Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,001,645	Δ5 bp	coding (220‑224/951 nt)	corA →	magnesium/nickel/cobalt transporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4001645	4001649	5	62 [0]	[0] 63	corA	magnesium/nickel/cobalt transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4001644	0 (0.000)	62 (0.970)	50/284	0.2	100%	coding (219/951 nt)	corA	magnesium/nickel/cobalt transporter
	?	NC_000913	4001650 =	0 (0.000)					coding (225/951 nt)	corA	magnesium/nickel/cobalt transporter

ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT  >  NC_000913/4001514‑4001792                                                                                                                                         |                                                                                                                                               tattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc                                                                                                                                          <  2:92682‑M2/7‑1 (MQ=255) ggttgatcgtgttgagccggaggacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggagctggaatacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc                                                                                                                                          <  2:248047‑M2/7‑1 (MQ=255)   ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt                                                                                                                                        >  1:469154‑M2/135‑143 (MQ=255)   ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt                                                                                                                                        <  1:166836‑M2/9‑1 (MQ=255)   ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt                                                                                                                                        <  1:738146‑M2/9‑1 (MQ=255)       tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcgtCtccttcttctgc                                                                                                                                    >  1:12536‑M2/131‑141 (MQ=255)         ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagcgcctggcacctcgcccggaactggaagacatcgaagcctaggcacgcttccttgaagacgacgaccgcctgcatCTCcttcttcttctt                                                                                                                                  >  2:1129615‑M2/129‑143 (MQ=255)         ttcttgaaccgcgcgccgacgagcgactgcgcgtacaacctgaacttggccacagcctggcaacccgcccggaactggaagccatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt                                                                                                                                  <  1:334634‑M2/15‑1 (MQ=255)         gtgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt                                                                                                                                  >  1:437244‑M2/129‑143 (MQ=255)          tgccgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt                                                                                                                                 <  1:40541‑M2/16‑1 (MQ=255)           gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg                                                                                                                                <  1:97018‑M2/17‑1 (MQ=255)              gaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAg                                                                                                                             <  1:1097078‑M2/20‑1 (MQ=255)               aaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactgggagacatcgaagcatcggcacgtttctttgaagacgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGa                                                                                                                            >  1:91576‑M2/123‑143 (MQ=255)                  cggtcgacgatgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc                                                                                                                         <  1:733947‑M2/24‑1 (MQ=255)                    gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg                                                                                                                       <  1:292823‑M2/26‑1 (MQ=255)                     acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa                                                                                                                      <  1:791499‑M2/27‑1 (MQ=255)                       gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg                                                                                                                    >  1:316040‑M2/115‑143 (MQ=255)                         cgacgggcgactgcgcgtgcaagatcaccttggccagagcctggcaacccgcccggaactgtaagacatcgtagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAt                                                                                                                  <  2:880705‑M2/31‑1 (MQ=255)                         cgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAt                                                                                                                  <  1:873257‑M2/31‑1 (MQ=255)                         cgacgagcgactgcgcgtacaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAt                                                                                                                  <  1:1044806‑M2/31‑1 (MQ=255)                            cgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGCTCAc                                                                                                               >  2:262216‑M2/110‑143 (MQ=255)                              agcgcccgcgcgcacagtgtgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttcttttaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc                                                                                                             <  2:1082652‑M2/36‑1 (MQ=255)                               gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                            <  1:760288‑M2/37‑1 (MQ=255)                               gcgactgcgcgcacaacctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                            <  1:809619‑M2/37‑1 (MQ=255)                                 gcctccgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg                                                                                                          <  2:1107449‑M2/39‑1 (MQ=255)                                 gactgcgcgtacaatctgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg                                                                                                          <  2:1002277‑M2/39‑1 (MQ=255)                                 gactgcgcctacactctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg                                                                                                          <  2:587582‑M2/39‑1 (MQ=255)                                   ctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTa                                                                                                        >  1:989551‑M2/103‑143 (MQ=255)                                    tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa                                                                                                       >  1:629023‑M2/102‑143 (MQ=255)                                      ctcgtacaatctgagcttgggcagcgcctggcaacccgcccggaacttgaagacatcgaagcatcggcacgtgtctttgcagacgacgacggcctgcatCTCCTTTTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt                                                                                                     <  2:406173‑M2/44‑1 (MQ=255)                                         gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgccggcccgcatCTCCTTCTTCGGCTTTGGCGTTGCGGAAGATCACGCCGGTAACtccc                                                                                                  >  1:210168‑M2/97‑142 (MQ=255)                                         gcacaagctgaccgtggccagagcctggcaacccgcccggaactggaagacatcgcagcctcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCa                                                                                                  <  2:241304‑M2/47‑1 (MQ=255)                                            caatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtg                                                                                               <  1:737410‑M2/50‑1 (MQ=255)                                              atctgaacggggccagagcctggcaacccgcccggagctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                             <  1:64180‑M2/52‑1 (MQ=255)                                                 tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa                                                                                          >  2:999442‑M2/89‑143 (MQ=255)                                                  gaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAt                                                                                         >  2:123980‑M2/88‑143 (MQ=255)                                                      ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaatacgatgtcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc                                                                                     >  1:162631‑M2/84‑143 (MQ=255)                                                             gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt                                                                              >  1:470598‑M2/77‑143 (MQ=255)                                                                    gcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc                                                                       <  2:537043‑M2/74‑1 (MQ=255)                                                                           gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                                <  1:496787‑M2/81‑1 (MQ=255)                                                                              cggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAc                                                             <  1:999442‑M2/84‑1 (MQ=255)                                                                              cggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAc                                                             <  1:468128‑M2/84‑1 (MQ=255)                                                                               ggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAACAACCGTGATGGTCGTCTGTTTAct                                                            >  2:975288‑M2/59‑143 (MQ=255)                                                                                      gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCGTTTACCATCCGTGATGGTGGTCTGTTTACTCTgggtg                                                     >  2:721972‑M2/52‑143 (MQ=255)                                                                                       gagcacgcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga                                                    <  2:1057180‑M2/93‑1 (MQ=255)                                                                                       cagacaccgtatcatcggcacgtttctttgaagacgacgacggcctgcatCCCCTTCTTCTTCGTTGACGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCACTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga                                                    <  2:1056252‑M2/93‑1 (MQ=255)                                                                                        agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag                                                   <  1:123980‑M2/94‑1 (MQ=255)                                                                                        agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag                                                   >  2:578221‑M2/50‑143 (MQ=255)                                                                                             tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtga                                              >  1:711501‑M2/45‑143 (MQ=255)                                                                                             tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTGCTCTgcgtgagcgtga                                              >  1:573774‑M2/45‑143 (MQ=255)                                                                                              cgaaccatcggcacgttcctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa                                             <  1:754892‑M2/100‑1 (MQ=255)                                                                                                aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTCTGCGTGAGCGTGACCt                                           >  1:555598‑M2/42‑143 (MQ=255)                                                                                                   catcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTTTGTTTACTCTGCGTGAGCGTGAGCTGcc                                        >  1:533692‑M2/39‑143 (MQ=255)                                                                                                      cggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCTGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGc                                     <  2:346231‑M2/108‑1 (MQ=255)                                                                                                        gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAGGGTCGTCTGTTTACTCTGCGTGTGCGTGAGCTGCCGGctg                                   >  1:1082065‑M2/34‑142 (MQ=255)                                                                                                            gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGACGGTCGTCTGTTTACTCGGCGTCAGCGAGAAATGCCCGCCTTTCg                               >  2:201923‑M2/30‑143 (MQ=255)                                                                                                             tttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt                              <  1:611572‑M2/115‑1 (MQ=255)                                                                                                             ttgggttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt                              <  1:146815‑M2/115‑1 (MQ=255)                                                                                                                    gaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACCGCCCGCGTTTCGTCTGTATc                       >  2:1056854‑M2/22‑143 (MQ=255)                                                                                                                       gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATGCCGTTATTACGCCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa                    <  1:262216‑M2/125‑1 (MQ=255)                                                                                                                                ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTGTTTACTCTGCGTGAGCGTGAATTGCCCGCTTTTCGTATGTATCGTATGCGTGacc           >  2:960992‑M2/10‑143 (MQ=255)                                                                                                                                        tCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTGTCGTCTGTATCGTATGCATGCCCGGACCCAg   >  2:334713‑M2/2‑143 (MQ=255)                                                                                                                                         cTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGt  >  1:254493/1‑143 (MQ=255)                                                                                                                                         |                                                                                                                                               ATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT  >  NC_000913/4001514‑4001792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