New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4094357 =NA (NA)3 (0.050) 3/270 9.8 4.5% noncoding (42/402 nt) REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
?NC_000913 4094573 = 63 (1.040)noncoding (258/402 nt) REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCC  >  NC_000913/4094434‑4094714
                                                                                                                                           |                                                                                                                                             
cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACCACTGTTGCCGACCTGTAGGCCGGATAAGGCCCTTGTGCCGCATCCGGCAATCCATGCCTGATGCGACGCTGCCGCGTCTTATCCGGCCCAc                                                                                                                                            >  2:485492/1‑143 (MQ=11)
    cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTATCGCGTCCTCGCAGGCCTACCAcc                                                                                                                                        >  2:445389/1‑142 (MQ=11)
    cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCACCCGGCACTCCATGCCTGGGGCGAACCTGTCGCGTCTCCTCAGGCCTACacca                                                                                                                                        >  2:493833/1‑140 (MQ=11)
      gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTAt                                                                                                                                      <  1:972211/143‑1 (MQ=33)
      gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCATACAACTAt                                                                                                                                      >  1:1131766/1‑143 (MQ=21)
        aatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGCCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCCATGCCTGAGGCGACGCAGACCCGTCTTCTCAGGACTACAAcacttc                                                                                                                                    >  2:146644/1‑138 (MQ=11)
                ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCATTCAATGCCTGATGCGACGCTGTCGCGTCGTATCAGGCCGACAACTATTGCCGAcccg                                                                                                                            >  1:1055333/1‑141 (MQ=255)
                ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATAAGGCCTACACCTATTACCGACCTg                                                                                                                            >  1:494953/1‑143 (MQ=255)
                 cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCCTCCGGCAATCACTGCCTCATGCGACGCTGTCGCGTCGTACGAGGCCTACAACCATTGCCGCCCTGt                                                                                                                           >  2:327022/1‑143 (MQ=11)
                   gATGCGACGCTGTCGCGTCTTATCAGGCCTACAACCGTGGCGAGGCGGGAGGCCGGATAAGGCACTTCTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAg                                                                                                                         <  1:96194/143‑1 (MQ=11)
                      gCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCCGGCCTACAAATGTTGCCGACCTGTAGGcc                                                                                                                      >  1:83216/1‑143 (MQ=12)
                      gCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGcc                                                                                                                      <  1:40772/143‑1 (MQ=38)
                            cggTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATaa                                                                                                                <  1:255160/141‑1 (MQ=38)
                                   gccTTATCAGGCCTACTACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACtt                                                                                                         <  2:72664/141‑1 (MQ=37)
                                    tCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATCAGGCACtcg                                                                                                        >  1:1029323/1‑141 (MQ=255)
                                    tCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTtg                                                                                                        >  1:615103/1‑143 (MQ=38)
                                     cgtATCAGGCCTACAACTGTTGCCGACCTGTAGTCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTtgt                                                                                                       <  1:186923/141‑1 (MQ=37)
                                           aGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACa                                                                                                                                           >  2:434421/1‑101 (MQ=33)
                                           aGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCa                                                                                                 <  1:555098/143‑1 (MQ=38)
                                                tgcacctgctgCCGCCCGGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCGGTAGGCCAGATAAGGCACTTGTGCCGCATCCgg                                                                                            <  2:195763/138‑1 (MQ=11)
                                                  cAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTCTCAGGCCTACAACTATTGCCGACCTGTACGCCGGATAAGGCACTTGTGCCGCATCCGTca                                                                                          >  1:372450/1‑143 (MQ=255)
                                                      tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGGGTCTTATCAGGCCCACCAGTATTGCCGGCCTTGAGGGCGGATAAGGCACTTCTGCCGCATCCGGcagtca                                                                                      >  2:255475/1‑143 (MQ=11)
                                                      tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatga                                                                                      >  2:1132832/1‑141 (MQ=37)
                                                      tGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatca                                                                                      <  1:677176/143‑1 (MQ=38)
                                                       ggggCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGcaatcaa                                                                                     <  2:813659/140‑1 (MQ=21)
                                                         tGCCGACCCTTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCATGCTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATg                                                                                   <  2:690355/143‑1 (MQ=255)
                                                            cGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCAATGCCt                                                                                >  1:641942/1‑143 (MQ=21)
                                                             gACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAGTCAATGCCTg                                                                               >  1:954334/1‑143 (MQ=25)
                                                              aCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCGCTTGGGCCGGAGCCGGCAGGCAATGCCGGa                                                                              >  1:994449/1‑143 (MQ=11)
                                                                   tAGGGCGGAGAAGGCAGTTGGGCCGCATCCGGCAATCAATGCCTGATGCGGAGTTGTCTTTTCTTATCAGGCCTACAACTATGGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa                                                                         <  1:262717/143‑1 (MQ=11)
                                                                   cacgCCGTATAAGGCACTTGCGCCGCATCCGGCCATCACTGCCTGATGCGACGCCGTCACATCATATCTGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGa                                                                         <  2:404298/140‑1 (MQ=11)
                                                                             aaGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATGAATGCCTGATGCGACGCTGTcgcg                                                               >  1:623822/1‑143 (MQ=17)
                                                                                gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATc                                                                                               >  2:787766/1‑108 (MQ=33)
                                                                                gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATc                                                                                               <  1:787766/108‑1 (MQ=33)
                                                                                gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCt                                                            >  1:866920/1‑143 (MQ=32)
                                                                                  aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTa                                                          <  2:594713/143‑1 (MQ=32)
                                                                                   cTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGACCTCGCGCCACATCCGGCAATGCGTGCCTGCGGCGACGCCGAcgcgccctct                                                         >  2:508410/1‑137 (MQ=11)
                                                                                        gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCGGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                    <  2:882080/143‑1 (MQ=17)
                                                                                        gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                    <  2:850373/143‑1 (MQ=32)
                                                                                        gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGc                                                    <  2:235252/143‑1 (MQ=32)
                                                                                         ccGCATCCGGCAATCAATGCCTGTTGCGACGCTGTCGCGTCTTAGCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGcc                                                   <  2:628270/143‑1 (MQ=17)
                                                                                         ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCCATGCCTGCTGCGGCGCTGTCGCCTCTTATCAGGcc                                                   >  2:969708/1‑143 (MQ=255)
                                                                                         ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATg                                                                            <  1:648366/118‑1 (MQ=32)
                                                                                         ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCTCGGCTTATCAGGcc                                                   >  1:1049677/1‑143 (MQ=17)
                                                                                          cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCACTTAATGCCTGCTGCGCCGCTCTCGCCTCTTGTCAGGcgt                                                  >  1:202095/1‑141 (MQ=11)
                                                                                            cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAATGCAGGTGTGTTGCATCCGCCAATCAATGCCCGAGGCGACGCCGACGCGCCTTCTCATGCCtcc                                                >  2:815781/1‑141 (MQ=11)
                                                                                              tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATg                                                                                   <  1:84495/106‑1 (MQ=33)
                                                                                                   caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGtt                                         <  1:70625/143‑1 (MQ=32)
                                                                                                   caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGtt                                         <  1:615841/143‑1 (MQ=32)
                                                                                                    aatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGa                                                                              <  1:409361/105‑1 (MQ=33)
                                                                                                      tcagggCCTGAGGCGACGCTGTCGGGTCTGATCAGGCGTACAAGGATGGCCGGGCTGTAGGCCGGATAAGGCACTGGTGCCGCAGCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGcc                                      <  1:92469/138‑1 (MQ=11)
                                                                                                          tGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGAcc                                  >  2:657922/1‑143 (MQ=32)
                                                                                                              tggtGCGACGCTGTGGCGGCTTATCAGGCCTACAACTATTGCCGACCTGTCGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTa                              <  2:54080/140‑1 (MQ=255)
                                                                                                                   cGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCg                         >  1:321617/1‑143 (MQ=35)
                                                                                                                     aCGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCAGTTGTACCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACACCTGTGGCCGACCGGAAGGCCggg                       >  1:1149900/1‑142 (MQ=11)
                                                                                                                      cGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGAt                      >  2:200746/1‑143 (MQ=35)
                                                                                                                          gTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAgg                  <  1:1017788/143‑1 (MQ=35)
                                                                                                                           tCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCGCACACCTGTTGCCGACCCGTCCGCCGGATACGgc                 >  2:922942/1‑143 (MQ=11)
                                                                                                                           tCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGc                                       <  1:1112110/121‑1 (MQ=33)
                                                                                                                           tCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGgc                 >  1:620243/1‑143 (MQ=35)
                                                                                                                             gcgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGACCGGATAAGgcgc               >  1:799491/1‑143 (MQ=37)
                                                                                                                                 cTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGACTGTTGCCGACCCGTAGGCCGCATAAGGCGCTcgc           >  2:147207/1‑143 (MQ=255)
                                                                                                                                   tATCAGGCCTACAACTATTGCCGACCTGTAGGCCTGATAAGGCACGTGTGCCGCATCCGGCAATCAATGCCTGCTGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCgcgc         >  2:940679/1‑143 (MQ=255)
                                                                                                                                       aGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACa                                               <  1:434421/101‑1 (MQ=32)
                                                                                                                                          ccTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATcc  <  1:925369/143‑1 (MQ=255)
                                                                                                                                           cTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTtgtg                                                                                                      <  1:192121/42‑1 (MQ=40)
                                                                                                                                           |                                                                                                                                             
CATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCC  >  NC_000913/4094434‑4094714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.