Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,088,438 A→G 9.7% V473A (GTC→GCC)  frvR ← putative frv operon regulator; contains a PTS EIIA domain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,088,4380AG 9.7% 364.6 / 2.4 128V473A (GTC→GCC) frvRputative frv operon regulator; contains a PTS EIIA domain
Reads supporting (aligned to +/- strand):  ref base A (28/83);  new base G (13/2);  total (43/85)
Fisher's exact test for biased strand distribution p-value = 6.41e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 128 total aligned reads displayed.

AATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACG  >  NC_000913/4088204‑4088672
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             
aaTATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTaa                                                                                                                                                                                                                                           <  1:148253/239‑1 (MQ=255)
 atatTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAAt                                                                                                                                                                                                                                         <  1:146053/239‑1 (MQ=255)
     ttttAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGAGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAGTATGGTGTTGTGCGGCTAATTgcg                                                                                                                                                                                                                                     >  1:549413/1‑239 (MQ=255)
               tGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTg                                                                                                                                                                                                                           <  1:838862/239‑1 (MQ=255)
               tGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTg                                                                                                                                                                                                                           <  1:948552/239‑1 (MQ=255)
                ggcgggcATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAAGGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGc                                                                                                                                                                                                                          <  2:338817/234‑1 (MQ=255)
                  cgcgCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGcc                                                                                                                                                                                                                         <  2:498419/238‑1 (MQ=255)
                               cggcgCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTg                                                                                                                                                                                                           <  1:547040/238‑1 (MQ=255)
                                 gcgcAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTTATATTGTGGTTTGCGGCTAATTTGGCACAAATTTGCCGGGGAATATTGTTGcc                                                                                                                                                                                                         >  1:300144/1‑239 (MQ=255)
                                        cggtCAAGACATGGTTAATGACTTCGTTATTCACATCAACTGTGTGGGCGAGGGTAATAAAAAATCCACGAAAACTTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCATCAGCGGCGGTAATATGGTGTTGTGCTACTAATTGCGCACAAATTTGCCGGGTAATTTGTTGCCAGCttt                                                                                                                                                                                                   <  2:629997/234‑1 (MQ=255)
                                           tCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTg                                                                                                                                                                                                                           <  1:456701/211‑1 (MQ=255)
                                            cAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATAATGTGTTGTGCGGCTAATTGCGCACAAATTTGCCGGGTAATATGTTTCCGCCtttgcaccc                                                                                                                                                                                             >  1:257097/1‑233 (MQ=255)
                                             aaGACATGGTTAATGACTTCTGTATTCACCTTAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACcgcg                                                                                                                                                                                            <  2:1213632/239‑1 (MQ=255)
                                             aaGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACcgcg                                                                                                                                                                                            <  2:1148342/239‑1 (MQ=255)
                                                 cATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGTCGGTAATATGGTGTTGTGCGGCGAATTTGGGCCCAAATTGCCCGGGAATATGTTGTCAGCtttttcctcggtca                                                                                                                                                                                        >  2:142084/1‑228 (MQ=255)
                                                 cATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACa                                                                                                                                                                                        <  1:142084/239‑1 (MQ=255)
                                                    ggTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGGCAAATTGGGGTTTGTGACAAATTTGGCACAAAATTTCCGGGGAAAATGTTTGCAGCTTTCACCACGGACaatt                                                                                                                                                                                     >  1:493888/1‑236 (MQ=255)
                                                     gTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGAAATTATGTGTTGTGCGGCCAATTTTGCGCAAATTTGTCGGGGGAAATGTTTTCTGCGTTTACCCGGTACAtta                                                                                                                                                                                     >  2:1026514/1‑237 (MQ=255)
                                                       tAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGa                                                                                                                                                                                   <  2:483358/238‑1 (MQ=255)
                                                             cTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCAGCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGa                                                                                                                                                                            <  1:796831/239‑1 (MQ=255)
                                                              ttCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTTGGCCTAATTGTGCCCAAATTTGCTGGGCAATATGTTGTCAGCTTTTTCCGCGTCCATTTCAATAATaaa                                                                                                                                                                           >  1:708612/1‑239 (MQ=255)
                                                              ttCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGc                                                                                                                                                                                                                          <  1:140433/193‑1 (MQ=255)
