Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 249,538 T→G 18.0% pseudogene (533/1713 nt) lfhA ← pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913249,5380TG18.0% 217.3 / 9.0 120pseudogene (533/1713 nt)lfhApseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis
Reads supporting (aligned to +/- strand):  ref base T (41/49);  new base G (16/11);  total (60/60)
Fisher's exact test for biased strand distribution p-value = 2.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 121 total aligned reads displayed.

CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGT  >  NC_000913/249300‑249772
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                            
  gggTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGTGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTg                                                                                                                                                                                                                                             <  2:882936/238‑1 (MQ=255)
   ggTGAGCGGGTTACCCTGTGCTTGGCCCACCAGCGCCACCAGTTGGTAACCGAGGCTTAAACGGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCGGCTGCTCGCGGGTTGCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGc                                                                                                                                                                                                                                            <  2:648611/238‑1 (MQ=255)
    gTGAGCGGGTTCCCCTGTCGTTTGCCCCCCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGAGAGGCTCGATCAGCGGAATGGTTTCCCAACTGCCCTGCTGCTTGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCg                                                                                                                                                                                                                                           <  2:1262884/238‑1 (MQ=255)
    gTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AACCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCg                                                                                                                                                                                                                                           <  1:366178/238‑1 (MQ=255)
       ggCGGGTTACCCTTTTTTTTGTCCACCAGCGCCACCAGTTTGAAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGGGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCa                                                                                                                                                                                                                                        <  2:1105267/237‑1 (MQ=255)
       aGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTCAAACCAAGCAGGGCGCTGACCAGCAACAACGGCAGGGGCGGGAt                                                                                                                                                                                                                                       >  1:648611/1‑239 (MQ=255)
       aGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCAt                                                                                                                                                                                                                                       >  1:565469/1‑239 (MQ=255)
          gggTTCCCCTGTGCTTTGTCCACCAGCGCCCCCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAGTGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑c                                                                                                                                                                                                                                    <  2:1144767/238‑1 (MQ=255)
             ttACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCgg                                                                                                                                                                                                                                >  1:510434/1‑239 (MQ=255)
              tACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGt                                                                                                                                                                                                                               >  1:283826/1‑239 (MQ=255)
               aCCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGt                                                                                                                                                                                                                               >  1:779612/1‑238 (MQ=255)
                     tgCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTaccacc                                                                                                                                                                                                                         >  1:1033118/1‑238 (MQ=255)
                      gCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCg                                                                                                                                                                                                                        >  1:1352686/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTACAACCAAGCAGGGCGCTGAACAGCAAAAACGGCCGGGGCGGCATT‑CCCGGTACCCCCAcccg                                                                                                                                                                                                                    >  2:255126/1‑236 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCGGGAGCGGCGTT‑TCCGGGCCCTCCCCCAg                                                                                                                                                                                                                    >  2:462262/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGGGGCATT‑CCCGGTACCACCGCCAg                                                                                                                                                                                                                    >  1:1068139/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGc                                                                                                                                                                                                                   <  1:222814/239‑1 (MQ=255)
                           gTCCCCCAGCGCCACGAGTTGTAAACGGAGGCTAAAGTGGATAGGCTGGATCGGCGAAATGTTTGCCCACTTGTCTTGCTGTTCGCGGGTTGCGGGGATGGTGCGGGTCCGG‑TTTT‑CGGGGCTTTTCTCTCCCGCCTCCGCCGCAAGCGGCTGTTTGCTCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCa                                                                                                                                                                                                                  <  2:752126/239‑1 (MQ=255)
                           gTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCACT‑CCCCGTACCACCGcccgg                                                                                                                                                                                                                   >  2:1302932/1‑235 (MQ=255)
