breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (lowest skew 10 of 12 shown)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4333587139 (1.060)3 (0.020) 3/496 NT 2.1% coding (364/669 nt) basR response regulator in two‑component regulatory system with BasS
?NC_000913 = 4333605 139 (1.090)coding (346/669 nt) basR response regulator in two‑component regulatory system with BasS
* ? NC_000913 = 4309625141 (1.080)6 (0.050) 6/494 NT 4.1% coding (1356/1533 nt) alsA D‑allose ABC transporter ATPase
?NC_000913 = 4309649 143 (1.130)coding (1332/1533 nt) alsA D‑allose ABC transporter ATPase
* ? NC_000913 4278540 =149 (1.140)3 (0.020) 3/504 NT 2.0% coding (62/1350 nt) ghxP guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter
?NC_000913 4278550 = 146 (1.130)coding (72/1350 nt) ghxP guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter
* ? NC_000913 = 2465473138 (1.060)3 (0.020) 3/492 NT 2.2% coding (173/933 nt) yfdC putative inner membrane protein
?NC_000913 = 2465486 134 (1.060)coding (186/933 nt) yfdC putative inner membrane protein
* ? NC_000913 2306060 =141 (1.080)4 (0.030) 4/496 NT 2.8% coding (695/1647 nt) mqo malate dehydrogenase, FAD/NAD(P)‑binding domain
?NC_000913 2306080 = 138 (1.090)coding (675/1647 nt) mqo malate dehydrogenase, FAD/NAD(P)‑binding domain
* ? NC_000913 = 1918972106 (0.830)5 (0.040)
+AGGTG
3/486 NT 4.5% coding (1463/2634 nt) yebT MCE domain protein
?NC_000913 1918973 = 107 (0.820)coding (1464/2634 nt) yebT MCE domain protein
* ? NC_000913 = 1709005107 (0.820)3 (0.020) 3/510 NT 2.7% coding (2087/2223 nt) rsxC SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
?NC_000913 1709009 = 110 (0.840)coding (2091/2223 nt) rsxC SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
* ? NC_000913 1045201 =184 (1.410)5 (0.040) 5/492 NT 2.6% coding (603/1140 nt) gfcE putative O‑antigen capsule outer membrane auxillary protein export channel
?NC_000913 1045310 = 191 (1.520)coding (494/1140 nt) gfcE putative O‑antigen capsule outer membrane auxillary protein export channel
* ? NC_000913 = 614970120 (0.920)3 (0.020) 3/494 NT 2.5% coding (814/3882 nt) entF enterobactin synthase multienzyme complex component, ATP‑dependent
?NC_000913 = 614997 116 (0.920)coding (841/3882 nt) entF enterobactin synthase multienzyme complex component, ATP‑dependent
* ? NC_000913 501375 =124 (0.950)3 (0.020)
+C
3/508 NT 2.2% coding (1251/1305 nt) gsk inosine/guanosine kinase
?NC_000913 502046 = 148 (1.130)coding (1193/1677 nt) ybaL inner membrane putative NAD(P)‑binding transporter