                                                              ttCGTTATTCACCTCAACTGGTTGGGCGAAGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGaa                                                                                                                                                                           <  2:624533/239‑1 (MQ=255)
                                                               tCGTTAGTCACCTCAACTGGTTGGGCGCGGGTAATAAAAAAGCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGaaa                                                                                                                                                                          <  2:281107/239‑1 (MQ=255)
                                                                cGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGAGATATGGTGGTGTGCGACTAATTGTGTACAAATTTTCCGGGGAATATTTTGTCAGCCTTTACCGCGTGCAATCGAATAATAaaaa                                                                                                                                                                         >  2:294658/1‑239 (MQ=255)
                                                                            cAACTGGGTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCa                                                                                                                                                            <  1:480079/239‑1 (MQ=255)
                                                                                  gTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGaata                                                                                                                                                                                <  1:321874/214‑1 (MQ=255)
                                                                                  gTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGGGTTGTGCGACTAATTGCGCTCAAATTTGCCGGGGAATATGTTGTCAGCTTTCACCGCGTCCATTCGAATAATGAAAAATTCCGGGGGGGGAGaaa                                                                                                                                                      >  2:777667/1‑239 (MQ=255)
                                                                                    tGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTCATATTGTGGTGTTCGAGTAACTGTGGATAAAATTTCCCGGTAATATTTTTGCAGTTTTTAACCCGTCCCATCCAATAATGAAAAAATTCGGGGGccggtgaaaa                                                                                                                                                    >  2:425529/1‑230 (MQ=255)
                                                                                         gAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCt                                                                                                                                               <  1:69203/239‑1 (MQ=255)
                                                                                                    aaaaTCCACTAAAACGTCGCGCCTGCTCGCTCAAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTgg                                                                                                                                    <  1:42964/239‑1 (MQ=255)
                                                                                                    aaaaGCCACAAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGAGTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTgg                                                                                                                                    <  1:1001862/239‑1 (MQ=255)
                                                                                                       aTCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGGCTAATTGCGCACAAATTTTCCGGGGAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAAATTTCGGGGGCAGGGGAAAAACGCTCCGGCTGGTGGCGa                                                                                                                                 >  1:76591/1‑239 (MQ=255)
                                                                                                         ccACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTTATATGGTGTTGTGCGACTTATTGTGCGCAAATTTTCCGGGGAAAATGTTGCCCGCTTTCTCCTCGTACATTCGAATAATGAAAAATTTCGCGGGCGGGGAAAAAACACTCCCGCTGTTGGGGaaa                                                                                                                               >  2:1182272/1‑238 (MQ=255)
                                                                                                                  cGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGCGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGGGACTCATTGCGCACAAATTTGCCGGGTAATATTTTTTCATCTTTTTCCGCGTACATTCTAATAATTTAAACTTTCCTGGGCCAGGCAAAAACGCTCCCGCTGTTTGGGCATAAAtctcgt                                                                                                                      >  2:192603/1‑234 (MQ=255)
                                                                                                                       cTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGTGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGa                                                                                                                                                                                   <  1:1041045/174‑1 (MQ=255)
                                                                                                                         ccTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGa                                                                                                               <  2:386722/239‑1 (MQ=255)
                                                                                                                         ccTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGa                                                                                                               <  2:320292/239‑1 (MQ=255)
                                                                                                                          cgctgctgtCCAGCAATGTGGGATTGCGAGGCGATTCACAATCACGTTTTCACTTTCGCGTTCTCGGGCGATGATGCGTTGTGCTTTATCGGCGGTAATATGGTGTTTTGCGACTAATTGCGCACAAATTTGACGGGTAATATGGTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCGCCGGCTGTTGGCGAATAAATGCCGTCGCCAGa                                                                                                               <  2:1134785/230‑1 (MQ=255)
                                                                                                                          cTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGaa                                                                                                              <  1:425529/239‑1 (MQ=255)
                                                                                                                           tGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGaaa                                                                                                             <  1:176024/239‑1 (MQ=255)
                                                                                                                            gTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGaaaa                                                                                                            <  1:777667/239‑1 (MQ=255)
                                                                                                                                    cAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGCTATATGGTGGTGTGCGGCTAATTGCTCCCAAATTTTTCCGGTAATATTTTTTCAGCTTTTACCGCGTACATTCGTATTATGGAAAATTTCCGGGGCAGAGGAAAAAAGCCCCGGCCGTTGGGGGATAAAATCCGGCGCCCGGAAAAGtttttt                                                                                                    >  2:242000/1‑237 (MQ=255)
                                                                                                                                          tgtgGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATTTGGTGTTGGGCGGCTAATTGCCGCCAAATTTTCCGGGGGATAAGTTGGCAGCTTTCCCCGCGTGCATTCGAATAATTAAAACTTCCGGGGGGAGGGAAAAAACGCGCCGTCTTGTGGGGAATTAATACCGTAGCCAGAAAATGTTTTAtttttt                                                                                               >  2:785606/1‑238 (MQ=255)
                                                                                                                                            tgGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATTGTGGTGTGCGACTAATTGGGCCCAAATTTTGCGGGTGTTATTTTGTCCGCTTTTACCCCCTACATTTGTATCATTAAAAATTTTGGGGGGAGAGAAAAAACACCCCGGCGGGTGGGGGATAAAATCCGGCGCCAGGAAAATATTTATTTTTTTGa                                                                                            >  2:432521/1‑239 (MQ=255)
                                                                                                                                            tgGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGCAATATGGGGTTGTGCGACTTATTGTGCCCAAATTTTCCGGGGAATATTTTGTCACCGTTCACCGCGTACATTTGAATAATGCACAATTCCGGGGGGGGAGGAAAAACGCCCCGGCTGGTTTCGGACAAATTGCGTCGCCAGGAAATGGTTTATTTTTTTGa                                                                                            >  2:860797/1‑239 (MQ=255)
                                                                                                                                                   gcgaggcgaTTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCgg                                                                                      <  2:1007052/238‑1 (MQ=255)
                                                                                                                                                      gggcgaTGAACAAGCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATTGTGTTGTGCGGCTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAg                                                                                   <  1:643450/237‑1 (MQ=255)
                                                                                                                                                       ggcgaTTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGc                                                                                  <  1:934337/238‑1 (MQ=255)
                                                                                                                                                               aCAATCAGGTTTTCAGCTTCGGCTTCGCGGGCGATTATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGat                                                                         <  2:643484/239‑1 (MQ=255)
                                                                                                                                                               aCAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGGTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGat                                                                         <  1:1207634/239‑1 (MQ=255)
                                                                                                                                                                        ttttCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTa                                                                 <  1:776300/238‑1 (MQ=255)
                                                                                                                                                                        ttttCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTa                                                                 <  1:294029/238‑1 (MQ=255)
                                                                                                                                                                         tttCTCCGTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGTGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACg                                                               <  2:747838/239‑1 (MQ=255)
                                                                                                                                                                          ttCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACgg                                                              <  1:192603/239‑1 (MQ=255)
                                                                                                                                                                          ttCACCTTCGCCGTCGCGTGCGATGATGCGTTGTGCTTCAACGGCGGTAATATGGTGGTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAATTGTTTTATTTGTTCGATACCGGCAGCCGTAATGATAGTTTTTACgg                                                              <  1:449867/239‑1 (MQ=255)
                                                                                                                                                                          tgccccttcgccttcgCGGGCGATGATGCGTTGTTGTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCTATACCGGCAGCCGTAATGATATTTTTTACgg                                                              <  1:1180266/235‑1 (MQ=255)
                                                                                                                                                                           tCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGt                                                             <  2:155587/239‑1 (MQ=255)
                                                                                                                                                                           tCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGt                                                             <  1:1024498/239‑1 (MQ=255)
                                                                                                                                                                             aCCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGa                                                           <  1:185682/239‑1 (MQ=255)
                                                                                                                                                                               cttcgccttcgcGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATg                                                         <  1:702107/239‑1 (MQ=255)
                                                                                                                                                                               cttcgcctgcgcGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATg                                                         <  2:1148743/239‑1 (MQ=255)
                                                                                                                                                                               cctcgccttcgcGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATg                                                         <  1:333603/237‑1 (MQ=255)
                                                                                                                                                                                         gcgGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATTGTGTTGTGGGACTAATTGCGCACAAATTTTCCGGGGGATATGTTGCCAGCTTTCTCCCCGTACATTCGAATAAAGAAAAATTCCGGGGGGCGAGAAAAAAAGCTCCCGCTGTTGGCGAAAAAATGCCGGCGCCAGAAAAAGTTTTATTTTTTTGCTACCGGCACCCGTAATGATATTTTTTTATGGGATGTTATTAtttt                                               >  2:962852/1‑238 (MQ=255)
                                                                                                                                                                                          cgGGCGATGATGCGGTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTa                                               <  2:329084/238‑1 (MQ=255)
                                                                                                                                                                                               gatgatGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGTTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCTGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACcgcg                                          <  2:709638/238‑1 (MQ=255)
                                                                                                                                                                                                 tgatgCGTTGTGGATCATCGGCGGTAATTTGGTGTTGGGCGGCTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCATCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCa                                       <  1:244145/239‑1 (MQ=255)
                                                                                                                                                                                                 tgatgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTc                                        <  1:860797/238‑1 (MQ=255)
                                                                                                                                                                                                 tgatgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTc                                        <  1:432521/238‑1 (MQ=255)
