New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2566839 =45 (0.800)4 (0.070) 4/270 8.0 9.1% coding (46/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase
?NC_000913 2566937 = 37 (0.690)coding (1171/1227 nt) eutH ethanolamine transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCCTGTTTATCGACAGGGGTAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCAATCGCCGTTACGCCGCCGATC  >  NC_000913/2566702‑2566974
                                                                                                                                         |                                                                                                                                       
gCCCTGTTTATCGACAGCGGTAAAGAACACCGGACTTTGCCAGCTAGTTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGc                                                                                                                                    <  2:425297/143‑1 (MQ=255)
 cccTGTTTATCGACAGGGGTAAAGAACACCGGACTTTGCCCGCAAGTTTTTCGTTTAATGAATTAGTAGCTCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGcc                                                                                                                                   <  1:961303/143‑1 (MQ=255)
      tttATCGACAGGTGTAAAGAACACCGGTCTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGatat                                                                                                                              <  2:562015/143‑1 (MQ=255)
      tttATCGACAGGGGTAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGatat                                                                                                                              <  1:927127/143‑1 (MQ=255)
       ttactgACAGGGGTCATGTACACTGGGCTTTGCCAGCTACTTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGTACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATc                                                                                                                             <  2:372430/138‑1 (MQ=255)
         aTCGACAGGGGTAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGa                                                                                                                           >  1:71907/1‑143 (MQ=255)
            gACAGGGGTAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATAc                                                                                                                        <  2:580694/143‑1 (MQ=255)
                    tAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGCGGTGGTGGTGCCGATATCGATACCGACGCTc                                                                                                                >  1:712835/1‑143 (MQ=255)
                      gaggcgacCGGACGTGGCCAGGTAATTGCGCGGTTAAGGGTTTCGTAGGGCGGCGCCTGCGACGCCGCCGCACGGTTGACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCaa                                                                                                              <  2:359252/137‑1 (MQ=255)
                         aaCACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAg                                                                                                           >  1:810172/1‑143 (MQ=255)
                            acCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTg                                                                                                        >  1:377741/1‑143 (MQ=255)
                              cGGACTTTGCCAGCTAATGTCGCGTTTAATGAAGTCGGAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCCGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGc                                                                                                      <  1:926405/143‑1 (MQ=255)
                                gccTTTGCCTGCTAATTTCGCGTTTAATGAATCCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGa                                                                                                    <  2:843216/141‑1 (MQ=255)
                                          gCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGATGCTCAATAGCTGGCGAGTGTTCACGa                                                                                          <  2:778851/143‑1 (MQ=255)
                                              aTTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATtgt                                                                                      <  1:381846/143‑1 (MQ=255)
                                              aTTTCGCGTTTAAGGAATTCGTAGCGCGTCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATtgt                                                                                      <  2:317866/143‑1 (MQ=255)
                                                ttCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGACACTCACCTGGGTGGCGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGCGTTCACGATTTTGc                                                                                    >  1:418398/1‑143 (MQ=255)
                                                     gTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGTTGCCGATATCGATACCGACGCTCAATAGCTTGCGAGTGTTCACGATTGTGCCTCCg                                                                               >  1:515914/1‑143 (MQ=255)
                                                     gTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGACTCCg                                                                               >  1:779236/1‑143 (MQ=255)
                                                        tAATGAAGTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCtt                                                                            <  1:368786/143‑1 (MQ=255)
                                                                tCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTa                                                                    <  2:71907/143‑1 (MQ=255)
                                                                 cGTAGCGCGGCACCTGCGACGCCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAg                                                                   <  1:59526/143‑1 (MQ=255)
                                                                      cgcgGAACCGGCGACACCGCCGCACGGTTCACCATCTCCAGCCGGGAGAAAATCACCTGGGTGGTTGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCTGCTTCGGTTTTAgtcgcg                                                              <  1:652525/143‑1 (MQ=255)
                                                                         tgccctcgCGACACCTCCGCACGGTTAACCTGCCCCACCCGTGAGAAAATCACCTCGGTGGTGGTGGTGCCGATATCGATACCTACGCTCCATATCTTGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAgtcgcggtc                                                           <  2:579217/136‑1 (MQ=255)
                                                                             catcgtgcacCGCCGCACGGTTGACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGt                                                       <  2:868680/136‑1 (MQ=255)
                                                                              cTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGGTCACGATTGTGACTCCGCTTAGGTTTTAGTCGCGGTCGCGtc                                                      >  2:586572/1‑143 (MQ=255)
                                                                                    cacCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGCTTTAGTCGCGGGCGCGTcttcttg                                                >  1:55287/1‑142 (MQ=255)
                                                                                     acCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTCGTGCCGCTATCCATACCGACGCTCAATAGCTGGCGAGAGTTCACGCTTGTGCCTCCGCCTCGGTCTTCGTCGCGGTCGCGTCTCCtttt                                               >  2:200829/1‑143 (MQ=255)
                                                                                      ccgccgCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGGCGCGCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTCCGGTTTTAGTCTCGGTCTCCGCCTCttttt                                              >  1:244989/1‑142 (MQ=255)
                                                                                       cgccgcACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTgg                                             >  1:594117/1‑143 (MQ=255)
                                                                                          cgcACGGTTATGCAGCTCCTGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCAc                                          <  2:437789/143‑1 (MQ=255)
                                                                                          cgcACGGTTAACCAGCGCCAGCCGGGAGAACGTCACCGGGGTGGGGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCAc                                          <  2:712835/143‑1 (MQ=255)
                                                                                            taCGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCa                                        <  2:165128/142‑1 (MQ=255)
                                                                                             aCGGTTCACCAGCTCCAGCCGGGAGAAAATCACCTGGGGGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAg                                       <  2:692431/143‑1 (MQ=255)
                                                                                                  tAACCAGGTCCTGCGGGGAGAAAATCGCCTGGGTGGTGGTGGTGCAAATTTTTATTTCGGGGGTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGcatca                                  <  1:465419/143‑1 (MQ=255)
                                                                                                      cAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATcgc                              >  1:347506/1‑143 (MQ=255)
                                                                                                            cAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTTAATAGCCGGCGCGTGTTCGCGCTTCTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCCGCCTCATcgccacgcc                        >  1:38778/1‑143 (MQ=255)
                                                                                                            cAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTCTTGGCACCAGCATCATcgccacgac                        >  1:420027/1‑141 (MQ=255)
                                                                                                              gCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCaa                      >  2:60335/1‑143 (MQ=255)
                                                                                                                    agaAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCAGCAGCATCATCGCCACGCCAATCGCCg                >  1:1004900/1‑143 (MQ=255)
                                                                                                                             gttGGGTGGTGTTGGTGCCGTTATCGTTACCTACTCTCACTAGCTGCCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCAATCGCCGTTAcgccgc       <  2:389201/141‑1 (MQ=255)
                                                                                                                              cTGGGTGGTGGTGGTGACGATATCGATACCGACGCTCAATAGCTGGCGAGAGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCAACATCGCCACGCCCACACCCGTGACgcggcc      >  2:374871/1‑143 (MQ=255)
                                                                                                                                 ggtggtggtggtGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCAATCGCCGTTACGCCGCCGAt   >  1:386079/1‑143 (MQ=255)
                                                                                                                                  gtggtggtggtgCCGATATCGATACCGCCGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCAATCGCCGTTACGCCGCCGATc  <  2:90163/143‑1 (MQ=255)
                                                                                                                                  gtggtggtggtgCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCACCACGCCACTCGCCGTTACGCCGCCGCTc  >  1:62660/1‑143 (MQ=255)
                                                                                                                                         |                                                                                                                                       
GCCCTGTTTATCGACAGGGGTAAAGAACACCGGACTTTGCCAGCTAATTTCGCGTTTAATGAATTCGTAGCGCGGCACCTGCGACACCGCCGCACGGTTAACCAGCTCCAGCCGGGAGAAAATCACCTGGGTGGTGGTGGTGCCGATATCGATACCGACGCTCAATAGCTGGCGAGTGTTCACGATTGTGCCTCCGCTTCGGTTTTAGTCGCGGTCGCGTCTTCTTTTGGCACCAGCATCATCGCCACGCCAATCGCCGTTACGCCGCCGATC  >  NC_000913/2566702‑2566974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.