Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,460,838	T→C	11.6%	L341P (CTC→CCC)	gspF →	general secretory pathway component, cryptic

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,460,838	0	T	C	11.6%	210.9 / 2.5	91	L341P (CTC→CCC)	gspF	general secretory pathway component, cryptic
Reads supporting (aligned to +/- strand):  ref base T (42/35);  new base C (9/5);  total (51/40)
Fisher's exact test for biased strand distribution p-value = 5.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTAACAGCGCACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGG  >  NC_000913/3460601‑3461071                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          ttAACAGCGCACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GCCGAAAAAAGCGGGCAGCTc                                                                                                                                                                                                                                          >  1:814776/1‑239 (MQ=255)        cgcACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGACAGTTCGCCAAGG‑GAACACCATTAAACTTT‑CCCTGGAACAAACCGCAAATT‑T‑CCCGCCGATGAAGCT‑CCAAATGTCGGCCTTT‑GGCCAAAAAAACGGGCACCCCggaccca                                                                                                                                                                                                                                   >  2:382256/1‑234 (MQ=255)         gccgtttgtctcCGCTTTTTTAGATTTTTGCAGCCCAGGCTCGT‑CCTCT‑GGTGGGTGGTGAGAATGTGGTCCCCCGAAACCCTAACCACCCTAGAATTCCCCCAGGGTCTGAAAAAGGCGGAAGGGACCTTCCGCGA‑GG‑TAACGACTTTCCTTTTTCCGGTGGAAAAACCCGCATTTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGca                                                                                                                                                                                                                                      <  2:171478/227‑1 (MQ=255)         gcACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGACCAAAACGCAATTT‑T‑CCCGCCGCTGATGCC‑CTACATGGGGGCCCCT‑GGCGAAAAAAGCGGGCACCCGGGCACAta                                                                                                                                                                                                                                  >  2:297851/1‑238 (MQ=255)         gcACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGGTGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCACCTCGGCACAtt                                                                                                                                                                                                                                  >  2:840025/1‑239 (MQ=255)         gcACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCC‑CTACATGGTGGCCCCT‑GGCGAAAAAAACGGGAAACTCGGCAAAta                                                                                                                                                                                                                                  >  2:173566/1‑238 (MQ=255)          cACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCAACTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAACCGGGCAGCCCGGCACtttc                                                                                                                                                                                                                                 >  1:218585/1‑238 (MQ=255)                     cGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCACCCCGGCACATAAAAGGGCagag                                                                                                                                                                                                                       >  2:559459/1‑238 (MQ=255)                       cACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGCAAAAAGCGGGCACCCCGGCCCATTAATGGGCAGAGCCg                                                                                                                                                                                                                    >  2:292836/1‑239 (MQ=255)                       cACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCCGCTCGGCCCATTAATGGGCacggcc                                                                                                                                                                                                                     >  2:623326/1‑233 (MQ=255)                         cTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCGAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTCCATGGTGGCCTCT‑GGCGAAAAAAACGGGCACCCCGGCACATTAATGGTCAAAGCCGCa                                                                                                                                                                                                                  >  2:977914/1‑239 (MQ=255)                          tttAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAg                                                                                                                                                                                                                 >  1:132912/1‑239 (MQ=255)                           ttAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGa                                                                                                                                                                                                                >  1:357073/1‑239 (MQ=255)                            taattttttcGCAATCCAGGGGCCTCCCTCG‑GCTGGATGGGATGAAT‑TTGCCCACCGAAAGCCTCAACACCCTCAAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGAt                                                                                                                                                                                                               <  1:173566/233‑1 (MQ=255)                            tAAGTTTTTTGCAACCCGGGGGCGT‑CCTCTGGCGGGGTGGGATTAAT‑TTGCCCACCGAAAGCCTCAACACCCTCGAAATCCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑AAACAGCATTCATCTTT‑CGCTGGAACAACCCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGAt                                                                                                                                                                                                               <  1:559459/239‑1 (MQ=255)                            tAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGACATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTAAAAACCGCCGAt                                                                                                                                                                                                               >  2:96407/1‑239 (MQ=255)                                  ttttGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCACCTCGGCCCATTAATGGTCAGAGCCGccaaaaacaag                                                                                                                                                                                                         >  2:999866/1‑229 (MQ=255)                                    ttGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCTGCTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCCCGGCACATTAATGGTCAGAGCCGCAGATAACCAgg                                                                                                                                                                                                        >  1:571877/1‑239 (MQ=255)                                    ttGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGGCAGAGCCGCAGATAACCAGga                                                                                                                                                                                                       >  1:1039971/1‑239 (MQ=255)                                    ttGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGACGCT‑CTACATGTTGGCCTCT‑GGCGAAAAAAGCGGGAAGCTCGGCACATTATTGGTCAGAGCCGCAACTAACCAgca                                                                                                                                                                                                       >  1:312033/1‑237 (MQ=255)                                          tCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCCGATAACCAGgaga                                                                                                                                                                                                     >  1:937700/1‑235 (MQ=255)                                          tCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGacac                                                                                                                                                                                                  >  1:805990/1‑238 (MQ=255)                                          tCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGAGGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGAAGCTCGGCACATTAATGGTAAGAGCCGCAGATAAACAGGGGacac                                                                                                                                                                                                  >  2:1022995/1‑238 (MQ=255)                                            cAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCCCT‑GCCGAAAAAACCGTGCAGCCCGGCCAATTAATGGTCAAAGCCGCAGATAACAAgaaaaaacccc                                                                                                                                                                                               >  2:478069/1‑229 (MQ=255)                                                      ccTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGTTAACCAGGAGACACTCCAACAAAATCg                                                                                                                                                                                     >  1:398180/1‑239 (MQ=255)                                                      ccTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACATTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCC‑CTACATGGTGGCCTCT‑GGCGCAAAAAGCGGGCAGCCCGGCCCATTAATGGCCCGAGCCGCCGAAAACCAGAAAACCCCCCACCAAAACCg                                                                                                                                                                                     >  2:472568/1‑239 (MQ=255)                                                         ct‑ggtgGAGGGGATGATT‑TTGCCCACCGAAAGCCACAACAACCGAGAAATTCGCCAGCGTCTGGCAATGGCGGCAGAGAACGTCCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAACCCGAAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGAt                                                                                                                                                                                  <  1:706008/239‑1 (MQ=255)                                                         ct‑gctgGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGa                                                                                                                                                                                   >  1:50310/1‑238 (MQ=255)                                                             ctgGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCg                                                                                                                                                                                >  1:411403/1‑238 (MQ=255)                                                                gatgggatgAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCGGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCtt                                                                                                                                                                            >  1:860517/1‑239 (MQ=255)                                                                     gatgAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACAACCCAACAAAATCGGATCGCCTTAACg                                                                                                                                                                        >  1:495383/1‑238 (MQ=255)                                                                               gTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCATAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCACCt                                                                                                                                                              >  1:473114/1‑239 (MQ=255)                                                                                tCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAAACACTCCACCCAAATCGGATCGCCTTAACGTTCTCCATCt                                                                                                                                                              >  1:689171/1‑238 (MQ=255)                                                                                     cGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGCCACATTAATGGTCAGAGCCGCAGATACCCAGGAGCAACTCCAACAAAATCGGATCGCCTTAACGGTCTCCAACTCCggg                                                                                                                                                         >  1:990806/1‑236 (MQ=255)                                                                                          gCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGACAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGGGACACCCCAACAAAATCGGATAGCCTTAAAACCCCACATCTTCGAGACCGCa                                                                                                                                                   >  2:478505/1‑239 (MQ=255)                                                                                            ccaaacaacCCAGAAATGCGCCGGCGTCGGGAAAAGGCGGCAGGGAACGTTGGCCAGGG‑TAACGGCATTCATCTTC‑CGGTGGAACAACCCGAAATTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCCCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACt                                                                                                                                                 <  1:977914/236‑1 (MQ=255)                                                                                               aacaacCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAACACCGGGCAGCTCGGCACATTAATGGCCAGAGCCGCAGATAACAAGGGGACACTACAACAAAAACGGCTCGCCTTTACGCCCTCCCACTTCGAAcccgaccccct                                                                                                                                              >  2:589892/1‑230 (MQ=255)                                                                                                     cTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCGGATAACCAGAAGACACTCCACCAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTAc                                                                                                                                        >  2:928617/1‑239 (MQ=255)                                                                                                       cGAAATTCCGCAGCGTCTGGCAAGTGCGGCAGAGAACGTTCGCCGGGG‑TAACAGCTTTCCTTTTG‑CGGTGGAAAAACCCGAAATTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGa                                                                                                                                      <  1:292836/239‑1 (MQ=255)                                                                                                                      cttcgCAAATCCGGGCAAGACCCTTCGCCCGGGTTAACA‑CGTTCCTCTTG‑CGGCGGAACAAACCGCTATTTGC‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTc                                                                                                                        <  2:495383/235‑1 (MQ=255)                                                                                                                           cAAAGGCGGAAGAGACCGTTCCCCGGGT‑AAACAGCATTCATCTTG‑CGGTGAAACAAACCGAATTTT‑G‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGtt                                                                                                                   <  1:999866/238‑1 (MQ=255)                                                                                                                               tGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGAAGACACTCCCACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTTTTACGATGGCACTGATCGCCCTGTTTAttt                                                                                                              >  2:676330/1‑238 (MQ=255)                                                                                                                                         gtttgtccgcgggg‑TAACTGCATTTTTTTTT‑GGCAGAAACAACCCGAATTTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCgg                                                                                                     <  2:411403/227‑1 (MQ=255)                                                                                                                                                           cAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGCCGGTACTCCAACCGCttcttc                                                                                   >  1:116777/1‑239 (MQ=255)                                                                                                                                                           cAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACCCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCACCCCcttttta                                                                                   >  2:543311/1‑238 (MQ=255)                                                                                                                                                                ttCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTACCGCTCTCCATCTTCGAGCCAGCACTCCTTATTACGATGGCACTGATCGTCCTGTTTATTTTCTTTTCGGTACTCCAAACTCTTCCTCaaata                                                                              >  2:478293/1‑236 (MQ=255)                                                                                                                                                                ttCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACtt                                                                              >  1:86801/1‑239 (MQ=255)                                                                                                                                                                 tCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACCCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCTGGTCGGTACTCCAACCCCCACTTCAAATTa                                                                             >  2:2084/1‑239 (MQ=255)                                                                                                                                                                    tCTTT‑CGCGGAAACAACGCTGAATTT‑C‑CCCGCCGATTATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCACCAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACt                                                                          <  1:472568/239‑1 (MQ=255)                                                                                                                                                                     ttttgtcgcggAACAAACCCGAATTT‑TCCCCGCCGATGATGCT‑CTACTTGGGGGCCTCT‑GGCGAAAAAAGCGGGCAGGTCGGCACATTAATGGCCAGAGCCGCAGATAACCAGGGGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAAc                                                                           <  2:1062956/230‑1 (MQ=255)                                                                                                                                                                      ttt‑CGCGGGAACACCCCGTAATTT‑G‑CCCGCCGATGATGCT‑CTACATGGTTGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCa                                                                        <  1:840025/239‑1 (MQ=255)                                                                                                                                                                        t‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTAGGGCCGGTAACCCAACCTCTTTTTCAACTTAACTCAAt                                                                      >  2:472657/1‑239 (MQ=255)                                                                                                                                                                           ccgcaacaaaaCCCCAATTTCC‑CCCGCCGATGATGCT‑TTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGGGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATg                                                                     <  2:840957/231‑1 (MQ=255)                                                                                                                                                                                 aaacacccaatttt‑t‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGattaatt                                                              <  1:297851/228‑1 (MQ=255)                                                                                                                                                                                 aaaaaCCGAAATTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGattaatt                                                              <  1:904522/237‑1 (MQ=255)                                                                                                                                                                                    agccGAAATTT‑C‑CCCGCGGGTGATGCT‑TTACATGGTGGCCTCG‑GGCGAAAAAATGGGGCAGCCAGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACCCTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAg                                                           <  2:86801/237‑1 (MQ=255)                                                                                                                                                                                     aCCCCAATTT‑TGCCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCCCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAg                                                           <  1:645971/239‑1 (MQ=255)                                                                                                                                                                                      cggaaaTTT‑T‑CCCGCCGATGAGGCT‑CTACATGGTGGACTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGGTAACCAGGAGACACTCCAACAAAATCGGATCGGCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTACTTCAACTTAACTCAATGATTAATTAAGGa                                                         <  1:599225/235‑1 (MQ=255)                                                                                                                                                                                      cccaaaTTT‑C‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGa                                                         <  1:1022995/235‑1 (MQ=255)                                                                                                                                                                                      ccaattttt‑c‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGa                                                         <  2:24007/233‑1 (MQ=255)                                                                                                                                                                                      ccaaatttt‑c‑CCCGCCGATGATGCC‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGGCACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGa                                                         <  1:478293/233‑1 (MQ=255)                                                                                                                                                                                          aaTTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTACCTCAATGATTAATTAAGGAAAGc                                                     >  1:24007/1‑239 (MQ=255)                                                                                                                                                                                                   ccgcctgttgtgCT‑CTACATGGTGGCCGCT‑GGCGAAAAAAGCGGGCAGCTCGGCAACTGAATGGTCAGAGTCGCCTATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCCCTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCGTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATgcg                                              <  2:132912/229‑1 (MQ=255)                                                                                                                                                                                                      ccgATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATgcgcgc                                           <  1:433106/239‑1 (MQ=255)                                                                                                                                                                                                        gatgatGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCaa                                         <  1:623326/239‑1 (MQ=255)                                                                                                                                                                                                                   tACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCAAATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTcttctt                                                                                    <  1:526496/186‑1 (MQ=255)                                                                                                                                                                                                                     cATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACACCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCAAATGCGCGCAACGGATAAGCAAc                             >  1:773283/1‑239 (MQ=255)                                                                                                                                                                                                                      ttggtggCCCCT‑GGGGAAAAAAGCGGGCAGCTCGGCAAATTAATGGTCAGGGCCGCAGATAACCAGGAGACACCCCAACAAAATCGGAACGCCTTAACGCTCCCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCGCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAAcg                            <  2:510032/238‑1 (MQ=255)                                                                                                                                                                                                                      gtggtgg‑CTCTGGGCAAAAAAAGCGGGCCCCCCGGCACATTAAGGGTCAGAGACGCAGATAACCAGGTGACACTCCAACAAAATCGGATCGCCTTTACGCTCTCCATCGTCGAGCCAGCACTCATTATTTCGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAAcg                            <  2:218585/238‑1 (MQ=255)                                                                                                                                                                                                                      cgtggggCCTCT‑GGCGAAAAAAGGCGGCCGCCCGGCACATTAATGGTCAGACCCTCAGATAACCAGGAGACCCTCCAACAAAATCGGATCGGCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTATTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAAcg                            <  2:416484/234‑1 (MQ=255)                                                                                                                                                                                                                      aTGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAAcg                            <  1:676330/239‑1 (MQ=255)                                                                                                                                                                                                                          tggCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACAtt                                                                                                                                                                                                                                  >  1:108870/1‑37 (MQ=255)                                                                                                                                                                                                                          tggCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAACATATGGCCGCAACGGATAAGAAACGCGGt                        >  2:593315/1‑239 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTCTTACGATGGCACTGCTCGTCCTGTTTATTGTCGTTCCGTTCCTCCAACCTCTTCTTCAACTTAACTCATTGATTCATTAAGGAAAGCATATGCGCGCAACGGAAAAAGAACACGGgtta                     >  2:313221/1‑238 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTTTTTATTGCCGTGTCGGTCCTCCAACCTCTTCTTCAACTTAACt                                                                          >  2:526496/1‑186 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGat                                                                   >  1:313346/1‑193 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGat                                                                   <  2:313346/193‑1 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGTTAAGCAACGCGGttt                      >  1:905369/1‑238 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACCCGGtttt                     >  2:909154/1‑239 (MQ=255)                                                                                                                                                                                                                             ccTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACCCGGattt                     >  1:208380/1‑239 (MQ=255)                                                                                                                                                                                                                                ct‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTcttctt                                                                                    >  1:282188/1‑173 (MQ=255)                                                                                                                                                                                                                                ct‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTcttctt                                                                                    <  2:282188/173‑1 (MQ=255)                                                                                                                                                                                                                                      gAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACCCTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACt             <  1:543311/239‑1 (MQ=255)                                                                                                                                                                                                                                      caaaaaaGCGGCCCGCTCGGCCCATTAATGGTCAGGGCAGCAGATAACCAGGAGACCCTCCAACAAAATCGGGTTGCCTTAACGCTCTCCATCTTCGAGCCAGCCATCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACt             <  2:860171/238‑1 (MQ=255)                                                                                                                                                                                                                                       aaaaaaGGGGGCAGCTCGGCACATTAATGGTCAGCGCCGCAGATAACCAGGAGACACTCCAACAAAAGCGGATCGCCTTCACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACt             <  2:744271/238‑1 (MQ=255)                                                                                                                                                                                                                                       aaaaaaGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACCCTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACt             <  1:96407/238‑1 (MQ=255)                                                                                                                                                                                                                                       aaaaaaGCGGGAAGCTCGGCAAATTAATGGTCAGAGCCGCAGATAACCAGGAGCCACTCCAACAAATTCTGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACt             <  2:172104/238‑1 (MQ=255)                                                                                                                                                                                                                                         aaaggggggCAGCTCGGAAAATTAATGGTCACGGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTTGACCCAGCACTCATTATTACGTTGGCACTGATCGTCCTGTTTATTGTCGTGTGGGTTCTGCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGa          <  1:382256/233‑1 (MQ=255)                                                                                                                                                                                                                                         aaaaGGGGGCAGTTCGTGACATTAATGGTCAGGGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGa          <  1:375970/239‑1 (MQ=255)                                                                                                                                                                                                                                         aaaaGGGGGCAGCTCGGCCAATTAATGTTCAGAGCCGCAGATAACCAGGAGACCCTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGa          <  2:116777/239‑1 (MQ=255)                                                                                                                                                                                                                                                  cAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCCGGAGGCCCTCCAACTAAACCGGAACGCCTTAACCGTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGGCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTAtgg  <  1:22701/238‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          TTAACAGCGCACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCT‑GCTGGATGGGATGAAT‑TTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGG‑TAACAGCATTCATCTTT‑CGCTGGAACAAACCGCAATTT‑T‑CCCGCCGATGATGCT‑CTACATGGTGGCCTCT‑GGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAAGGAAAGCATATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGG  >  NC_000913/3460601‑3461071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