New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2449191 =	58 (0.590)	3 (0.030)	3/412	NT	5.5%	intergenic (+34/+37)	smrB/yfcO	putative DNA endonuclease/DUF2544 family putative outer membrane protein
	?	NC_000913	2449213 =	48 (0.510)					intergenic (+56/+15)	smrB/yfcO	putative DNA endonuclease/DUF2544 family putative outer membrane protein

CCTGCCGCCGTGAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAACCACCTGTT  >  NC_000913/2448958‑2449429                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               gtacgcagctgaatgcaacaggtggttactgccgctgggttgcacagatgataacttttaccgcgtcgggatgtgacaaggcggaagtctcggtcacgccaaatcgacaccctataacggacaaacagttacccgatatggtcgtgcgtgttgataccagcagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagctacaccacgcacg                                                                                                                                                                                                                                           <  2:524802‑M1/6‑3 (MQ=255)   acgcagatgaatgaaacaggtggttactgccgctgggttgcacagatgataacttttaccgcgtcgggatgtgacaaggcggaagtctcggtcacgccaaatcgacaccctataacggacaaacagttacacgatatggtcgtgcgtgttgataccagcagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagatacaccaGGCAggg                                                                                                                                                                                                                                          >  2:898914‑M1/232‑238 (MQ=255)    cgcagatgaatgaaacaggtggttactgccgctgggttgcacagatgataacttttaccgcgtcgggatgtgacaaggcggaagtctcggtcacgccaaatcgacaccctataacggacaaacagttacacgatatggtcgtgcgtgttgataccagcagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagatacaccaGGCAGGGGc                                                                                                                                                                                                                                        <  1:841679‑M1/9‑1 (MQ=255)      cgccgTGAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGa                                                                                                                                                                                                                                      <  1:801368/239‑1 (MQ=255)            gAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGcc                                                                                                                                                                                                                                 <  1:3842/238‑1 (MQ=255)            gAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGAGGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGcc                                                                                                                                                                                                                                 <  2:1105127/238‑1 (MQ=255)            gAACATGTGTGTTGCGCCTGCGGGATGCATGGGCGCGGGAAGTATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCGTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGcc                                                                                                                                                                                                                                 <  2:352135/238‑1 (MQ=255)                 tgtgTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCcctgcc                                                                                                                                                                                                                           <  1:225047/239‑1 (MQ=255)                 tgtgTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCcctgcc                                                                                                                                                                                                                           <  1:616065/239‑1 (MQ=255)                    gtTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTgg                                                                                                                                                                                                                        <  1:354510/239‑1 (MQ=255)                      tttGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGgtg                                                                                                                                                                                                                      <  1:821610/239‑1 (MQ=255)                      tttGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGgt                                                                                                                                                                                                                       <  1:329246/238‑1 (MQ=255)                      tttGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGgt                                                                                                                                                                                                                       <  1:531689/238‑1 (MQ=255)                      tttGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGgt                                                                                                                                                                                                                       <  1:1124677/238‑1 (MQ=255)                      gttGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAATAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGgt                                                                                                                                                                                                                       <  2:1069079/237‑1 (MQ=255)                           gcCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCt                                                                                                                                                                                                                 <  1:757397/239‑1 (MQ=255)                             gggtcggATGAAGGGGGACGGGAGGCATTATTTGAAGTAACATACACCGCTGTGGCTGGCCAAAAATCCGCATGTGATAGCCTTTCAGCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTGGAGTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCGTGAGGAGTTGAGCGGGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAAGGCCCCTGCCTGGTGTATCTa                                                                                                                                                                                                                <  2:4581/232‑1 (MQ=255)                                cGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCcctgcc                                                                                                                                                                                                                           <  1:1094141/224‑1 (MQ=255)                                  gctgggttgtacagcggagaacctttaccgagccgggatgtgacaagggggaagtctcggtcacgcaaaatcgaccccataaaacggacaaacagttacacgatatggtcgtgcgtgttgataccagaagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagatacaccaGGCAGGGGCATTCGCCCCTGCCTGGTGTATCTAAGGGCt                                                                                                                                                                                                          >  2:616488‑M1/201‑239 (MQ=255)                                     tGCATGGGCACGGGAAGCATATTTTGAATCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCGGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTAc                                                                                                                                                                                                        <  1:1117437/238‑1 (MQ=255)                                      gCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACaa                                                                                                                                                                                                      <  1:1146317/239‑1 (MQ=255)                                      gCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGGGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCCGCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATGGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACaa                                                                                                                                                                                                      <  1:578956/239‑1 (MQ=255)                                       caagcgCACTGGATGCATATTTTGAAGCATCAAACACCGCTTGGACTGGCTCAGCATCCGCATGTTATGTCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCGTGCCTGGTGTATCTAAGGGCTAcca                                                                                                                                                                                                      <  2:744640/233‑3 (MQ=255)                                            gCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCAt                                                                                                                                                                                                 <  1:1001514/238‑1 (MQ=255)                                            gCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACAGCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTAGGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCAt                                                                                                                                                                                                 <  2:937777/238‑1 (MQ=255)                                             cACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCAtt                                                                                                                                                                                                <  1:239551/238‑1 (MQ=255)                                                gggAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGt                                                                                                                                                                                            <  1:53781/239‑1 (MQ=255)                                                     ggatatTTGGAAGCAACAAAACCCGCGGTGGCTGGCTCAACATCCGCATGTGCTGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTa                                                                                                                                                                                       <  2:837507/237‑1 (MQ=255)                                                       atatTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTa                                                                                                                                                                                       <  1:1107380/237‑1 (MQ=255)                                                                             gCTGTGGCTGGCACAACATCTGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGAt                                                                                                                                                               <  1:74786/239‑1 (MQ=255)                                                                                       gcACAACATCCGCATTGGATGGCGTTTCATCAGGCACCAAAAGAGTATGGCGGGGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCGGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTCCGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGATGCATa                                                                                                                                                     <  2:680333/239‑1 (MQ=255)                                                                                                      gtgATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAaca                                                                                                                                      <  1:464054/239‑1 (MQ=255)                                                                                                        gATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAAcacg                                                                                                                                    <  1:558121/239‑1 (MQ=255)                                                                                                        gATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAAcacg                                                                                                                                    <  1:917877/239‑1 (MQ=255)                                                                                                         aTGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAAcacg                                                                                                                                    <  1:494874/238‑1 (MQ=255)                                                                                                          tGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAAcacgca                                                                                                                                  <  1:607649/239‑1 (MQ=255)                                                                                                           ggCCTTTCATCAGGGACCAAAAGAGTATGTCGGTGATGCGGCGTTTTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAAcacgca                                                                                                                                  <  1:306096/238‑1 (MQ=255)                                                                                                                ttCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTTCGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCa                                                                                                                            <  1:452632/239‑1 (MQ=255)                                                                                                                ttCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCa                                                                                                                            <  1:1146556/239‑1 (MQ=255)                                                                                                                   taacggacaaacagttacacgatatggtcgtgcgtgttgataccagcagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagatacaccaGGCAGGGGCATTCGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCa                                                                                                                                                       >  2:1027503‑M1/120‑209 (MQ=255)                                                                                                                   taacggacaaacagttacacgatatggtcgtgcgtgttgataccagcagtatgcagccaatcgattctacttgccggttccagtacatactgaatgagttgtagcccttagatacaccaGGCAGGGGCATTCGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCa                                                                                                                                                       <  1:1027503‑M1/90‑1 (MQ=255)                                                                                                                            cAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGAt                                                                                                                                                               <  1:727726/192‑1 (MQ=255)                                                                                                                              aaaGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGt                                                                                                              <  1:329779/239‑1 (MQ=255)                                                                                                                                   gTATGGCGGTTATGCGGCTGTGTGGGTGTTGATTGAAGGCGAAGAGGGGCTGCCGCCGGAGTTGCCGTGAGGAGTTGAGCGCGTGGCGCCGGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGCCCATATCGTGTACCTGATTGt                                                                                                          <  2:479865/238‑1 (MQ=255)                                                                                                                                   gTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGGGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGt                                                                                                          <  1:539071/238‑1 (MQ=255)                                                                                                                                   gTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGt                                                                                                          <  1:989248/238‑1 (MQ=255)                                                                                                                                   gTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGt                                                                                                          <  1:249861/238‑1 (MQ=255)                                                                                                                                    tATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTAt                                                                                                                                           <  1:982927/204‑1 (MQ=255)                                                                                                                                     aTGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCg                                                                                                       <  1:670149/239‑1 (MQ=255)                                                                                                                                               tGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGgtg                                                                                             <  1:50232/239‑1 (MQ=255)                                                                                                                                                              gtTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTTGGTTATCTTAGGGGTACAAATCATTCAGGATGTACTGGAACCGGCAAGGAGAATCGATTGGCTGCATTCCGCTGGTATCAACACGCACGACCATATCGTGGAACTGTTTCTCCGTTATAGGGTGTCGTCTTGGCGTGa                                                                               >  2:595417/1‑238 (MQ=255)                                                                                                                                                                 gattgaAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGGATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCga                                                                           >  1:90607/1‑239 (MQ=255)                                                                                                                                                                   ttgaAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCgag                                                                          >  1:569258/1‑238 (MQ=255)                                                                                                                                                                          cGAAGAGGGGTTGCCACAGGTGCTGCCCGGAGGAGTTGAGCGCGGTGGGCCAGGTGCGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTAGTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTAGCAACACGCACGGCCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACGTCCg                                                                   <  2:789137/238‑1 (MQ=255)                                                                                                                                                                           gAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGcc                                                                 <  1:255736/239‑1 (MQ=255)                                                                                                                                                                                 tGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTc                                                            >  1:724920/1‑238 (MQ=255)                                                                                                                                                                                         gccgGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGa                                                   <  1:4895/239‑1 (MQ=255)                                                                                                                                                                                                 tGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTGTGGGTAAGGGCAGGGGCGAATGCCCCTGCCTGGTAGATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAAGCGATTGGCGGCATACTGCTGGTATCAACACGCACGCCCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCAGACGCGGTaa                                           <  2:724920/239‑1 (MQ=255)                                                                                                                                                                                                 tGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGt                                             <  1:77598/237‑1 (MQ=255)                                                                                                                                                                                                        aggagTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTa                                     >  1:742749/1‑238 (MQ=255)                                                                                                                                                                                                            gTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTatcat                                 <  1:7089/238‑1 (MQ=255)                                                                                                                                                                                                             ttGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCACCACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGACTTGTCACATCCCGACGCGGTAAAAGTTATCATCt                               >  1:318487/1‑239 (MQ=255)                                                                                                                                                                                                             ttGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTatcatcg                               >  1:1152244/1‑238 (MQ=255)                                                                                                                                                                                                                    cgTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGGGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCaa                         >  1:1029835/1‑238 (MQ=255)                                                                                                                                                                                                                                        aTGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCCCATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAacca        >  1:524802/1‑235 (MQ=255)                                                                                                                                                                                                                                        aTGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAACCACCTg    <  1:999039/239‑1 (MQ=255)                                                                                                                                                                                                                                         tGGCAGGGGCGAATGCCCCTGCCTGGGGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAACCACCTGt   >  2:841679/1‑239 (MQ=255)                                                                                                                                                                                                                                          GGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAACCACCTGtt  >  1:847201‑M1/1‑239 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               CCTGCCGCCGTGAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGAGGAGTTGAGCGCGTTGCGCCAGGTACGGGTAATGGCAGGGGCGAATGCCCCTGCCTGGTGTATCTAAGGGCTACAACTCATTCAGTATGTACTGGAACCGGCAAGTAGAATCGATTGGCTGCATACTGCTGGTATCAACACGCACGACCATATCGTGTAACTGTTTGTCCGTTATAGGGTGTCGATTTGGCGTGACCGAGACTTCCGCCTTGTCACATCCCGACGCGGTAAAAGTTATCATCTGTGCAACCCAGCGGCAGTAACCACCTGTT  >  NC_000913/2448958‑2449429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.