                            tCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACGGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGc                                                                                                                                                                                                                                            <  2:521473/213‑1 (MQ=255)
                             cccccggggcCCCCAGTTTGTAACGGGGGCTTAAACTGGTGGGCTGCATCGGGGGATTGGTTCCCCACCTGCCCTGCTGCTCGCTGGTTTGGGTGATGGTGCGGTTCAGC‑GTTT‑CGGGGCTTTTCTCTTCCGCCTCCGCCGCCGGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCAc                                                                                                                                                                                                                 <  2:860382/230‑1 (MQ=255)
                             ccaccaGCGCACCCAGTTTGTACCGGAGGCTTAATGTGATAGGCTGGATCGGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTGGGTGATGGGGCGGGTCAGC‑GTTT‑CGAGGCTTTTCCCTCCCCCCCCCGCCGCCAGCGGCTTTTTGCTCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACg                                                                                                                                                                                                                <  2:708897/239‑1 (MQ=255)
                                    cgcCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCCGGACCACCGCCAGCACGAACAT‑aa                                                                                                                                                                                                        >  1:752126/1‑239 (MQ=255)
                                    cgcCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGGACCACCGCCAGCCCGAACAT‑aa                                                                                                                                                                                                        >  1:205387/1‑239 (MQ=255)
                                          caGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCAAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCgg                                                                                                                                                                                                  <  1:198366/239‑1 (MQ=255)
                                             tttGTAACGGAGTTTTAAACGGAGAGGCGCGATCGGGGGATTGGTTCCCCACCGGCCCTGCTGCTCGCTGTTGCGGGGGATGG‑GCGGGGTCGC‑GTTTCCGAGGCTTTCCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTgg                                                                                                                                                                                               <  2:1064340/239‑1 (MQ=255)
                                               tGTAACCGAGGATTAAACTGTTGGGCTCGATGAGCGGAATGGTTTCCAAACTGCCCTGCTGTTCGCTGGTTTCGGGGAGGGTGCGGGTCAGC‑GTTT‑CGAGCCTTTTCTCTCCCGCCGCCGCCGCCGGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCg                                                                                                                                                                                             <  2:954950/239‑1 (MQ=255)
                                                gTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCCCT‑CCCGGTACCACCGCCAACACGAACCTAAATCCCGG‑GGCgg                                                                                                                                                                                            >  2:763660/1‑239 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑cc                                                                                                                                                                                                                                   <  1:1314580/194‑1 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGGaggg                                                                                                                                                                                     >  1:983641/1‑237 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑cc                                                                                                                                                                                                                                   >  2:1314580/1‑194 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCAAT‑CCCGCTAACACCGACAGCACGAACAT‑AATTCCGGGGGCggggaagg                                                                                                                                                                                      >  2:777522/1‑232 (MQ=255)
                                                              aaCTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGCGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCCAT‑CCCCGTACCACCGGCAGCCCGAACCG‑AAACCCCGTGGCGgtgctgcacatctc                                                                                                                                                                               >  2:718848/1‑227 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCt                                                                                                                                                                         >  1:9699/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGGAGAGCACCGACGGGCt                                                                                                                                                                         >  1:1227838/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCCGTGGCGGGGGAGAGCACCGACGGGCt                                                                                                                                                                         >  1:785076/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGGCCCACCGCCAGCACGACCAT‑CATCCCGGGGGCGGGGGTGAGAACAGACAGGCt                                                                                                                                                                         >  2:1229262/1‑239 (MQ=255)
                                                                             tCAGCGGAATGGTTTCCCAACTGCCCTGCTGCTCGCTGGTTTCGGTGATGGGGCGGGTCAGC‑TTTT‑CGAGGCTTTTCTCTCCCGCCTCCGCCGCCAGGGGCTGTTTGCTCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCagcagc                                                                                                                                                               <  1:1302932/239‑1 (MQ=255)
                                                                             tCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCCCCAGCACGAAAAC‑AAAACCCGTGGCGGTGTGGAGCACCCCCGGGCCTGCccgcag                                                                                                                                                                >  2:857453/1‑238 (MQ=255)
                                                                             gcAGCGGAATGGTTCCCCAACTGCCCGGCTGCTGTCTGGTTGCGGTGATGGTGGGTGT‑AGCTTTTT‑CGAGGCTTTTCTCTCCCGCCCCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAACCCAAGCAGGGCTCGGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCcagcag                                                                                                                                                                <  2:1352858/237‑1 (MQ=255)
                                                                                  ggAATGGTTTCCCAACTGCCCTCCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCGGC‑GTTC‑CGAGGCTTTTCTCTCCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGt                                                                                                                                                           <  1:432543/238‑1 (MQ=255)
                                                                                     aggttttCCCAACGGACCTGCGCCCCGCTGGTTTCGGGGTGGGGGCGGGTAAGC‑TGTT‑CGAGGCTTTGCTCTCCCGCCTCCGCCGCGAGCGGGGGTTGCCTCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACg                                                                                                                                                       <  2:94857/235‑1 (MQ=255)
                                                                                           tCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTc                                                                                                                                                 <  1:280437/239‑1 (MQ=255)
                                                                                                aCTGCCCTGCTGTCCGTTGTTTTCGGGAGGGGTGGGGTTCGGC‑GTTC‑CGAGGCTTTTCTCTCCCGCCCCCCCCGCCAGGGTCTTTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGTCCCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATggg                                                                                                                                            <  2:1191767/239‑1 (MQ=255)
                                                                                                    gccTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTAAGC‑TTTT‑CGAGGCTTTTCTCTGCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGa                                                                                                                                         <  1:157441/237‑1 (MQ=255)
                                                                                                       tgctgcTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGCCGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATc                                                                                                                                     >  1:1191767/1‑239 (MQ=255)
                                                                                                         ctgctCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGCTATCg                                                                                                                                    >  1:318485/1‑238 (MQ=255)
                                                                                                                 tGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAGCAT‑AATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGCTATCGCCGTTGTc                                                                                                                            >  1:743703/1‑238 (MQ=255)
                                                                                                                   gTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCCCGTCATGGGCGATATCGCCGTTGTc                                                                                                                            >  1:1116721/1‑236 (MQ=255)
                                                                                                                   gTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGGGGGGGGGTAGAGCACCGACGGGCTTGCCCGCCGATGGTTCAGCACGGCAGTGGCGATATCGccctgttgcc                                                                                                                          >  2:605673/1‑230 (MQ=255)
                                                                                                                   gTTTCGGCGATGGTGCGGGTCAGC‑GCTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACAGCAGGTGCGGCATT‑CCCCGTACCACCGCCAGCACCGACAA‑AAAACCGGCAGAGGTGTAGAGCACCAGCGGGCCTGCCAGCAGCTGGTTATGCACGTCATCGGCGCTAACTCGGTTGTCGcc                                                                                                                         >  2:1036758/1‑238 (MQ=255)
                                                                                                                       cGGTGATGGGGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGAcg                                                                                                                     <  1:200227/239‑1 (MQ=255)
                                                                                                                       cGGTGAGGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGAcg                                                                                                                     <  1:496166/239‑1 (MQ=255)
                                                                                                                           gATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCCTT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGGGGCGGTGTAGAGCACCGACGGGCTAGCCAGCCGCTGGGTACGCACGTCATGGGGGAAATCCCCGGTGTCGCTGACGCggg                                                                                                                 >  2:36958/1‑239 (MQ=255)
                                                                                                                            agggTGCGGGTCAGC‑TTTT‑CGGGGCTTTTCCCTCCCGCCCCCGCCGCCGGCGGCTTTTTGCTCTCCCGCC‑CGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCggg                                                                                                                 <  2:1000023/236‑1 (MQ=255)
                                                                                                                              ggTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTg                                                                                                               >  1:844624/1‑238 (MQ=255)
                                                                                                                                  cGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCCGTGGCGGTGTAGAGCACCGACGGGCCTGCCAGCCGCTGGTTACGCACGTCATGGGGGATATCGCCCGTGTCCCGGACCGGGGGGACGa                                                                                                           >  2:242276/1‑238 (MQ=255)
                                                                                                                                    ggTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATCGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATaa                                                                                                        >  1:385639/1‑239 (MQ=255)
                                                                                                                                    ggTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCCCCGTTGTCGCTGACGCGGGTGACGATaa                                                                                                        >  1:694868/1‑239 (MQ=255)
                                                                                                                                         gC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCCAAGGGCTTGCCAGCCGCTGGTTACGCACGGCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAAt                                                                                                       >  1:1000023/1‑235 (MQ=255)
                                                                                                                                         gC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGAGCGGCATT‑CCCGGTACCACCCCCAGCACGTACAT‑AATCCCGGTGGCGGGGTAGCGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGCCATGGGCGCTATCGCCGTTGTCGCTGCCGCGGGGGACGATAACcgc                                                                                                    >  1:369558/1‑238 (MQ=255)
                                                                                                                                            gTTT‑GGAGGCTGTTCTCTCCCGCCTCGGCCACCGCGGGCTTTTGGCCCACCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGGGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgc                                                                                                    <  2:905544/236‑1 (MQ=255)
                                                                                                                                              tt‑CGAGGCTTTTCCCTCCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACAGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccgccg                                                                                               <  1:1243422/239‑1 (MQ=255)
                                                                                                                                               t‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATcgccgccgc                                                                                              >  1:775220/1‑239 (MQ=255)
                                                                                                                                                   aGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGGTATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCggg                                                                                           >  1:355746/1‑238 (MQ=255)
                                                                                                                                                         ttCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCCCCGCCCGCCCGAACCT‑AATCCCGGTGGCGGGGTAGAGGACCGACGGGCTTGCCACCAGCTGGTTACGCACGTCATAGGGGGTATCACCGGTGTCGCCGACGCGGGTGGCGATCATCGCCGCCGCCGTGgagcc                                                                                     >  2:183264/1‑237 (MQ=255)
                                                                                                                                                              ttCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  1:650087/239‑1 (MQ=255)
                                                                                                                                                              tgccaccccccccgccAGCGTCTTTTTGCTCACCCGCC‑GGCCGGTAAAACCAAGCAGGGCGCTAAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  2:592040/228‑1 (MQ=255)
                                                                                                                                                              tcccgcctcccccGCGGGCGGCTTTTTGC‑CGTCCCCCGAGCCGGTAAAACCAAGCCGGGCGCGGAACAGCAAAAACGCCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  2:1187520/237‑1 (MQ=255)
                                                                                                                                                              tcccgccgccgccgCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  1:849571/237‑1 (MQ=255)
                                                                                                                                                                ccgcctccgccGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCCTGGGCGATATCGCCGTTGTCGGCGACGCGGGTGACGATAATAGCCCCCGcggcgggggagagcagg                                                                              >  2:1202633/1‑228 (MQ=255)
                                                                                                                                                                ccgcctccgccGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTCCGCACGTCATGGGCGATATCGCCGTTGTCGCTGGCGCGGGTGGCGATAATCGCCACCGCGGGGgaggagcgcagg                                                                              >  2:294599/1‑230 (MQ=255)
                                                                                                                                                                 cgcctccgccGCGCGCGGCTGTTGGCTCAGCCCCC‑AGCCGGTAAAACCAAGCAGGGCGCGGAAAAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCaggg                                                                             <  2:1092697/239‑1 (MQ=255)
                                                                                                                                                                   cctccgccGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGGTAATCGCCGCCGCGGTGGAGAGCAGCagggaa                                                                           >  1:862037/1‑239 (MQ=255)
                                                                                                                                                                        gccgccAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATCGCCGCCGCGGTGGGGAGCAGCagggaaggga                                                                       >  1:1314905/1‑238 (MQ=255)
                                                                                                                                                                                  gCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCCTGCCAGCAGCTGGTTACGCACGGCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGCTAATCGCCGCCGCGGTGGGGAGCAGCAGGGGAGGGATCTGCGgcac                                                             >  2:44757/1‑238 (MQ=255)
                                                                                                                                                                                                 gCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATg                                             <  1:1198238/239‑1 (MQ=255)
                                                                                                                                                                                                       ccGGTAAACCCAACCAGGGCGTTGACCAGCAAAACCGGCGGGTGCGGCATT‑CCCGGTACCGCCGCCAGCACGAACAT‑AATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  2:283826/239‑1 (MQ=255)
                                                                                                                                                                                                       ccGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtca                                         <  1:1202633/238‑1 (MQ=255)
                                                                                                                                                                                                        cGGTAAACCCAAGCAGGGCGCTAAACGGCAAAACCGCAGGGTCGGGTATT‑CCCGATCCCCCCGCCAGCACCAACAT‑AATCCCGGTGGCGGTGTAGGGCGCCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  2:1014825/238‑1 (MQ=255)
                                                                                                                                                                                                        cGGGAAAACCAACCAGGGCGCGGAACAGCAAAAACGGCGGGGGCGGCATT‑CCCGGTCCCCCCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGTTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  1:648308/238‑1 (MQ=255)
                                                                                                                                                                                                          ttAAAACCAACCAGGGCGCTGAACAGCAAAAACGTCAGGGCCGCCATT‑CCCGGTCCCGCCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATAGCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcatca                                      <  2:785076/237‑1 (MQ=255)
                                                                                                                                                                                                            aaaaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGc                                    >  1:334340/1‑238 (MQ=255)
                                                                                                                                                                                                            aaaaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGGTGGTCATCAGc                                    >  1:836441/1‑238 (MQ=255)
                                                                                                                                                                                                              acccAGGCAGGGCGCTGAACAGCAAAAGCGGCAGGTGCGGCATC‑CCCGGTCCCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  2:355746/237‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  1:1030490/239‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  1:1329100/239‑1 (MQ=255)
                                                                                                                                                                                                                ccAAGCAGGGCGCGAAACAGCAAAAAGGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                               <  2:601296/239‑1 (MQ=255)
                                                                                                                                                                                                                 cAAGCGGGGCGCTGAACAGCAAAAACGGCGGGGGCGGCATC‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATAc                              <  2:556720/239‑1 (MQ=255)
                                                                                                                                                                                                                 cAAGCAGGGCGCTGAACAGAAAAACCGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATAc                              <  2:326156/239‑1 (MQ=255)
                                                                                                                                                                                                                    gCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATT‑CCCGGTACCACCGCCAACACGAACAT‑AATCCCGGGGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGCCAAGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATAGCCGCCGCGGGGGAGAGCAGCAGGGAAGGGGGCTGCGCCACCAGGCCGGCGCCCATGGTCATCAGCCCAGActg                            >  2:251765/1‑238 (MQ=255)
                                                                                                                                                                                                                       gggCGCTGAACAGAAAAAACGGCAGGTGC‑GCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTgg                        <  1:488102/238‑1 (MQ=255)
                                                                                                                                                                                                                         gcgcTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCCCCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGGTAATCGCCGCCGCGGTGGGGAGCAGCAGGGAAGGGATCTGCGCCACCCGGGCGCCCCCGAGGGTCATCAGGACATACCGCTGGaa                      >  2:870938/1‑239 (MQ=255)
                                                                                                                                                                                                                             taaacggaaaaacCGGGAGGGGCGGCATT‑CCCGGTCCCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGgc                   <  2:1068139/230‑1 (MQ=255)
                                                                                                                                                                                                                                    cAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCCCGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGAGCCGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGGTGGTCCTCCGCACATACTGCTGGAAGGGAGCATCg            >  2:1179133/1‑238 (MQ=255)
                                                                                                                                                                                                                                    aaaaacCGGCGGGGGC‑GCATTCCCCGGTCCCCCCGCCAGCACGAACAA‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATc             <  2:389776/236‑1 (MQ=255)
                                                                                                                                                                                                                                     aaaaaCGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCAt              <  1:161502/235‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaaCGGCAGGTGCGGCATG‑CCCGGTCCCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGgcg         <  1:462262/239‑1 (MQ=255)
                                                                                                                                                                                                                                        aaCGGAGGGGGCGGCGTC‑CCCGGTCCCCCCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCt       <  2:405190/239‑1 (MQ=255)
                                                                                                                                                                                                                                              aGGTGCGGCTTT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGt  <  2:1002450/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                            
CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGC‑GTTT‑CGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCC‑AGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATT‑CCCGGTACCACCGCCAGCACGAACAT‑AATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGT  >  NC_000913/249300‑249772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