New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	273987 =	NA (NA)	5 (0.090)	4/272	8.0	NA	noncoding (1163/1195 nt)	IS5	repeat region
	?	NC_000913	274057 =	NA (NA)					noncoding (1093/1195 nt)	IS5	repeat region
Rejected: Coverage evenness skew score above cutoff.

GGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCC  >  NC_000913/273845‑274094                                                                                                                                               |                                                                                                            ggggCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGCCAGCACTGTTATGGACGGTGCGAATAAGCGGGGAAGTTCTTCTCg                                                                                                             >  1:25446/1‑143 (MQ=255)    gCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGCGATGCCAGCGAACTCAGCTGTCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                          <  1:38298/143‑1 (MQ=38)    gCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                          >  1:534258/1‑143 (MQ=255)    gCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGCGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                          <  1:302323/143‑1 (MQ=255)        aGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt                                                                                                      <  1:879553/143‑1 (MQ=255)         ggCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGCCTGACta                                                                                                     >  2:624112/1‑142 (MQ=255)         ggCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCCATGAGACAACCTTTCATTAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc                                                                                                     <  1:466128/143‑1 (MQ=21)            tcgtgcGCCAACGCAGTCGGGAAGGCGAGCTGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt                                                                                                  <  2:997270/138‑1 (MQ=37)            tCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGACAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAGATGCTTCTCGGCTGACTCAGt                                                                                                  >  2:505704/1‑143 (MQ=255)                    aaaCGCTGTCGGTAGGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCTAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                                                                          <  2:327715/143‑1 (MQ=255)                    aaaCGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAAATCTTCTCCGCGGACTCAGtccttgcat                                                                                          >  2:789602/1‑143 (MQ=38)                       cGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                                                                       >  1:74784/1‑143 (MQ=255)                            tCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGCCAGCACTGTTATGGAAGGTGCGAATCAGCGGGGAAATTCTTCTCGGCTGACTCAGtcctttcattccctcct                                                                                  >  2:695178/1‑136 (MQ=37)                               ttATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                                                               >  2:729235/1‑143 (MQ=255)                               ttATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGCAATGGAAAGCGCGCACAAGCGAGGAAATGCTCCTCGGCGGACCCAGCCACTTCATGTCCTCAtcgt                                                                               >  2:991558/1‑140 (MQ=255)                                   ggCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTCCTTCATGTTTGAg                                                                           >  2:851693/1‑143 (MQ=255)                                    tggatgtGCGAGTGGCCGCAACGATGCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTGTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                                                                          <  2:705651/137‑1 (MQ=25)                                    gCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCCTCATGCTTGAGc                                                                          >  2:172256/1‑143 (MQ=255)                                           gCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGATATAGCAAGTTTTATTGAAAGAAAGCAGTTTATTCTGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGCtttt                                                                   >  2:213409/1‑143 (MQ=16)                                            cGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                                                                  >  1:241350/1‑143 (MQ=255)                                             gAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt                                                                 <  2:833053/143‑1 (MQ=255)                                                         cGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATg                                                     >  1:938930/1‑143 (MQ=255)                                                             cccGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGCGAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt                                                 <  1:513919/143‑1 (MQ=255)                                                             cccGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt                                                 <  1:210529/143‑1 (MQ=255)                                                                gCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTCGTTGCCTTgct                                              >  1:54836/1‑141 (MQ=255)                                                                gCAGGAGAAAGCCAGAAACATCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTAATTTCTTAATGTTTGAGCCGATTTTTTCTCCCGTACATGCCTTgca                                              >  2:262811/1‑141 (MQ=255)                                                                 cacgagaAAGCCAGAAACTTCGGCGCATCGCTGACAGCACTGTTATGGAAGGTGCGATTTAGCCCTTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAt                                             <  1:231920/140‑1 (MQ=18)                                                                  aGGAGAAAGCCAGAAACTGCGCGGCATCGGCGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATc                                            <  2:94379/143‑1 (MQ=255)                                                                   ggtgaAAGCCAGAAACTTGGCCGCATGGTTGCCAGCAGTGTGATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATCTCATTTCTTCATGTTTGACCCGATTTTTTCCCCCGTAAATGCCTTGAATCa                                           <  2:528387/140‑1 (MQ=17)                                                                    gagaAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                          >  2:299219/1‑143 (MQ=255)                                                                     cgagaGCCATAAACATCTCCGTACCGCTGACCGCACTTTTATGGAACGTGCGAATAAGCGGGGAAATTCTTCTCGGCTTACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAGTTTTCCTCCCGTACATGCCTTGAATCAGc                                         <  2:615021/139‑1 (MQ=14)                                                                     agaAAGCCAGAAACTCCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                         <  2:470405/143‑1 (MQ=255)                                                                      gaAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGcc                                        >  1:668219/1‑143 (MQ=255)                                                                      gaAAGCCAGAAACTTCGCCACATCGCTGACAGCACTGTTATGGAAGGCGCGAATAAGCGGGAAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTGTGAGCCGATTTTTTCTCCCGTAAATTCCTTGAATCAGcc                                        >  1:241442/1‑143 (MQ=18)                                                                       aaaGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCt                                       >  2:354675/1‑143 (MQ=255)                                                                          gCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt                                    <  1:393913/143‑1 (MQ=255)                                                                            cAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTCAATCAGCCTATTTa                                  >  2:519084/1‑143 (MQ=255)                                                                              gAAACTTCGCCGCAGCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGACTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTCGa                                <  2:972715/143‑1 (MQ=255)                                                                                           acagCTGACGGCACTGTTATGGAGCGTGCGACGACGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc                   <  2:590992/140‑1 (MQ=11)                                                                                           aTCGTTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc                   <  1:237483/143‑1 (MQ=255)                                                                                                 gACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATCCCTTGAATCAGCCTATTTCGACCGCTTCTTCGCAATTTaa             >  2:690134/1‑143 (MQ=255)                                                                                                  aCAGCTCTGTTATGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGGTTGAGCCGATTTTTTCTCCCGTAAACGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg            <  1:710566/143‑1 (MQ=255)                                                                                                   cAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTACGCCTTTTAAgg           >  1:776460/1‑143 (MQ=255)                                                                                                   aaGCATTGTTATGGAAGGTGGGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCGTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg           <  1:508660/142‑1 (MQ=255)                                                                                                      cACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCGTTTGTTCGCCATTTAAGGCGt        >  1:44387/1‑143 (MQ=18)                                                                                                          gTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc    <  2:630974/143‑1 (MQ=32)                                                                                                            tATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATccc  <  1:924329/143‑1 (MQ=32)                                                                                                                                               |                                                                                                            GGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCC  >  NC_000913/273845‑274094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.