| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,745,397 | A→C | 22.2% | L198F (TTA→TTC) | yiaN → | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,745,397 | 0 | A | C | 22.2% | 192.4 / 12.4 | 126 | L198F (TTA→TTC) | yiaN | 2,3‑diketo‑L‑gulonate TRAP transporter large permease protein |
| Reads supporting (aligned to +/- strand): ref base A (40/48); new base C (2/29); total (48/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.24e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
CGCTCTACTGGTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTC > NC_000913/3745160‑3745630 | ggcggttgatgCGCGGGG‑CCACATATCCGGGCACCCGGGCGGCGGGGTTGATGCACTCTGGCGGCATTATCGCGCCAATTTTTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGAGTATCCAGCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCAGGATGATGGGCGCAACGCTG‑ATGCTTCCCGGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCa < 2:11314/232‑1 (MQ=255) gCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGGAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTTCCCCGCCAGCaaa > 1:257757/1‑239 (MQ=255) ccGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGGATTGCCCCCGGCATGATGATGGGGGCAACGCTG‑ATGGTTTCCTGGTGGTGGC‑CGGGCAGTCG‑CC‑TTAATTTTCACCCCCACCacaa > 2:1604445/1‑239 (MQ=255) ccGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCATGATGATGGGGGCAAACCCG‑ATGCTTACCTGGTGGGGGC‑AGGCCCGGCGCCC‑TTAATTT‑CCCCCCCAGCcaaa > 2:217733/1‑239 (MQ=255) gatgatGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGGCCCCGGCATGGTGATGGGCGCCAAGGTG‑ATGTTTACCTCGTGGGGGC‑AGGCCAGTTG‑CC‑CTACTTTTTCCCGCCAGCaaaac > 2:1654350/1‑237 (MQ=255) gatgatGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGCTGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCCGTCG‑CC‑TTAATTTACCCCCCCacccacaa > 2:1435583/1‑231 (MQ=255) tgatgCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTTCCCCCGGCATGTTGGTGGGCGCCACCCTT‑ATGCTTACCCGGTGGTGGC‑CGGCCCGTCG‑CC‑CTCATTTCACCCACCCGCcaaaaacc > 2:1592443/1‑236 (MQ=255) cgcgGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTGCGGCGTTTCCAGCGGATTACCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGa < 1:637860/238‑1 (MQ=255) ccAGCGCCCAACTATCCGGCCAACCGGGCGGGGGGGCTGTTTGCCTTTGGCGTCATTATCGCGCCAATTATTCCCCCTTCCATTCCTTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTATGGCGGGCATTGCCCCGGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCGGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGa < 2:16363/237‑1 (MQ=255) cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCGTTGCCCCTCGCATGATGGTAGGCGGCACCCTGTTTGTTTACCT‑GTGGGGGG‑AGGCCCGTCGCCC‑TGATTTTCCCCCCCCACCAAAAAACacgctcgcgg > 2:312891/1‑230 (MQ=255) cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGGATGATGATGGGCGCAAACCTG‑ATGCTTACATGGGGGGGGC‑AGGCCCGTTG‑CC‑TTAATTTAACCCGCCCGCAAAAAGCAACGATG‑CCgg > 1:587340/1‑239 (MQ=255) cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAgg > 1:1671820/1‑239 (MQ=255) cg‑cCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTAACTGGTGGTGGG‑AGGCCAGACG‑CC‑TTAATTTAACCCGCCAGCAAAAAGCAAAGATG‑CAgg > 1:991051/1‑239 (MQ=255) aCTATCCGGTCACCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATc < 1:441786/239‑1 (MQ=255) tATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACg < 1:1285311/225‑1 (MQ=255) ccGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGc > 1:1611207/1‑238 (MQ=255) aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGGATTTCCCCCCGGCTGGTGGTGGGGGCCACGCTG‑ATGCTTACCTGGGGGGGGCGAGGCC‑GGCG‑GC‑TTAATTTATCCCCCCCCCCAAAAGCAACGATGCCGGGAAACTTGCCACTCttt > 2:709872/1‑239 (MQ=255) aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGGATGATGATGGGCGCCACGCTG‑ATGCTTACCTGGGGGGGGC‑AGGCCAGGCG‑CC‑TTTATTTACCCCGCCAGCAAAAAGCAACGATG‑CCGGGAAACTGGCCCCCtttt > 1:927937/1‑239 (MQ=255) aCCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGGTGATGGGGGCAACGCCG‑ATGCTTTCCTGGGGGGGGC‑AGGCCAGTCT‑CCTTTAATTTACCCC‑CCACCACAAAAACACGATG‑CCGGGCATCTTGctcttata > 2:1285311/1‑234 (MQ=255) gggCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGGGGG‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCCGCAAAAAGCAACGATG‑CAGGGAATCTGGCACTCttttttt > 1:755804/1‑236 (MQ=255) ggcggcGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGAATCATGGTAGGGGCAGCGGCG‑ATACTTACCCGGGGGAGCG‑AGCCCAACCG‑CC‑CTTATTTTCACCCGCATACAAAAGCAAAGATG‑CCGGAAAACTGGGACGTTTTTTtc > 2:318669/1‑238 (MQ=255) ggcggcGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGGTGGGCGGAACGCTG‑TTGCTTTCCTGGTGGGGGC‑GGGGCCGTCG‑CC‑TTTAATTACCCCCCACGGAAAAAGCAACGATG‑CAGGGAAACTGGGACTCttttttt > 2:1455948/1‑235 (MQ=255) cggcggGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTTGTGGTGGC‑CGGCCAGTCG‑CC‑TTAATTTACCCCGCCACCAAAAAACAACGATG‑CAGGAAAACTGGCACTCTTTTGTCTcc > 1:359532/1‑239 (MQ=255) ttGATTGCCTCTGGCGGCATTATCGCGCCAATAATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGAAACGCTG‑ATGCTTACCGGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCt < 1:946157/237‑1 (MQ=255) ttGCCTCTGGCGGCATTATCGCTCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 1:1031288/239‑1 (MQ=255) ttGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 1:279367/239‑1 (MQ=255) ttGCCTCGGGCGGCGTTTTCGCGCCAATTATTCCCCTCTCCGTTCCGTTGATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGGAAGTTGTTTTTGGCGGGCTTTGCCCCGGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTTCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 2:1231326/239‑1 (MQ=255) gCCTCTGGGGTCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATAAGTAAGCTGTTTATGGCGGGCATGGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CATGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCt < 1:599500/239‑1 (MQ=255) gCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCt < 1:1604445/239‑1 (MQ=255) gCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCt < 1:1429405/239‑1 (MQ=255) ctttGGCGGCATTACCGCGCCAATTTTTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGt < 2:1590318/236‑1 (MQ=255) ctctGGCGGCTTTATCGCCCCAATTATCCCCCCTTCCTTTCCTTTTTTTATCTCCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTAGGGCGGGCATTGCCCCGGGCATGATGAGGGGCGCAACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGt < 2:1163217/239‑1 (MQ=255) ctctGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCTGGCATGCTGATGGGCGCAAAGCTG‑CTGCTTACTTGGGGGGGGC‑AGGCCCGTCG‑CC‑TTAATTTACCCCGCCCCGAAAAAGAAACGAGG‑CCGGAAATCGGGCGCTCTTTTGTTCCCGGTATATGGGGGCTGt > 2:712084/1‑239 (MQ=255) ggcggcATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTttct < 1:1683408/239‑1 (MQ=255) gcggcATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTTGTGGTGGC‑AGGCCAGTCG‑CC‑TTAA‑TTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGGACTCTTTTGTGTCCGGGATCTGGGCGCTGTttctt > 1:947735/1‑238 (MQ=255) ggcATTATCGCGCCAATTATTCCCCCTTCCATTCTGTTTATTATCGTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTAGGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGCCG‑CT‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTttcttc < 2:869226/238‑1 (MQ=255) ggaaTTATCGCGCAAATAATCCCCCCTTCCATTCCGTTTATTATCTCCGGCTTTTCCAGCGGATTACCCATCGGTAACTTGTTTAGGGGGGGCATTGCCCCGGGCATGATGATGGGCGCACCGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTttcttc < 2:257757/235‑1 (MQ=255) cATTATCGCGCAAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCa < 1:1506193/238‑1 (MQ=255) aTTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCTGCATGATGATGGGCGCAACGCTG‑TTGGTTACCTGGTGGTGGC‑AGGCCCGTCG‑CC‑TTAATTTTACCCGCCCCCAAAAAGCCACGATG‑CCGGCAATCTTGCACTCTTTTTTCTCCGCTATCTGTGAGCTTGTTCTTcccg > 2:409384/1‑236 (MQ=255) aTTATCGCCCCATTTATTCCCCCTTCCATCCCTGTTATTATCGTCGGCGTTCCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGCCGCAAGGCGG‑ATGCTTACCTGGGGGTGGC‑GGCCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGt < 2:927937/239‑1 (MQ=255) cAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTTTTTATGGCGGGCATTGCCCCTGGCATAATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 1:720412/215‑1 (MQ=255) aaTTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgcg < 1:563737/214‑1 (MQ=255) ttattCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGc < 1:1099409/239‑1 (MQ=255) cccccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGtt > 1:1105037/1‑239 (MQ=255) ccTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCGGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGgc < 1:1514548/203‑1 (MQ=255) tCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGCATGATGATGGGCGCAACGCTT‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑CTAATTTACCCCGCCAGCAAAAAGGAACGATG‑CAGGAAATCTGGCCCTCTTTTGTCTCCGGTCTCCTGGCGCTGTTTCTTCCAGTCATCCTTATTGGCGGGctttgtc > 2:1483657/1‑234 (MQ=255) tCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGGTGATGGGGGCAAAGCTG‑ATGCTTAACAGGTGGTGGG‑AGGCCAGTCG‑CC‑TTTATTTAACCCGCCCGCAAAAGGCCACGGTG‑CAGAAAAACAGGCACTCTTTTGTCTCCGGAGTCTGGGGGCTGGTTCTTTCAGTCCTCATTATTGGCGGGCTTctat > 2:174716/1‑235 (MQ=255) tCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCCGGCATGATGATGGGCGCAACGCTT‑ATGCTTACCTGGGGGGGGC‑AGGGCAGTCG‑CC‑TTAATTTACCCCCCCAGCAAACAACAACGATA‑GAGGGAAACAGGCACTCTTTTGTTTCCGCGATCGCGGCGCTCGTTTTTTCTGACATCATTATTGGTGGGtgttgtt > 2:418476/1‑232 (MQ=255) aTTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCCGCCAAAAGCAACGAGG‑CGGGAAATCTGGCACTCTTTTGTCTCCCGTATCTTGGCGCGTTTTCTTCCAGTCATCATTCTTGGCgggggtttctccc > 2:1242858/1‑228 (MQ=255) ttCTGTTTTTTATCTTCGGCGTTTCCAGCGTATTTTCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CT‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 2:1671820/239‑1 (MQ=255) ttCCTTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 1:1280062/239‑1 (MQ=255) ttCCGTTTATTATCTGCGGCGTTCCCAGCGATTTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑GGGCCAGTCT‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 1:388806/239‑1 (MQ=255) ttCCGTTTATTAGCTGCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 1:609655/239‑1 (MQ=255) tgccGTTGATTATCTTCGGCGTTCCCAGCGGATTATCCATCAGTAGGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 2:513561/237‑1 (MQ=255) tgccGTGTATTATCTGCGGCTTTGCCGGCGGATTACCCATCAGGAGGTTGTTTAGGGGGGGCATTGCCCCTGGCATGATGATGGGCGCACCGCTG‑ATGCTTCCCTGGTGGGGGC‑GGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCG‑CCGGc < 2:1173110/237‑1 (MQ=255) tcccGTTTATTATCTTCGGCGTTTCCGGCGGATTATCCATCAGTAGGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGTCGCAACGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGc < 1:1681760/237‑1 (MQ=255) cGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCTTGATGATGGGCGCAACGCTG‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTg < 1:1452978/239‑1 (MQ=255) ttattaTCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGtt < 1:312891/238‑1 (MQ=255) tattatCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTTCCCCCGGCATGATGATGGGCGCCACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGGCCGTCG‑CC‑TTCATTTAACCCCCCCACACAAAACAACCAAG‑GAGGAAAACTCGCACTCCTTTTTTTCCCGTATCAGGGCGCCGCTTCTTCCCGTCATCATTTTTTGCGGGGTTTTCT‑CCGCTCTGtttt > 2:1042874/1‑238 (MQ=255) tatCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTAccc < 1:251703/239‑1 (MQ=255) tggccGTTTCCAGCGGATCATCCCGCACGACCCTGTTTACGGCGGGCATTGCCCATGGTATGATGGTGGGAGCACCCCTG‑TCGCTTCCCTGGTGCTGGC‑AGGCATGTCG‑CC‑TTAATTGACCCCGCAAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTAcc < 2:1239046/235‑1 (MQ=255) cGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCg < 1:1592443/239‑1 (MQ=255) ttCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCCTTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGGCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGAGG‑CAGGAAATCTGGCACTCTTTTTTCTCCGGTATCTTGGCGCTGTTTTTTCCAGTCCTCATTATTTGTGGCGTTTGCTGCGGGCCTTCTTTCCCCCACCGAAccc > 2:973862/1‑239 (MQ=255) aTTACCCATCAGTAGGCTGTTTAGGGCGGGCGTTCCCCTTGGAATGAGGAGGGGCCCACCGCGG‑ATGCTTACCTGGTGGTGGA‑CGGCCAGTCG‑CC‑TT‑ATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTtg < 2:947735/238‑1 (MQ=255) aTCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCttt < 1:534163/239‑1 (MQ=255) tttATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCg < 1:1086224/217‑1 (MQ=255) ttATGGCGGGCATTGCCCCTGCCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGtt < 1:1483657/238‑1 (MQ=255) agggCGGGCTTTCCCCCTGGCATGATGAGGGGCGCAACCCTG‑ATGTTTACCGGGTGGTGGC‑AGGCCAGTCG‑CT‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGt < 2:275721/237‑1 (MQ=255) ggggCGTTGCCCCTGGCATGATGATGGGCGAAGCGCTG‑AGGCTTACCGGGTGGTGGC‑AGGCCAGCCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 2:373881/237‑1 (MQ=255) cgcgcttggCCCCTGGCAGGATGATGGGCGCAACGCTG‑AGGTTTACCTGGTGGTGGC‑GGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 2:755804/230‑1 (MQ=255) cGGGCATTGCCCCTGGCATGATGAGGGGCGCAACGCGG‑ATGCTTACCTGGGGGTGGC‑AGGCCAGTCG‑CC‑TAAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGc < 1:37002/238‑1 (MQ=255) gggCCTTGCCCGTGGCATGATGATGGGCGCTACGCTG‑ATGCTTGCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCca < 2:135551/239‑1 (MQ=255) gggCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:409384/239‑1 (MQ=255) ggCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCca < 1:506409/238‑1 (MQ=255) ggCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTTGCT‑CCGGCCTGTTTTCCCCCTCCGAAGCCCGGGCCGCTGCTGCTTTCTTTGCGCCGTTTTTGGCCGCAATTA‑TTTAACg > 2:351425/1‑239 (MQ=255) gCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTTGCT‑CCGGCCTGTTTTCCCCTACCGAAGCCGGGGCCGTTGCTGCTTTTCTTTCGCTGTTTGTTGCCACATTTT‑TTTACCGt > 1:857362/1‑239 (MQ=255) atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTTGCT‑CCGGCCCGTTTACCCCCACCGAAACCGGGGCCGGTGCTGCTTTTTTTTCGCTGTTTGTGGCCCCCGCTA‑TTTACCCTGaaaa > 2:1181551/1‑238 (MQ=255) atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCgg > 2:1673113/1‑161 (MQ=255) atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCgg < 1:1673113/161‑1 (MQ=255) atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGaaa < 2:1105037/238‑1 (MQ=255) atgatgGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTTCGCT‑CCGGCCTTTTTTCCCCCACCGAAGCCGGGGCCGTTTCTGCTTTCTTTTCGCTGTTTGTTGCCACCGGTA‑TTTTTCGTGAAAt > 1:790832/1‑239 (MQ=255) tgGGCCCACCGCTT‑ATTCTTCCCGTGTTGTGGC‑AGGCCAGTCG‑CT‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGAc < 2:760892/238‑1 (MQ=255) ggggCCCAACGTTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGCCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGAc < 2:45040/237‑1 (MQ=255) gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGc > 1:822963/1‑142 (MQ=255) gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTA‑CCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGTGCTGTTTGTCGCca > 1:45093/1‑214 (MQ=255) gggCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTTTGCT‑CCTGCCCTTTTTTCCCTCCCCACACCGGGGGCGCTTGTGCTTTCTTTGTGGTGTTTTTCTCCCCCGTTA‑TTTATCGTTGAATGAcca > 2:561611/1‑238 (MQ=255) cgcAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTTATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGtt > 2:1582897/1‑144 (MQ=255) cgcAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGtt < 1:1582897/144‑1 (MQ=255) cAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGCTTTCCC‑CCCGCCTGTTTACCCCCTCCCAACTCGGGGCCGGTGCTCCCTTTTCTTCGCTTTTTTTTGCCCCAGATT‑TTTACCGTGAGAAGTCCTTcta > 2:847839/1‑236 (MQ=255) aaCGCTG‑ATGCTTACCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCca < 2:506240/239‑1 (MQ=255) gCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTTGCT‑CCGGGCCGTTTTCCCCCACCCAAGCCGGGGCCGTTGCTGCTTTCTTTGCGCTGTTTTTCGCCCCAGTGT‑TTTATCGTGGAATGACCCTTGCccca > 2:89610/1‑238 (MQ=255) g‑ATGCTTCCCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACttt < 1:82791/239‑1 (MQ=255) cagccTTACCGGGTGGGGGC‑GGGCCAGTCG‑CC‑TTAATTTCCCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACt < 2:539023/233‑1 (MQ=255) tggCTTACCGGGTGGTGGC‑GCGCCAGTCG‑CC‑TTAATTCACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACttt < 2:857362/236‑1 (MQ=255) gCTTCCCTGGTGGGGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGc < 1:1242858/239‑1 (MQ=255) ggtggC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTTGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTTGCATGTa > 1:539023/1‑233 (MQ=255) gCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCgcgg < 1:847839/238‑1 (MQ=255) gCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGGTTCGCT‑CCGGCCTGTTTTCCCCTCCCCCAACCGGGGCGCTTTCTGCTTTCTATTCGCCGTTTTTCCCCCCAGTTATTTTCCCGGGAATCTCCCTTGCCCACCCTTT‑GCCTGTACTCAttttcccggg > 2:1272102/1‑231 (MQ=255) tAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCt < 1:752658/239‑1 (MQ=255) aaTTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTc < 1:455898/239‑1 (MQ=255) | CGCTCTACTGGTGCCGATGATGCGCAGCG‑CCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTG‑ATGCTTACCTGGTGGTGGC‑AGGCCAGTCG‑CC‑TTAATTTACCCCGCCAGCAAAAAGCAACGATG‑CAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCT‑CCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTA‑TTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTC > NC_000913/3745160‑3745630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |