New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3529405	172 (1.340)	3 (0.020)	3/412	NT	1.9%	coding (58/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15
	?	NC_000913	= 3529461	146 (1.190)					coding (114/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15
Rejected: Frequency below/above cutoff threshold.

AAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3529161‑3529405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccgttGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACC  <  NC_000913/3529461‑3529224                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCT                                                                                                                                                                                                                                                       >  2:1004897/1‑238      TGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATTCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGT                                                                                                                                                                                                                                                 >  1:319611/1‑239      TGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGT                                                                                                                                                                                                                                                 >  2:675489/1‑239      TGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTACCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAACGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGT                                                                                                                                                                                                                                                 >  2:57552/1‑239       GAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTT                                                                                                                                                                                                                                                <  2:393282/239‑1                           TGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTT                                                                                                                                                                                                                                                >  1:286561/1‑219                           TGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTT                                                                                                                                                                                                                                                <  2:286561/219‑1                                                                                                                                                                      TCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGGTTTATAAAAAAGGGCAGCCCCTAGCCATTTATCCAGTCGAACCTCAACAGACGCGTTCTCTTTCATGGCGTTCCCTTCCCATTAGCGAGGGGAGCCGCGGGCGGTAaccat                                                                                 >  2:1336127/1‑234                                                                                                                                                                                 AAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGA                                                                      >  1:480118/1‑239                                                                                                                                                                                                                         ACTGGATAAATGGCTATGGGCTGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGAT                              >  2:373343/1‑239                                                                                                                                                                                                                                       TATGGGCTGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGACGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAG                 >  1:304684/1‑238                                                                                                                                                                                                                                            GCTGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTg           <  1:199298/239‑2                                                                                                                                                                                                                                              TGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAAC         <  2:1055496/239‑1                                                                                                                                                                                                                                              TGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAAC         <  2:1305241/239‑1                                                                                                                                                                                                                                              TGCCCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAAC         <  1:20071/239‑1                                                                                                                                                                                                                                              TGCCCGTTGTAATGCACCTTACCGCCTTCAAGCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAAC         <  2:1036821/239‑1                                                                                                                                                                                                                                                 CCGTTGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGA       <  2:480118/238‑1                                                                                                                                                                                                                                                     TGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACC  >  1:308806/1‑239                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3529161‑3529405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcccgttGTAATGCACCTTACCGCCTTCAATCATTTCACGGGCCAGCGCGCGGGTTTTATAAAAACGGGCAGCCCATAGCCATTTATCCAGTCGAACCTCAACAGCAGGTTTCTCTTTCATGGCGTCTCCTTCACATTAGCGAGGGGATCAGGCGGCGGTAGTCATTCAGTGACGGATGGCGTTGATACTGTTTCTCGGCAATCCCGGAATCAGGATTAGTCACGCCGAGGCAGTAACGAATACC  <  NC_000913/3529461‑3529224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.