New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 411642 =51 (0.900)3 (0.050) 3/494 NT 6.0% coding (840/1185 nt) araJ L‑arabinose‑inducible putative transporter, MFS family
?NC_000913 411680 = 44 (0.800)coding (802/1185 nt) araJ L‑arabinose‑inducible putative transporter, MFS family

AGGGCGGCAGGCAGCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCACCCAAAAATAGACC  >  NC_000913/411394‑411963
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                           
aGGGCGGCAGGCAGCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCa                                                                                                                                                                                                                                                                                            <  1:249047/288‑1 (MQ=255)
     ggcaggcaGCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATgcg                                                                                                                                                                                                                                                                                       <  2:446018/288‑1 (MQ=255)
       caggcagCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     <  2:335188/288‑1 (MQ=255)
       caggcagCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     <  1:236204/288‑1 (MQ=255)
       caggcagCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     <  2:56284/288‑1 (MQ=255)
       caggcagAGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     <  1:171693/288‑1 (MQ=255)
                                cAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCCCCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCt                                                                                                                                                                                                                                                            >  2:485715/1‑288 (MQ=255)
                                  gCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     >  1:85053/1‑261 (MQ=255)
                                  gCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCa                                                                                                                                                                                                                                                                                     <  2:85053/261‑1 (MQ=255)
                                  gCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGcc                                                                                                                                                                                                                                                         >  1:124277/1‑289 (MQ=255)
                                     ccAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACt                                                                                                                                                                                                                                                      <  2:244624/289‑1 (MQ=255)
                                          gTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCGCTGCTGCAATGCGCAGTGGTGAATGACGTCCTGAAATCCTGCCACTTAGCa                                                                                                                                                                                                                                                 <  1:377562/289‑1 (MQ=255)
                                            cAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCata                                                                                                                                                                                                                                               <  1:158709/289‑1 (MQ=255)
                                             gccgtgtttaattttcgccgccacgatgtttggcaacgcaggtgtgtttgcctggtgcagctacgtaaagccatacatgatgtttatttccggtttttcgggaacggcgatgacctttattatgatgtgagttgggctagggatggtgctgggaaatatgctaagtggcaggatttcaggacgttattcaccactgcgcattgCAGCAGTGACTGACTTTATAATTGTACTGGCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCata                                                                                                                                                                                                                                               >  1:445904‑M1/204‑288 (MQ=255)
                                             aGCATCCTACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACGCTCCGCCTGTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCata                                                                                                                                                                                                                                               <  2:41835/288‑1 (MQ=255)
                                                 tcatACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTcc                                                                                                                                                                                                                                          <  1:219057/289‑1 (MQ=255)
                                                  catACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTccc                                                                                                                                                                                                                                         <  1:316740/289‑1 (MQ=255)
                                                       cTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCAc                                                                                                                                                                                                                                    <  1:182327/289‑1 (MQ=255)
                                                            cAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTACATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATc                                                                                                                                                                                                                                >  2:283088/1‑288 (MQ=255)
                                                             aaTATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATccc                                                                                                                                                                                                                              <  1:228439/289‑1 (MQ=255)
                                                               tatGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGGTAATAACGTCCTGAAATCCTGCCCCCTAGCATATTTCCCAGCCACATCCCt                                                                                                                                                                                                                             >  2:285406/1‑288 (MQ=255)
                                                                    gcCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGCAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAAGTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAAAGTCATGAAATCCTGCCACTAAGCATATTTCACAGCACCATACCTAGCCCa                                                                                                                                                                                                                       >  1:508641/1‑289 (MQ=255)
                                                                         cGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTaa                                                                                                                                                                                                                  <  2:124277/289‑1 (MQ=255)
                                                                                           aCGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCATGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATAATAATAAAGGTCa                                                                                                                                                                                                 >  1:368891/1‑288 (MQ=255)
                                                                                                         ccTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGaaa                                                                                                                                                                                  >  2:310608/1‑289 (MQ=255)
                                                                                                                             tcCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATaa                                                                                                                                                                      <  1:409004/281‑1 (MQ=255)
                                                                                                                             tcCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATaa                                                                                                                                                                      >  2:409004/1‑281 (MQ=255)
                                                                                                                                     tGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCtt                                                                                                                                                      >  1:14404/1‑289 (MQ=255)
                                                                                                                                         gTTTTGTAGTAACAAGATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTAc                                                                                                                                                   <  1:326730/288‑1 (MQ=255)
                                                                                                                                            ttGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAg                                                                                                                                               <  1:283088/289‑1 (MQ=255)
                                                                                                                                                            tGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAAc                                                                                                                                         >  1:243517/1‑279 (MQ=255)
                                                                                                                                                            tGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAAc                                                                                                                                         <  2:243517/279‑1 (MQ=255)
                                                                                                                                                                gCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAacacac                                                                                                                            >  2:267141/1‑288 (MQ=255)
                                                                                                                                                                   gTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCAGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTg                                                                                                                         <  1:180461/288‑1 (MQ=255)
                                                                                                                                                                                agttgggctagggatggtgctgggaaatatgctaagtggcaggatttcaggacgttattcaccactgcgcattgcagcagtgactgactttataattgtactggcactgctgCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTa                                                                                                                                                                                                                                                    >  1:222107‑M2/113‑154 (MQ=255)
                                                                                                                                                                                agttgggctagggatggtgctgggaaatatgctaagtggcaggatttcaggacgttattcaccactgcgcattgcagcagtgactgactttataattgtactggcactgctgCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTa                                                                                                                                                                                                                                                    <  2:222107‑M2/42‑1 (MQ=255)
                                                                                                                                                                                           cgcAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAAca                                                                                                                                                                   >  2:223648/1‑222 (MQ=255)
                                                                                                                                                                                           cgcAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAAca                                                                                                                                                                   <  1:223648/222‑1 (MQ=255)
                                                                                                                                                                                                    tAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCa                                                                                       <  2:393929/289‑1 (MQ=255)
                                                                                                                                                                                                           tatgctaagtggcaggatttcaggacgttattcaccactgcgcattgcagcagtgccagtacaattataaagtcagtcactgctgCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTCACATCATAATAAAGGTCATCGCCGTTCCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGCACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAAACAcggc                                                                                   >  1:445904‑M2/86‑287 (MQ=255)
                                                                                                                                                                                                              taagtggcaggatttcaggacgttattcaccactgcgcattgCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACt                                                                                                                                                                                                                    <  2:222107‑M1/112‑1 (MQ=255)
                                                                                                                                                                                                              taagtggcaggatttcaggacgttattcaccactgcgcattgCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACt                                                                                                                                                                                                                    >  1:222107‑M1/43‑154 (MQ=255)
                                                                                                                                                                                                                   gCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGgcggcg                                                                                                  >  2:370132/1‑263 (MQ=255)
                                                                                                                                                                                                                   gCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGgcggcg                                                                                                  <  1:370132/263‑1 (MQ=255)
                                                                                                                                                                                                                    cGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTgcg                                                                        >  1:234073/1‑288 (MQ=255)
                                                                                                                                                                                                                                        cgcAGAAAAAGAGCAGCAGCAGTGCCAATACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTcgc                                                    <  2:124457/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               gcaaGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCTTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCtcgt                               <  1:267141/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aTTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGAt                                              >  2:490631/1‑262 (MQ=255)
                                                                                                                                                                                                                                                                        aTTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGAt                                              <  1:490631/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aaaGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCAcc              <  1:341747/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aaaGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCAcc              <  2:14404/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     agtcaCTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCACCCaaaaa        >  1:464952/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                           tgctgCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCACCCAAAAATAGAcc  <  2:464952‑M2/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                           
AGGGCGGCAGGCAGCGCCACGTAATTATATGCCAGCCCCAGCGTCAGCATCATACCTCCGCAATATGCGCCGACGGCGCTACCGAGGTTAAACGCTATTTGCCCACCTGCGGCACCTAATAACTCTCCGCCTTTGGCGTTTTGTAGTAACAATATTTGTAGCGGTGCTGAAAGGGCAAATAATCCCGCGCAACAAATAAAAGCAAAAATAAGCGACGTTGTTTTCATGCCGCCGCAGAAAAAGAGCATCAGCAGTGCCAGTACAATTATAAAGTCAGTCACTGCTGCAATGCGCAGTGGTGAATAACGTCCTGAAATCCTGCCACTTAGCATATTTCCCAGCACCATCCCTAGCCCAACTAACATCATAATAAAGGTCATCGCCGTTTCCGAAAAACCGGAAATAAACATCATGTATGGCTTTACGTAGCTGAACCAGGCAAACACACCTGCGTTGCCAAACATCGTGGCGGCGAAAATTAACCACGGGGCCGGGCTGCGCAAAAAGTGAAATTGTTCGCGCAGATTTCCTTTCGCCTCGTCGCGAATATCTGGCACCCAAAAATAGACC  >  NC_000913/411394‑411963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.