New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =7 (0.120)56 (1.120) 38/252 0.3 87.4% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 10 (0.200)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC  >  NC_000913/1209477‑1209758
                                                                                                                                              |                                                                                                                                           
gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaac                                                                                                                                             >  2:459864‑M2/143‑143 (MQ=255)
gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaac                                                                                                                                             <  2:850793‑M2/1‑1 (MQ=255)
 cagatgctcgtgccgcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCg                                                                                                                                            <  1:898608‑M2/2‑1 (MQ=255)
  agatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgataccggtgcgtcctaatgtagccgttgctgccttgagttttgctccttctcccccaccaacat                                                                                                                                           >  1:508332‑M2/141‑141 (MQ=255)
  agatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGt                                                                                                                                           >  1:309491‑M2/141‑143 (MQ=255)
   ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGAGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTACTCCCAAACCAACgct                                                                                                                                          >  2:647032/1‑141 (MQ=255)
   gatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcatcaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGtt                                                                                                                                          >  1:963478‑M2/140‑143 (MQ=255)
      gcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagtttcgctccttctccccaaccaacgttgag                                                                                                                                       >  1:73246‑M2/137‑140 (MQ=255)
        ttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatcgctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttatcccaaaccaacgtttccta                                                                                                                                     >  1:150705‑M2/135‑139 (MQ=255)
          ttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaa                                                                                                                                   <  1:68301‑M2/11‑1 (MQ=255)
           tgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                  >  1:679087‑M2/132‑143 (MQ=255)
           tgccgcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                  <  2:378974‑M2/12‑1 (MQ=255)
               gcattccacccccactgaatgattactgattgctcaataccaccaatcatcaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcccccaaaccaaCCTTTATCAAACTgaa                                                                                                                              >  2:945859‑M2/128‑143 (MQ=255)
               gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCCGAGTGGCTGCAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                                              <  2:252717/143‑1 (MQ=255)
                        ccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACa                                                                                                                     >  1:526077‑M2/119‑143 (MQ=255)
                         cccactgaatgagtactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                    <  2:411171‑M2/26‑1 (MQ=255)
                          ccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccacaccgaCGTTTATGTAAATGAAgaaatacccag                                                                                                                   >  1:505464‑M2/117‑138 (MQ=255)
                            actgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTCATGAAAACGAAGAAATAACAAGCa                                                                                                                 >  2:569104‑M2/115‑143 (MQ=255)
                              tgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                                               >  1:170659‑M2/113‑143 (MQ=255)
                               cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                              >  1:221125/1‑143 (MQ=255)
                                  tgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                                                           >  2:862485‑M2/109‑143 (MQ=255)
                                    gcagAAAAAGCGGCACCATTGCATTTCAGCAAGCCTATTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACACAAACAGGGAATGCAGAGCATTCTACCAAGCCGACGTTCATGAAAATGAAGCAATAACAAGCAAGTggaag                                                                                                         >  2:407392/1‑140 (MQ=255)
                                          gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGACATCACTcc                                                                                                   >  2:842510‑M2/101‑143 (MQ=255)
                                          gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcccccaaaccaaCGTTTATGCAAACGAACAAACAACAAGCAAATAGCCTcattac                                                                                                   >  2:9439‑M2/101‑141 (MQ=255)
                                          aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTACGAAACTAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                   >  1:38378/1‑143 (MQ=255)
                                            ttgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                                                                 <  2:92250‑M2/45‑1 (MQ=255)
                                              gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                               <  2:699295‑M2/47‑1 (MQ=255)
                                                tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtacccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAAATGAAGAAATAACACGCAAATGGCCTCATTCCCGCttt                                                                                             >  2:141985‑M2/95‑143 (MQ=255)
                                                        accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAGTGAAGAAATAACACGCCAATGGCATCATTCCTGCTTTTACCAcgg                                                                                     >  2:488063‑M2/87‑143 (MQ=255)
                                                        accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttctgctccttctcccaaaccaaCGTTTATGAAAGTGAAGACATCACAAGCAAATGGCATCATTCGTCCTTTTAAcagag                                                                                     >  2:837285‑M2/87‑141 (MQ=255)
                                                          caatcataacctgtatggctatgaaaccggtgcgtccgagtgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                                                                                   <  2:976236‑M2/59‑1 (MQ=255)
                                                            ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATCACAAGCAACTGGCATCATTCCTGCTTTTACCAggcggcg                                                                                 >  1:398297/1‑141 (MQ=255)
                                                               ataaccgggatagccatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGTCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                              <  2:803454‑M2/64‑1 (MQ=255)
                                                                taaccgtcatagctctgaaaccggtccgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                                                             <  1:981524‑M2/65‑1 (MQ=255)
                                                                taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                                                             <  1:502881‑M2/65‑1 (MQ=255)
                                                                 gacccgtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGTTTGAAc                                                                            <  2:22803‑M2/66‑1 (MQ=255)
                                                                 caccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                            <  1:340906‑M2/66‑1 (MQ=255)
                                                                   agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                          <  1:981233/143‑1 (MQ=255)
                                                                    cggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                                         <  1:772388‑M2/69‑1 (MQ=255)
                                                                    cggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctaccggacctaCGTTTATGCAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                                         <  1:581490‑M2/69‑1 (MQ=255)
                                                                     ggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttatcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                        <  2:792708‑M2/70‑1 (MQ=255)
                                                                     ggcaaagctatgcaaccggtgcgtccgactgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                        <  1:75690‑M2/70‑1 (MQ=255)
                                                                            ggggtgtgtCTGCAGGTGACGGAACCGGGACATCGATAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                 <  2:553247/138‑1 (MQ=255)
                                                                            ctatgaaaccggtccgtcctaatgtagccgttgctgtattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                 <  2:587033‑M2/77‑1 (MQ=255)
                                                                             tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                >  1:773710‑M2/66‑143 (MQ=255)
                                                                             tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTCATtggg                                                                >  1:155426‑M2/66‑142 (MQ=255)
                                                                              ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACGTGCTGATTGGCt                                                               >  2:894565/1‑143 (MQ=255)
                                                                               tgaggccggtgcgtcctaatgtagccgtggctgcagtgagttgtgctccttctcccaaaccaaCGTTTATGAGAATGAAGAAAGAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                              <  1:563486‑M2/80‑1 (MQ=255)
                                                                               tgaaacctgtgcgtcctaacttagccgtgtctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                              <  1:83870‑M2/80‑1 (MQ=255)
                                                                               tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTACGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                              <  1:811653‑M2/80‑1 (MQ=255)
                                                                                 aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATg                                                            >  2:634270‑M2/62‑143 (MQ=255)
                                                                                 aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATg                                                            >  1:782500‑M2/62‑143 (MQ=255)
                                                                                  tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                                           <  2:852843/143‑1 (MQ=255)
                                                                                   accggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                          <  2:428051‑M2/84‑1 (MQ=255)
                                                                                         gcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa                                                    <  1:591042‑M2/90‑1 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATcaa                                                >  1:982833‑M2/50‑143 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                >  1:303048‑M2/50‑143 (MQ=255)
                                                                                                    tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGCGCAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                         <  2:878949‑M2/101‑1 (MQ=255)
                                                                                                     agcctgagctgcattgatttttgctccctctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGAACTTTCATTATGTTTATTGGCTATGTACGCGTATCAACAAATGAc                                        <  2:453580‑M2/102‑1 (MQ=255)
                                                                                                     agccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                        <  1:190407‑M2/102‑1 (MQ=255)
                                                                                                      gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAcc                                       <  2:309491‑M2/103‑1 (MQ=255)
                                                                                                          tggctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                   <  1:782930‑M2/107‑1 (MQ=255)
                                                                                                          gtgctgcagtgagtttagctccggcgcgcaagccagCGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                   <  2:397233‑M2/107‑1 (MQ=255)
                                                                                                               gcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                              >  2:845342‑M2/32‑143 (MQ=255)
                                                                                                                   tgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                          <  1:459864‑M2/116‑1 (MQ=255)
                                                                                                                     agtttcgctccttctcccaaaccagCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTAc                        <  2:73246‑M2/118‑1 (MQ=255)
                                                                                                                              ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAGAGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATg               >  1:772566‑M2/17‑143 (MQ=255)
                                                                                                                                ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg             <  1:634270‑M2/129‑1 (MQ=255)
                                                                                                                                ctcccccaaaccaaCTGTGATGAAAATGAAAAAATAACAAGCAAATGGCATTATTCCGCCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg             <  2:710806‑M2/129‑1 (MQ=255)
                                                                                                                                 tctcccacacctgCGTTTATGAATATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTCACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcgc            <  2:178112‑M2/130‑1 (MQ=255)
                                                                                                                                    cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAGACTATTACCAGAACACAGATCTACAACGAAATGCGGtgc         >  1:185429‑M2/11‑142 (MQ=255)
                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGGTTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCCgac        >  2:966908‑M2/10‑142 (MQ=255)
                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa        >  1:749636‑M2/10‑143 (MQ=255)
                                                                                                                                     ccaaaccaaCGTATATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGAATTAACATGCTAATTGGATATGTACGCGTATCAACAAATGACCAGAACACAGATCGACGAAGTAGTGAGCTGaa        >  2:539048‑M2/10‑143 (MQ=255)
                                                                                                                                           caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATATAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGCTCTACAACGTAATGCGCTGAactgtcc  >  2:646288‑M2/4‑141 (MQ=255)
                                                                                                                                              |                                                                                                                                           
GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC  >  NC_000913/1209477‑1209758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.