaa                                                                            <  2:564222/229‑1 (MQ=255)
                                                                                                                                                            actttttttttttCAGAAACGGCCCGCCGGGGAATTTACCAAGCTTGGGCCGACTTTTTGAGTAGCGAAAGGGGGCAGGAATGGCCCGAAAAACCCGCCGCTTACCAGCAGGAGGTGATGAAAGGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAagag                                                                         <  2:796028/230‑1 (MQ=255)
                                                                                                                                                            actttttttttttCAAAAACTGCCGCCCGTGGAGTGTCCCAACGCGGGGCGGATCTCCTCAGAAGGGAAGTCGGGCAGGAGTGGCCCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAAGGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAagag                                                                         <  2:103292/230‑1 (MQ=255)
                                                                                                                                                            actttttttttttAAGAACCTGCCGCCCGTGGAATGTCCCACCGCTGGGCCGATCTTCTGAGTAGCGAAGGCTGGCAGGAAGTGCTCGAAAAACCCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAagag                                                                         <  2:1049398/230‑1 (MQ=255)
                                                                                                                                                            aactaTTTTTTTTCAGAAACTGCCGCCTGGGGAATGTGCAAGCGGTGGCACGATCTTCTGAGGAGAGAAAGGTGGCAGGAGGGGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTCTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGAGACTGGCTGGCGCAGCTCGACGAagag                                                                         <  2:412407/239‑1 (MQ=255)
                                                                                                                                                             attataTTTTTTCAAAACCTGCCCCTCGTGGAATGTACCAACGCTGGGCCGTTCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCCCGAAAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAgaga                                                                        <  2:501375/237‑1 (MQ=255)
                                                                                                                                                              ctaTATCTTGTCAGAAACGGCCGGTCGGGGAATGGACCAGCGCTGGGGCGATCGTCGGAGTAACGAAAGCGGGCAGGAAGTGACCGAAAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGAt                                                                       <  1:994613/239‑1 (MQ=255)
                                                                                                                                                              ctaTATCCTTACAGAAACGGCCGGTCGTTGAATGTAACAGCGTGGGGCCGATCGTCTGAGTAGCGAAAGCGTGCAAGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGAt                                                                       <  1:372667/239‑1 (MQ=255)
                                                                                                                                                                  atCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGt                                                                   >  1:279567/1‑239 (MQ=255)
                                                                                                                                                                       ttCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCCGGGGCAGCTCGACGAAAAGATTCGTTtca                                                               >  1:156630/1‑238 (MQ=255)
                                                                                                                                                                                               agccccAACGCTGGCCCCATCTTCTGAGTCGCGAAAGCTGGCAGGAGGGGCTCAGAAAATCCGCCGCTTCCCAGCAGGAGGTGATTAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACgcgc                                      <  2:685201/235‑1 (MQ=255)
                                                                                                                                                                                                       cGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACAcgc                              >  1:64149/1‑239 (MQ=255)
                                                                                                                                                                                                           gggCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTTGCGCAGCTCCACGAAGAGATTCGGTTCACCATGCCCCCCACAGTTAACGCGCcaaaaaccgaac                          >  2:228418/1‑230 (MQ=255)
                                                                                                                                                                                                           gggCCGATCTTCTGAGTAGCGAAAGCTGCCAGGAAATGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGACAATTTCGTGACTGGCTGGCGCAGCTCGACGAACAGATTCGTTACACCATCCGCACCACAGGTAACACGCAAACACGCGAc                           >  1:343412/1‑238 (MQ=255)
                                                                                                                                                                                                                 aTCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCCCGACGAAGAGATTCGGTAAACCATGCCCACACAAGGTAAAGCGCCAAAAACGCACCGGCGCa                    >  2:383637/1‑239 (MQ=255)
                                                                                                                                                                                                                         aGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCCAAAACCCGACCCCCCCAAAAGCgcc            >  2:155341/1‑237 (MQ=255)
                                                                                                                                                                                                                           tAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACAcc                                                             <  1:772159/189‑1 (MQ=255)
                                                                                                                                                                                                                           tAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTAAAcc                                                             >  2:772159/1‑189 (MQ=255)
                                                                                                                                                                                                                              cGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTCCACCATGCGCACCCCAGTTAACCCGCAAAAACGCGACCGCCCCAAAGGCGTCCAGc        >  1:89550/1‑238 (MQ=255)
                                                                                                                                                                                                                              cGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAAAGATTCGTTACACCATGCGCACCCCAGTTAACGCGCAAACACGCGACCCCCCCAAAGGCGTCCAGc        >  1:1011307/1‑238 (MQ=255)
                                                                                                                                                                                                                                aaaGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCGACCGCCGCAAAGGCGTCCAGCCa      >  1:1086045/1‑238 (MQ=255)
                                                                                                                                                                                                                                     tGGGAGGAGGTGCTAGAAAAACCCCCCGTCTCCCAGCAGGAGTTGAGAAAATGTGTGCGAATGTTCCCTTAAGGTTCCTTCCCCCAATGAGCATGTTTCTCTTTCCGGGAGCGAGCTTGCTGGACGACTGGAAATTTCGTGACTGGCGGGGCGAGCTCGAAGAAGAGTTCCGTTACCCCATCCCCCCCACATTTACCGCCCAAACCCCCGACCGCCGCAAAGGCGTCCAGCCACCGa  <  2:156630/237‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                    
TTGGTCCTGCTGGTTTTCTCGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCGACCGCCGCAAAGGCGTCCAGCCACCGA  >  NC_000913/2670113‑2670576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.