| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 628,868 | T→G | 25.4% | G106G (GGT→GGG) | entA → | 2,3‑dihydro‑2,3‑dihydroxybenzoate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 628,868 | 0 | T | G | 25.4% | 110.0 / 2.9 | 53 | G106G (GGT→GGG) | entA | 2,3‑dihydro‑2,3‑dihydroxybenzoate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (9/27); new base G (14/2); total (23/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAACGCACGCTG > NC_000913/628642‑629105 | aaGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATTGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGTGGGTAACGTCGGCGGGGCGGTTTAccct > 1:8431/1‑237 (MQ=255) aCAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGGCCGATCAGCTCAGTAAAGAGGGCTGGCAGCAGACTTTTGCGGGTAACGTCGGCGGGGCGGTTTAACTGT‑Tcc > 2:1151462/1‑238 (MQ=255) ttGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGTGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAAcc > 1:33815/1‑239 (MQ=255) aaGCGTTCCCTCAGGAGCAATATCCCTTTGCGACCCGAGTGGTGGGTGTTGCCGACGCTGAGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGGAACGGAGGGACTGGGCGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAAc < 2:841032/239‑1 (MQ=255) aGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGGGCGACCGATCAGCTCAGTAAAGAGGGCTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGGGCGCGTAACCTGT‑TCCAG‑CAAACCATTAAc > 2:212128/1‑238 (MQ=255) aGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCCGCTCAGTAAAGAGGACTGGCAGCAGACTTTTTCGGGTAACGTCTGCGGGGCGTTTTACCTCT‑TCCCG‑CAAACAATGaaac > 2:803061/1‑237 (MQ=255) aGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGGGGGGTTAACCTGG‑TCCAG‑CAAAACATGGAcc > 2:538480/1‑239 (MQ=255) gCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTTCGGTTAACGTCGGCGGTGCGTTTAAACTGT‑TCCAG‑CCAAACATGAACCa > 1:989680/1‑239 (MQ=255) gCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCa > 1:556964/1‑239 (MQ=255) aGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTTCGGTTAACGTCGGCGGGGGGTTTAACCCGT‑TCCCG‑CAAAACATGAACCA‑GTTTTGCCg > 1:277169/1‑238 (MQ=255) tatCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCACTGGGGCGACCGATCAGCTTCGTAAAGAGGACTGGCAGCCGACTTTTGCGGTTACAGGCGGGGGGGGGGTTTAGCTGTATCCAG‑CAAACAACACAACA‑TTTTCG‑CGTCCgcgggg > 2:833563/1‑239 (MQ=255) tCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAgcggggcg < 1:1125617/239‑1 (MQ=255) tCCCTGTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAgcggggcg < 2:255465/239‑1 (MQ=255) ttGCGACCGAGGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAACCGGAGCGGCGGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGGGTGATCGATCCGCTCAGTAAAGAGGACTGGCAGCGGACCTTTGCGGTTAACGTCGCCCGGGCGGTTAACCCGT‑TCCCGCCAACCCTTGAACC‑‑GGTTCGCCGCCCCCCgggccgggcg > 2:546850/1‑239 (MQ=255) tGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGGGGGTTTAAACTGT‑TTCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGgggcggggcgg > 1:779810/1‑238 (MQ=255) aCCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGGATTTTACGCATGGGCGCGGCCCCTCAGCTCAGTCAAGAGGACCGGCCGCCGGCTTTTGCGGTTTACGTCGGCGGGGCGTTTTACCCTT‑TCCCG‑CCAACCACGAACCAGGTTTCCCCG‑CCGccgggcgggggcggtgt > 2:64806/1‑232 (MQ=255) ccGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGt < 1:607877/238‑1 (MQ=255) aaGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAGCGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGGAAAAAGGACTGGCAGCAGACTTTTGCGGTTAACGTCCGCGGGGGGGTTTACCCGT‑TCCAG‑CAAACCATGAACCA‑GTTTTGCCCTCCGcgggggggggggggtgtcgcc > 2:1110695/1‑228 (MQ=255) tGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGCATTTTACGCCTGGGCGCGACCGATCAGCCCAGTAAAGAGGACTGGCAGCCCACTTTTTCGGTTAACGTCCGCGGTGCGTTTTACCTCT‑TCCCC‑CCAACCCTGAACCC‑GTTTCGCCGTCAACGGGGCGGGGGGGCTGTCACTGTGGccttcgcc > 2:1027235/1‑231 (MQ=255) cgcgCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGt < 1:1125612/238‑1 (MQ=255) gcAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTAtt < 2:1189851/238‑1 (MQ=255) gcAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGGTAACGTCGGCGGGGCGTTTAACCTGT‑TCCAG‑CAAAACATGAACCA‑GGTTTGCCCTCAGCGGGGCGGGGGGGTTGTTCCTGTGGCGTCCGACCCCCCGCACCCGCcccggaatg > 1:39395/1‑234 (MQ=255) aaGTGTGTCAGCGACTGTTAGCTGAAACGGGGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCATCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGc < 1:546850/239‑1 (MQ=255) tgtgtCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGGTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGGTTGTTACTGTGGCGGCCGGCGCCGCGCACACCCCGCGGATTTGCAtt > 1:793689/1‑238 (MQ=255) gtgtCAGCGACTGTTAGCTGAAGCGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATg < 1:1110695/238‑1 (MQ=255) gtgtCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCAt < 1:1151462/237‑1 (MQ=255) gtgtCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATg < 1:746339/238‑1 (MQ=255) tgtCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCCGCAGACTTTTGCGGGTAACGTCCGCGGGGCGGTTTACCCTT‑TCCCG‑CAAACCATGACACA‑GTTTTGCCCGCCGCGGGGGGGGGCGGCTTTTCCTTTGGGGCCCCGCGCCCCCCACACGCCGCGTACTgggcgtgg > 2:743143/1‑233 (MQ=255) gtCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAg < 1:61539/238‑1 (MQ=255) cgcgCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGc < 1:1232121/238‑1 (MQ=255) tCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGtt < 2:556964/238‑1 (MQ=255) cggcggGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGt < 2:823758/238‑1 (MQ=255) cggGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCgg < 1:429152/238‑1 (MQ=255) ttttACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGaa < 1:128138/239‑1 (MQ=255) tACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTg < 2:33815/239‑1 (MQ=255) aTGGGCGCGACCGATCAGCTCAGTAAAGCGGACTGGCAGCAGACTTTTGCGGCTAACGTCTGCGGGGCGTTTAACCTGT‑TCCAG‑CAAACCATGGACCA‑GGTTCGCCGTCAGCGGGGCGGGGCGCTTGTCACTGTGGCGGCCGGAGCCGCGCACCCGCCGCCGATTGGGATGAGTGCTTATGGGGCCTGGGAAGGGGCGCCGACAAAGCTGGCTGTGCGCGGCGCGGCGGAACTgggcgg > 2:885983/1‑235 (MQ=255) aTGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCggg > 1:582694/1‑239 (MQ=255) gggCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCCCCCCCGCGCCCCAGCCCCGCATTGGCCTGAGTGCCTTTGGCGCCTCGCAACGCGCCCTCAAAAGCCTGGCGTTGCGCGTTGGGCCGGGACTGGCCGGtg > 2:499016/1‑238 (MQ=255) ccGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTg < 1:99320/239‑1 (MQ=255) ccGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTg < 1:1144763/239‑1 (MQ=255) ccGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTg < 1:212128/239‑1 (MQ=255) gATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTgcg < 1:784597/239‑1 (MQ=255) agGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGc > 1:501306/1‑198 (MQ=255) agGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGc < 2:501306/198‑1 (MQ=255) agGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGGTGCGGCGGGGGCCGTCAAGTGGgttt > 1:461220/1‑237 (MQ=255) agtcTTTTGCGGTTAGCGGCGGCGGTGCGTTTAGCCTGT‑GCCAG‑CAAACCATGACCCA‑GTTGCGCCGTCAGCGGGGCGGGGTGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTcc < 2:8431/233‑1 (MQ=255) cTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCcaccga < 1:538480/238‑1 (MQ=255) ttttGCGGTTAACGTCGGCGGGGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCcaccgaca < 2:779810/239‑1 (MQ=255) ttgtGCGGTTAACGGCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCcaccgaca < 2:39395/236‑1 (MQ=255) tgttGCGGTTAACGTCGGCGGGGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCcaccgaca < 1:885983/237‑1 (MQ=255) gTCGGCGGAGCGTATAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAacg < 1:245435/239‑1 (MQ=255) cggcggTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAacgca < 1:64806/239‑1 (MQ=255) cggTGCGTTTAACCTGT‑TCCAG‑AAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAacgcacg < 1:383808/238‑1 (MQ=255) tGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAACGCACGCtg < 1:651070/238‑1 (MQ=255) | AAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGT‑TCCAG‑CAAACCATGAACCA‑GTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAACGCACGCTG > NC_000913/628642‑629105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |