New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078058 (0.130)44 (0.810) 39/252 0.3 87.1% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 6 (0.110)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 118 total aligned reads displayed.

GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947
                                                                                                                                             |                                                                                                                                                
gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                                 <  1:773286/143‑1 (MQ=255)
      ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAgcaaca                                                                                                                                           <  1:942346‑M1/23‑3 (MQ=255)
         tGGAGGAGGGGCGGCACGACCAGGTAGTTACCGCACTTCGGGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                                                                        <  2:820108/143‑1 (MQ=255)
         tGGAGAAGCGGCGGCACGACCAGTTACGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                        <  1:792402‑M1/143‑11 (MQ=255)
           gatccgtgttctggtcatttgttcctacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                      >  1:717107‑M1/116‑143 (MQ=255)
            atcgttgttctggtcagttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaacgcaggaatgatgccgtttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                     >  2:985500‑M1/115‑143 (MQ=255)
             tcgctgttctggtcatttgttgatacgcgtacatagctaagcagcatgttaattctccctggtcaaagcaggaatgatgccatttgcttgtgatttcttcatgttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                    >  2:985728‑M1/114‑143 (MQ=255)
              aaGGGGCGGCACGACCAGTTACTGACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                                   <  2:1073486‑M1/143‑16 (MQ=255)
                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTGAAGCCGCAAGAATCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                                 <  1:600930‑M1/143‑18 (MQ=255)
                ggagcggcacgACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAGCGGCTCTCGAAAACCTTGGCTTGGGAGAAGGcgctgcattacctgttg                                                                                                                                 >  1:843833‑M1/4‑126 (MQ=255)
                 tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacaTTGGTATGGGGGAAGAAGCAAAAGTCAATgcagc                                                                                                                                <  2:127828‑M1/34‑1 (MQ=255)
                 tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctgataaaagaaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGACCGACTAAAACTCAATgaagc                                                                                                                                <  2:719534‑M1/34‑1 (MQ=255)
                 gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCCAAACTCAcagcaga                                                                                                                                >  2:981521/1‑142 (MQ=255)
                     ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGCGAAGGAGCAAAAGTCAATGCAGCAACg                                                                                                                            <  1:29546‑M1/38‑1 (MQ=255)
                       ggtcgtgtgttcatacgcgtacatatccaatacgcatgttaaatccccctggtataagcaggaatgatgccatttgcttgttatttcttcatttgcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                          >  2:115078‑M1/104‑143 (MQ=255)
                       ggtcatttgttgatacgcgtacatagccaataagcatgttaaacccccctggtaaaagcaggaatgatgccatctgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                          >  1:400196‑M1/104‑143 (MQ=255)
                        aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATGTCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                         >  1:700282‑M1/1‑118 (MQ=255)
                        aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGATTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGccctgcattacctgttggagtcccg                                                                                                                         >  2:917949‑M1/1‑118 (MQ=255)
                         tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttccttttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                                        <  1:1056102‑M1/42‑1 (MQ=255)
                            tttgttgatacgcgtccatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAGCTCAATGCAGCAACGGCTACAt                                                                                                                     <  2:939267‑M1/45‑1 (MQ=255)
                               gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcctaaacgTTGGTATGGGAGAAGGAGCAAGACTCAATGCAGCAACGGCTACAT‑‑TAg                                                                                                                <  2:468827‑M1/48‑1 (MQ=255)
                                ttgatacgcgtacatagccagtaagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAgg                                                                                                               >  2:685182‑M1/95‑143 (MQ=255)
                                taacttaccgCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                                 <  1:683273‑M1/141‑34 (MQ=255)
                                 tacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg                                                                                                                >  1:953027‑M1/1‑109 (MQ=255)
                                   cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAGACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                                              >  2:977734‑M1/1‑107 (MQ=255)
                                   atacgcgtacacagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACAT‑‑TAGGACg                                                                                                            <  2:1064190‑M1/52‑1 (MQ=255)
                                      acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                           >  1:750427‑M1/1‑104 (MQ=255)
                                       ccGTACTGCGCGCGCGGCTGTTAAGCCGCAAGAAGCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                          <  2:638082‑M1/143‑41 (MQ=255)
                                        cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCg                                                                                                       >  1:755532‑M1/87‑143 (MQ=255)
                                          tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGt                                                                                                     >  1:998771‑M1/85‑143 (MQ=255)
                                          tacatagacaataagcatattaactccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGt                                                                                                     >  1:399736‑M1/85‑143 (MQ=255)
                                           acagaggcaataagcatgttaaatcccccttgtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGtt                                                                                                    >  2:249936‑M1/84‑143 (MQ=255)
                                              tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttacttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCACTGCCGCAACGGCTACAT‑‑TAGGACGCACCGGTTtcc                                                                                                 <  2:383267‑M1/63‑2 (MQ=255)
                                               agccaataagcatgttaaatcctcctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTAGGTTTGGGAGAAGGAGCAACACTCCATGCAGCAACGGCAAAAT‑‑GGCGTCTCACCGGTTTCAt                                                                                                <  2:173609‑M1/64‑1 (MQ=255)
                                                gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccg                                                                                                 >  1:958996‑M1/1‑94 (MQ=255)
                                                  gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAAGCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                                                               >  1:582772‑M1/1‑92 (MQ=255)
                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttccgccgctccgccacca                                                                                           >  1:278803‑M1/1‑88 (MQ=255)
                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaaca                                                                                           >  2:616841‑M1/1‑88 (MQ=255)
                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCgg                                                                                     <  1:790695‑M1/75‑1 (MQ=255)
                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCgg                                                                                     >  1:791565‑M1/69‑143 (MQ=255)
                                                           tgttaaaccccccttgtaatagcaggaatgatgctattttcttgttatttcttcattttcattaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                    >  1:138152‑M1/68‑143 (MQ=255)
                                                            tAAGCCGCAAGAATCCGTTTGGCGATATCAAACCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                   <  1:912186/143‑1 (MQ=255)
                                                              ttattccccctgctaaaagcagcaaagatgccatttgcttgttacttcttcatcttcataaacgTTGGTGTGGGAGAAGGAGCAAAACTCAAGGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                 >  1:77254‑M1/65‑143 (MQ=255)
                                                               gcggCAAGAATCCGTTTGGCGATATCAAATCGGATGGGACGGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                                <  2:335415/140‑1 (MQ=255)
                                                                 cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtgccgtgggcgtcggccactccgcaaacaggctggctgag                                                                                >  1:390949‑M1/1‑77 (MQ=255)
                                                                 atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                              <  1:495732‑M1/82‑1 (MQ=255)
                                                                  gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcccacaggctggctgtca                                                                               >  1:919483‑M1/1‑76 (MQ=255)
                                                                   ccccctggtaacagcaggattgatgccatttgcttgttatttcttcattttcataagcgTTGGTTTGGGTGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                            >  2:596822‑M1/60‑143 (MQ=255)
                                                                   cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcacccactccgccaacaggctggctgagat                                                                              >  2:43239‑M1/1‑75 (MQ=255)
                                                                    cccctggtaaaagcgggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                           <  2:225311‑M1/85‑1 (MQ=255)
                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                          >  1:818770‑M1/58‑143 (MQ=255)
                                                                      gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca                                                                           <  1:631431‑M1/143‑72 (MQ=255)
                                                                      gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCATGGTTGGTGAGAAGGcaatgaattacctgttggtgtcccggttccgtgcccttcagccactccgccaacaggctgcctgagctgcc                                                                           >  2:1031315‑M1/1‑72 (MQ=255)
                                                                         tCCGTTTGTCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg                                                                        <  2:243034‑M1/143‑75 (MQ=255)
                                                                           taaaggcaggactgatgtcgtttggttgttatttcttcattttcatgaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGATGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                    >  2:718611‑M1/52‑143 (MQ=255)
                                                                           taaaagcgggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                    >  1:1053436‑M1/52‑143 (MQ=255)
                                                                            gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtc                                                                     >  1:618421‑M1/1‑66 (MQ=255)
                                                                             aaagcgggcatgctgccatttgcttgttatttcttcattttcatagacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                  >  1:1079308‑M1/50‑143 (MQ=255)
                                                                             aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                  >  1:931546‑M1/50‑143 (MQ=255)
                                                                             aaagcaggaatgatgccagttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                  >  2:211631‑M1/50‑143 (MQ=255)
                                                                              aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                 >  1:1082777‑M1/49‑143 (MQ=255)
                                                                                 gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccgctccgccaacaggctggctgaaatgcactggtgcgccc                                                                >  2:401541‑M1/1‑61 (MQ=255)
                                                                                 caggaatgattccattttcttgttatttcttcattttcataaacgTTGGACTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa                                                              >  1:367343‑M1/46‑143 (MQ=255)
                                                                                  aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                             <  2:638330‑M1/99‑1 (MQ=255)
                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCAAAGCTCAATGCAGCAACGGCTACAT‑‑TAGGACGCCCCGGTTTCATAGCTATATCGGTTATGATTTTTGGTATTTAGAAATCa                                                           <  1:360627‑M1/101‑1 (MQ=255)
                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                           >  2:647476‑M1/43‑143 (MQ=255)
                                                                                    gaatgatgccatctgcttgttatttcttcattttcatacccgACGACCACCTATAAGGAGCAAAACTCAGTGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                           >  1:758718‑M1/43‑143 (MQ=255)
                                                                                      atCCAATCGGATGTCACTTTGCAAACGGCTCTCGAAAACCGTGGGATGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                         <  1:17982/143‑1 (MQ=255)
                                                                                        gatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                       >  2:347671‑M1/39‑143 (MQ=255)
                                                                                        cAACTCGGATGGCACTGTGCAAACGGCTCTCGATAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgctaacaggctggctgaaatgcaatggtgccgctttttctg                                                         <  2:616731‑M1/143‑90 (MQ=255)
                                                                                        cAAATCGGATGGCGCTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg                                                         <  2:1010773‑M1/143‑90 (MQ=255)
                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgc                                                        <  2:984408‑M1/143‑91 (MQ=255)
                                                                                           gccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCAAAAAAAAAA‑‑AAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTCAGCAATCAGTACTCa                                                    <  1:813132‑M1/108‑1 (MQ=255)
                                                                                                aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCCATCAGTAATCATTcgg                                               >  2:38257/1‑141 (MQ=255)
                                                                                                aTGGCACGGTGCGAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                                 <  2:922790‑M1/143‑98 (MQ=255)
                                                                                                  ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgccgaagaata                                               >  2:530389‑M1/1‑44 (MQ=255)
                                                                                                   gCACTGTGCAAACGGCTCTCGAAAATCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                                              <  1:725678‑M1/143‑101 (MQ=255)
                                                                                                    ttcttattttttcgttctcataaacgTTGGCTTGGGAGAAGGAGCAGAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                           >  1:1007101‑M1/27‑143 (MQ=255)
                                                                                                         atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                      >  2:1056102‑M1/22‑143 (MQ=255)
                                                                                                           cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                                      >  1:643034‑M1/1‑35 (MQ=255)
                                                                                                            aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                     <  2:750427‑M1/143‑110 (MQ=255)
                                                                                                             cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATCCCGGTGATGATTGGTGGTATTGAGCACTCAGTCATCGTTCCGTGGGGGtggactc                                  <  2:753091‑M1/126‑4 (MQ=255)
                                                                                                             cttcattttcataaacgGTGGTTTGGGAGAAGGAGCATAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGGTTGGTGGTGTTGAGCAATCAATAATCATTCAGTGGGGGtggactg                                  <  1:138286‑M1/126‑4 (MQ=255)
                                                                                                              ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                 <  1:166129‑M1/127‑1 (MQ=255)
                                                                                                              aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATCAAAAACCACACGTTCTGGGGCGCACCGGTTTCATAGCGATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                 <  1:252621/143‑1 (MQ=255)
                                                                                                                cattttcttaaacgTTGTGTTGGGAGAAGGAGCAAAACCCGATGCAGCAACGGGTACAT‑‑TAGGACGCACCGGTTTCATAGCTAGACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                               >  1:35602‑M1/15‑143 (MQ=255)
                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcactgccatggtgccgctttttctgctgaagaatacccgggactggcaaagg                              >  1:40731‑M1/1‑27 (MQ=255)
                                                                                                                     tcGAAAACCTTGGTTTGGGAGAAGGctctgccttacatgttggtgtcccggttcaatggccttcagccactccgccaacagcccggctgacatgcaatggtgccgcttcttccaatgaagaatacccggaacaagcaacggct                            >  2:441404‑M1/1‑25 (MQ=255)
                                                                                                                       gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgcagaatacccggaactcgcaaaggctta                          >  1:1022510‑M1/1‑23 (MQ=255)
                                                                                                                        aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttctctgctgaagaatgcccggaactggcaaaggcgtac                         >  2:536661‑M1/1‑22 (MQ=255)
                                                                                                                          aacgGTGGTTGGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                     >  1:193753‑M1/5‑143 (MQ=255)
                                                                                                                            cggtggtTTGGGGGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcccctccgccaacaggctggcggaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                     <  2:906608‑M1/140‑126 (MQ=255)
                                                                                                                                GGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctc               >  1:719534‑M1/1‑143 (MQ=255)
                                                                                                                                    tGGGAGGAGGctctgcattaccgggtagtgtcccgggtccgtggccttcaggcactccgccaacaggctggctgacatgcaatggtgccgcgttttctgctgaagaatagccggaactggcaaaggcttatccgacaaataaa             <  2:913561‑M1/143‑134 (MQ=255)
                                                                                                                                        AGAATGAGCAAAACTCAATTCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg       >  1:978844‑M1/1‑143 (MQ=255)
                                                                                                                                        AGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg       >  1:991945‑M1/1‑143 (MQ=255)
                                                                                                                                          aaGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaatacattgcct       >  1:332505‑M1/1‑4 (MQ=255)
                                                                                                                                          AAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt     >  1:939267‑M1/1‑143 (MQ=255)
                                                                                                                                            GGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg   <  2:42029‑M1/143‑1 (MQ=255)
                                                                                                                                             GAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGa  >  1:578873‑M1/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                                
GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAT‑‑TAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.