                                                                                                                                                                                                 tgatgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTc                                        <  1:843429/238‑1 (MQ=255)
                                                                                                                                                                                                  gatgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCAt                                      <  2:1065844/239‑1 (MQ=255)
                                                                                                                                                                                                   atgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACgg                                                              <  1:1122298/214‑1 (MQ=255)
                                                                                                                                                                                                    tgCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATc                                     <  2:517250/238‑1 (MQ=255)
                                                                                                                                                                                                     gCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCa                                   <  2:336205/239‑1 (MQ=255)
                                                                                                                                                                                                           tgCTTCATCGGCGGTAATATGGTGTTTTGCTACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCACCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAaat                             <  2:226530/239‑1 (MQ=255)
                                                                                                                                                                                                                          aaTATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTaa              <  2:238467/239‑1 (MQ=255)
                                                                                                                                                                                                                          aaTATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTaa              <  1:1050057/239‑1 (MQ=255)
                                                                                                                                                                                                                          aaTATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTa               <  1:259692/238‑1 (MQ=255)
                                                                                                                                                                                                                          aaTATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTa               <  2:708612/238‑1 (MQ=255)
                                                                                                                                                                                                                            tatGGGGTTGGGCGACTAATTTCACACAAAATTGCCCGGGAATATGTTGCGAGCTTTTCACGCGTACATTCGAATAATGAAAACTTTCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTTGATTTCGGCCAGCGTAAAGATTTTTTTTACGGTTATTTAATTATTTTCCCGCTCCTCCCGTAAATAATTGTTgtttttttat            >  2:962877/1‑235 (MQ=255)
                                                                                                                                                                                                                               tgtgtTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATc         <  2:1040888/238‑1 (MQ=255)
                                                                                                                                                                                                                               ggTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATc         <  1:962852/239‑1 (MQ=255)
                                                                                                                                                                                                                                 tgttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGACGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTATTGATCaa       >  2:155073/1‑239 (MQ=255)
                                                                                                                                                                                                                                  gttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATTAAt      >  2:248284/1‑239 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAACACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATCTTTTTTACGTTGATGTAATTATTTACCGCGTCATCCACTAAATAATGGCTGGTGTTAATGATAAATa     >  2:430168/1‑239 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCt                                                                                                                                               <  1:402276/101‑1 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCt                                                                                                                                               >  2:402276/1‑101 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTa                                <  2:397163/212‑1 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTaa              <  2:581225/230‑1 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTaa              >  1:581225/1‑230 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATa     >  2:1150709/1‑239 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATAAATa     >  2:64825/1‑239 (MQ=255)
                                                                                                                                                                                                                                   ttgtGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGAGGCCGTAATGCTATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGGAAATAATGTCTGGTGTTAATGATCAATa     >  2:1184752/1‑239 (MQ=255)
                                                                                                                                                                                                                                     gtgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAAc   <  1:118911/239‑1 (MQ=255)
                                                                                                                                                                                                                                      tgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACg  >  1:1164136/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACg  >  2:924703/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACg  >  2:251163/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGGTGTTAATGCTCAATAACg  >  1:11898/1‑239 (MQ=255)
                                                                                                                                                                                                                                      tgCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACAGCGTCATCCAGTAAATAATTGCTGTTGTTAATGATTAATAAca  >  2:853898/1‑238 (MQ=255)
                                                                                                                                                                                                                                        cGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACg  >  1:117140/1‑237 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             
AATATTTTTAGCTCATGACGCGCATCGGCGGCGGCGCAGGCGATCAAGACATGGTTAATGACTTCGTTATTCACCTCAACTGGTTGGGCGAGGGTAATAAAAAATCCACGAAAACGTCGCTCCTGTTCGCTCCAGCAATGTGGGATGGCGAGGCGATTAACAATCAGGTTTTCACCTTCGCCTTCGCGGGCGATGATGCGTTGTGCTTCATCGGCGGTAATATGGTGTTGTGCGACTAATTGCGCACAAATTTGCCGGGTAATATGTTGCCAGCTTTCACCGCGTACATTCGAATAATGAAAACTTCCGGGGGCAGAGAAAAAACGCTCCGGCTGTTGGCGAATAAATGCCGTCGCCAGAAAATGTTTTATTTGTTCGATACCGGCAGCCGTAATGATATTTTTTACGGTGATGTAATTATTTACCGCGTCATCCAGTAAATAATGGCTGTTGTTAATGATCAATAACG  >  NC_000913/4088204‑4088672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: