| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3423376 = | 83 (1.290) | 6 (0.090) | 6/280 | 8.2 | 6.8% | intergenic (+182/+47) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 3423665 = | NA (NA) | intergenic (‑10/+3) | thrV/rrfD | tRNA‑Thr/5S ribosomal RNA of rrnD operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTT > NC_000913/3423523‑3423796 | cgcgCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGAGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAtt > 1:939278/1‑143 (MQ=255) cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑Tg > 1:1051626/1‑143 (MQ=255) cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑Tg < 1:287211/143‑1 (MQ=255) gcTACCGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAATAAGTGGTGCTGATACCCAGAGTCGAACTGGGGAACTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGa < 1:181876/143‑1 (MQ=255) gtACTGCCGCCGGACAAATTCTTTTCTAATCTGCCGAAGTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGAt < 1:522488/142‑1 (MQ=255) cTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGAt < 1:250945/143‑1 (MQ=255) tGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTCTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAATT‑TGATGCCt < 2:1040621/143‑1 (MQ=255) gccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTg > 1:814509/1‑143 (MQ=255) ccgccAGACATATTCCCTTCTAATCTGCCGAACTTTAACCGAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTgg < 2:561404/143‑1 (MQ=255) gccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAAGTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCa > 1:156201/1‑143 (MQ=255) aGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGtt < 1:179263/143‑1 (MQ=255) aGACAAATTCGTTGCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAgct > 2:471306/1‑141 (MQ=255) aCAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCCGGCAGTTcc > 1:665388/1‑143 (MQ=255) aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCt > 1:1000437/1‑143 (MQ=255) aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCACCCCGCTACATT‑TGATGCCTGGCAGTTCCCt > 2:53101/1‑143 (MQ=255) ttCTTTTCTAATCTGCCGATCTTTAACCTAAAAAGTGGTGTTTATTTTTTGTGTTCTGTGCTTAACGGTACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTAct < 1:844802/143‑1 (MQ=16) ttCTTTTCTAATCTGACGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCCAAATT‑TGAGGCCTGGCCGTTCCCTAct > 1:402462/1‑143 (MQ=37) tcttctCTACTCTGCCCAACTCTAACCTGCGAATTGGGGCTTATCCCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTActc < 1:1089564/143‑1 (MQ=25) ttttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACgctc > 1:578143/1‑143 (MQ=255) tAATCCGCCCAACTTTAACCTCAAAAGTGCTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATg < 1:1011614/143‑1 (MQ=255) aaTCTGTCGAACTGTAACCTACAACGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATgg < 2:833635/143‑1 (MQ=255) aaTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATgg < 1:521589/143‑1 (MQ=255) aaTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATgg < 1:670989/143‑1 (MQ=255) aTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGCGGCGAACTGGGGACCTCACCCTGACCAAGGGTGTGCTCTACCAACTGAGCAATGTCAGCAAGCTAAATT‑GGATGCGTGGCAGTACCCGACTCTCGCATggg > 1:182850/1‑143 (MQ=255) aCTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca < 1:150395/143‑1 (MQ=255) tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca < 1:811774/143‑1 (MQ=255) aaCCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTa < 1:589477/143‑1 (MQ=255) tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGCCAGTTCCCTACTCTCGCATGGGGAGACCCCACACGAccct > 2:168930/1‑141 (MQ=255) tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGACTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCag > 1:451577/1‑142 (MQ=255) ggtGATACCCAGAGTCGAACTGGGCACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg < 1:692655/141‑1 (MQ=255) gCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg > 1:339703/1‑143 (MQ=255) gCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCCCGCATGGGGAGGCCCCACCCTACCATCGGCGCTACgg > 1:1116697/1‑143 (MQ=255) ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCAc > 1:613217/1‑143 (MQ=255) agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt > 1:1011142/1‑143 (MQ=255) agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGAGGAGACCCCACACTACCATCGGCGCCACGGCGTTTCACtc > 2:610202/1‑142 (MQ=255) agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTAATACCGCAGGTGGAGACGACATACTACCATCGGCGCTACGGCGGCTCACtt > 2:10884/1‑143 (MQ=25) agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGATAAACCAAAGCTCCCATTGCAGGGCGCTGACTTGTTATGCCT‑GCAGTTCCCTACTCTCGCCAGGGGCGGCCCCACACTACCATCGACGCTACGGCGTTTCCCtt > 1:538425/1‑143 (MQ=255) gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTAAGt > 1:589502/1‑143 (MQ=255) aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt < 1:806176/143‑1 (MQ=255) aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt > 1:380851/1‑143 (MQ=255) tgggctacTCACGCTTACCAAGTGTGCGCGCGCCCAACTCAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCACTACTCTCGCATGGGGAGACCCCACACTTCCATCGGCGCTACGTCGTTTCACTTCTGAGTTCgg < 1:479760/136‑1 (MQ=17) tGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACGACCACCGGCGCTACGGCGTTCCCCTCCAGAGTTccg > 2:621543/1‑141 (MQ=25) tccTCGCACTTAGCAAGGGTGCGCTCTACCAACTGAGTCATATCAGCATGCTAAATT‑TGATGCCTGGCAGTTCCCGACTCTCGCATGGGGAGACCCTATTCTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATgg < 2:1038301/142‑1 (MQ=18) aCCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg > 1:865930/1‑143 (MQ=255) cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCCCTTCTGAGTTCGGCGTgggg > 1:190909/1‑143 (MQ=255) cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggc > 1:148151/1‑142 (MQ=255) ttACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTCCTGAGTTCGGCATggggccgggcg > 2:586653/1‑136 (MQ=255) tACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCAGCAGGGGGTAGGGTgg > 2:505525/1‑143 (MQ=255) cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGCCGCTACGGCGTTTCACTTCTGAGTCCGGCACGGGGCCAGGTGGGac > 2:806673/1‑143 (MQ=255) gcgcTCTGCCTACTGTGCCGTATCAGCACGCTAGTTT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACGTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgcg < 2:665388/143‑1 (MQ=14) gcgcTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCATGGGGTCAGGTGGGACCACcgcg > 1:867664/1‑143 (MQ=255) cgcTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGACTTCGGCACGGGGCCAGGTGGGACCACCgcgc > 2:1087444/1‑143 (MQ=255) gcTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCATGGGGCCAGGTGGGACCACCGCGCt > 1:300062/1‑143 (MQ=255) gcTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCt > 1:635490/1‑143 (MQ=255) gcTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCt < 2:339703/143‑1 (MQ=255) tACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACgg > 2:25677/1‑143 (MQ=255) aaCTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCGGCTGCGCCCACCGCGCTCCcgccgc > 2:787787/1‑143 (MQ=17) aaCTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc > 1:1116823/1‑143 (MQ=255) aaCTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGACAGGTGGGAACACCGCGCTACGgccgc > 1:407648/1‑143 (MQ=255) cTGCGCCATATCAGCACGCTAAACT‑TGATGCCTGGCAGTTCCCTACGCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa < 1:53101/143‑1 (MQ=255) tatCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAAtt < 1:621543/143‑1 (MQ=39) gCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATCGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTggt > 1:321216/1‑141 (MQ=25) | CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATT‑TGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTT > NC_000913/3423523‑3423796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |