Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)45 (0.800) 39/284 0.5 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)64 (1.130) 51/284 0.1 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 110 total aligned reads displayed.

GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173
                                                                                                                                              |                                                                                                                                             
tagtttgttTACAGTTTTGTGTGCTTTGCTTATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTTTGCAATAGCTAGGAATGTAAGGAATTCAAAATTGTTCTTTAttt                                                                                                                                               <  2:294333/139‑1 (MQ=255)
 cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagagacagaagccactggagcacctcaaaaacaccatcatacactaaataagtaagttagcagcaccacctc                                                                                                                                              <  2:792252‑M1/2‑2 (MQ=255)
  gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagcagaacaggagggaaagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaactcagtaagttggcagcctcgcctca                                                                                                                                             <  1:206703‑M1/3‑3 (MQ=255)
   ctgatgtcaggctgtgcttgtgccgttacgcaccaccacgtgagtagctgaacaggagcgacagctgttagaaacagaagccactggagcacctcaaaaacaccatcatacacaaaatcagtaagttggcagcatcaccTtgt                                                                                                                                            >  2:824117‑M1/140‑143 (MQ=255)
   ctcgtgtccggcggtgagtgtgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgt                                                                                                                                            >  2:198618‑M1/140‑143 (MQ=255)
     gatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccgtcatacactacatcagtaagctatcagcatcacctcgtgg                                                                                                                                          <  2:861499‑M1/6‑2 (MQ=255)
      atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgcc                                                                                                                                         <  1:413608‑M1/7‑1 (MQ=255)
       ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                        >  1:389679/1‑143 (MQ=255)
        gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagcgactggagcacctcaaaaacaccatcatacactaaatcagtacgttagcagcatcaccAtgtgcggc                                                                                                                                       <  2:185132‑M1/9‑4 (MQ=255)
        gtccggcggtgctcttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                       >  1:439230‑M1/135‑143 (MQ=255)
          aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                     <  1:804344‑M2/143‑4 (MQ=255)
          aGAATTTTAAGTGCTTCGCTCATTGTAGCAATCTCAAAATTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGACAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                     <  2:495338‑M2/143‑4 (MQ=255)
           gAATTTTAAGTGCTTCGCTCATGGTAGTAATCTCAAACTTATAGTGGGGTGGTTTGTTGAGGTAATAGTAGAGCATTAAATTCAGTTGTGCAATAGCCAGGAGTGTGAGGAATTGAAAATTGTGCTTTATTTTGTgcggggtg                                                                                                                                    >  1:475965/1‑137 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaa                                                                                                                                    <  1:134601‑M1/12‑1 (MQ=255)
            ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgttggcagcatcaccTTGTGCCGCCaat                                                                                                                                   <  2:1000407‑M1/13‑1 (MQ=255)
                   aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                            >  2:581932‑M2/1‑131 (MQ=255)
                     tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                          >  1:707856‑M2/1‑129 (MQ=255)
                              cATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaccttattgtt                                                                                                                 <  1:181352‑M2/143‑24 (MQ=255)
                              acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGTCAACAAATATCTCTTCATaaaa                                                                                                                 <  2:852204‑M1/31‑1 (MQ=255)
                                ttGGAGTAATCTCAAACTTATATTGTGGTGGTTTGGTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag                                                                                                               >  2:665975‑M2/1‑118 (MQ=255)
                                gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAAtt                                                                                                               >  1:988181‑M1/111‑143 (MQ=255)
                                gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAACAGCTTTTCGTAAAAtt                                                                                                               <  2:67395‑M1/33‑1 (MQ=255)
                                 ctccatcccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                              >  2:948666‑M1/110‑143 (MQ=255)
                                 catcaccccgttagtagctgaacaggatggacagctgatagacacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                              >  2:94156‑M1/110‑143 (MQ=255)
                                   tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAGTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgt                                                                                                            >  1:888777‑M2/1‑115 (MQ=255)
                                   tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttcttgatagtgt                                                                                                            <  1:535346‑M2/143‑29 (MQ=255)
                                   tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttcttgatagtgt                                                                                                            <  1:392315‑M2/143‑29 (MQ=255)
                                    caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc                                                                                                           <  1:542133‑M1/37‑1 (MQ=255)
                                    caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTATCATAAAATTAGcc                                                                                                           <  2:90842‑M1/37‑1 (MQ=255)
                                     accccgtcagaagctgaacaggagggacagctgaaagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCa                                                                                                          >  1:959332‑M1/106‑143 (MQ=255)
                                        ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATCACATTCGCcagca                                                                                                       <  1:408941‑M1/41‑3 (MQ=255)
                                        ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                       <  2:686312‑M1/41‑1 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTACGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtactgactccaacttattgatagtgttttatgtt                                                                                                    <  2:603691‑M2/143‑37 (MQ=255)
                                            cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGa                                                                                                   >  1:208361‑M1/99‑143 (MQ=255)
                                            cAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcaatcttattgatggtgttatatcttc                                                                                                   <  1:570438‑M2/143‑38 (MQ=255)
                                             aaaCTTATATGGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTGATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                                  >  1:55048‑M2/1‑105 (MQ=255)
                                              gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCCGAAacgacg                                                                                                 <  2:1016258‑M1/47‑1 (MQ=255)
                                               tatcttaagaggagggacagctgatagaaacagaagccaccggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                >  2:402978‑M1/96‑143 (MQ=255)
                                               tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAGCCAGAAAAGAcgc                                                                                                <  1:639474‑M1/48‑1 (MQ=255)
                                                 ttATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                                                              <  1:990246‑M2/143‑43 (MQ=255)
                                                 ttATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                                                              >  1:521782‑M2/1‑101 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAGCCAGAAAAGACGCGGCa                                                                                            <  1:191446‑M1/52‑1 (MQ=255)
                                                    gaactggagcgacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCat                                                                                           >  1:223210‑M1/91‑143 (MQ=255)
                                                        aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggccgcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAg                                                                                       >  1:910903‑M1/87‑143 (MQ=255)
                                                          ggtggtTTGTTGAGGTAATAAGAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                     >  1:260321‑M2/1‑92 (MQ=255)
                                                           gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                    <  1:342116‑M2/143‑53 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                <  1:875014‑M1/64‑1 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTACCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                <  2:500754‑M1/64‑1 (MQ=255)
                                                               acagcggatagaaacagaagccactggagtacctcaaaaacaccatcatacactaagtcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                >  2:1000857‑M1/80‑143 (MQ=255)
                                                                ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                               <  1:660934‑M2/143‑58 (MQ=255)
                                                                ttggtgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                               >  1:4806‑M2/1‑86 (MQ=255)
                                                                    tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                           >  1:948931‑M1/75‑143 (MQ=255)
                                                                     gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                                                          <  1:927942‑M1/70‑1 (MQ=255)
                                                                      aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                         >  2:895439‑M2/1‑80 (MQ=255)
                                                                      aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                         <  2:133365‑M2/143‑64 (MQ=255)
                                                                        agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCCTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                       >  2:142577‑M1/71‑143 (MQ=255)
                                                                            acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                                                                   <  1:874928‑M1/77‑1 (MQ=255)
                                                                               taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                >  1:729136‑M2/1‑71 (MQ=255)
                                                                                  gccactggagcacatgaacaccaccatcatacactaaatcagtaagttggtagcatcaacTTGTGTCCCCAATAAATATCTTTTCATAAAATTCGCCAGAATTGACGCGGTATATAGCCCTATTTACACCGATGATTTCgcag                                                             >  2:769798‑M1/61‑143 (MQ=255)
                                                                                   gCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                            >  1:373977‑M2/1‑67 (MQ=255)
                                                                                     cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttcttgatggtgttttatgttcagataatgcccgatgactttgtacttgagctccacggattt                                                          <  2:318321‑M2/143‑79 (MQ=255)
                                                                                     cTTAAATTCAGTGGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatggctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                          >  1:45225‑M2/1‑65 (MQ=255)
                                                                                     actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                          <  1:335415‑M1/86‑1 (MQ=255)
                                                                                       tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                        >  1:279557‑M2/1‑63 (MQ=255)
                                                                                         gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                      <  1:487735‑M1/90‑1 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccggtgagtttgtcatgcagctccactgattttgggaa                                                    <  1:411813‑M2/143‑85 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacctattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcccccgattttgagcc                                                    <  2:944038‑M2/143‑85 (MQ=255)
                                                                                            cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                   >  2:288567‑M1/51‑143 (MQ=255)
                                                                                               ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                <  2:791214‑M1/96‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGGACGTGAGGGTaaa                                               <  2:690447‑M1/97‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                               <  1:652071‑M1/97‑1 (MQ=255)
                                                                                                 caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                              >  1:988384‑M1/46‑143 (MQ=255)
                                                                                                    aaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACtt                                           <  1:924916‑M1/101‑1 (MQ=255)
                                                                                                     cacaccatcataccctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                          >  2:239540‑M1/42‑143 (MQ=255)
                                                                                                     cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtgttgcacctccaccgatactgagcgcgacaccgac                                          <  2:443398‑M2/143‑95 (MQ=255)
                                                                                                        accatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCCGCACACGACCTTCAAACTTCCTg                                       <  2:481166‑M1/105‑1 (MQ=255)
                                                                                                           atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                    >  1:659766‑M1/36‑143 (MQ=255)
                                                                                                           atcatacactaaatcagtaagttggcagcaccaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                    >  1:81630‑M1/36‑143 (MQ=255)
                                                                                                            tcatccactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                   >  2:328126‑M1/35‑143 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                   >  1:23361‑M2/1‑42 (MQ=255)
                                                                                                             aGGAATGTAAGGCATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacgtattggtagtgttttaggttcagataatgcccgatgactttgtcatgcagctccaccgattttgcgaacgagagcgacttccgtct                                  <  1:816732‑M2/143‑103 (MQ=255)
                                                                                                              atacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                                 >  1:852204‑M1/33‑143 (MQ=255)
                                                                                                              atacactaaatcagtaagttggcagcatcaccTTGTGCCACCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                                 <  2:839577‑M1/111‑1 (MQ=255)
                                                                                                                 cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                              <  1:558869‑M1/114‑1 (MQ=255)
                                                                                                                  tGTAATGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaattactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                             >  2:707567‑M2/1‑36 (MQ=255)
                                                                                                                          agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAGCTTCCTGATTCATGTCACATTTTAt                     <  1:238558‑M1/123‑1 (MQ=255)
                                                                                                                               aaaTTGTTCTTTATTTTGGGCCGgtgaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                >  2:657314‑M2/1‑23 (MQ=255)
                                                                                                                                ttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTAATGTCACATTTTATGGGgag               <  2:333668‑M1/129‑1 (MQ=255)
                                                                                                                                 tcagcagcaccccTTGTGCCGCCAATAAATATCTTTTCATATAATTAGCCAGAAAAGACGCGGCATATCGCCCTATCTACACCGATGATTCCGCAGCACGCGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga              >  2:790872‑M1/14‑143 (MQ=255)
                                                                                                                                  ggcagcatcaccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCCCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAt             <  2:946280‑M1/131‑1 (MQ=255)
                                                                                                                                      tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga         >  2:497972‑M2/1‑16 (MQ=255)
                                                                                                                                      tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga         >  1:94333‑M2/1‑16 (MQ=255)
                                                                                                                                      tCTTTATTTTGTGCCGggtaatgacgcaaacttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga         >  2:542574‑M2/1‑16 (MQ=255)
                                                                                                                                       catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCg        >  2:365133‑M1/8‑143 (MQ=255)
                                                                                                                                        tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccgccgtgcagggcgctcccccagatt       <  2:348292‑M2/143‑130 (MQ=255)
                                                                                                                                          tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca     >  2:342116‑M2/1‑12 (MQ=255)
                                                                                                                                          tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttaagaggccagcccatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca     >  1:1007556‑M2/1‑12 (MQ=255)
                                                                                                                                           accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAACCTTCCTGATTCATGTCCCATTTTATGGGCGGATTATCGTag   <  1:53772‑M1/140‑2 (MQ=255)
                                                                                                                                            ccTTGTGCCGCCAATAAATACCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAAGTTAAAACTTCCTAGTTCATATCACATTTTATAGGGGGATTCTCGTAGGc   <  2:795198‑M1/141‑1 (MQ=255)
                                                                                                                                             tttGTGCGGggtaatgtcttcgacttcttgatagtgttttatgttcatataatgcccgatgacttggtcatgcagctccaccgattttgagaccgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt  >  2:363728‑M2/1‑9 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.