Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,815,859 Δ82 bp [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815859 3815940 82 67 [0] [0] 67 [rph]–[rph] [rph],[rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158580 (0.000)63 (1.020) 50/264 0.2 100% pseudogene (24/48 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
?NC_000913 3815941 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000
                                                                                                                                             |                                                                                                                                              
acccctgcTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTCCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCc                                                                                                                                               <  1:463892‑M1/140‑2 (MQ=255)
acacCTGCGTGCTCAGCGCAAATCCACTAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTCGCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCc                                                                                                                                               <  1:508232‑M1/143‑2 (MQ=255)
 cacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcg                                                                                                                                              >  1:577718‑M1/1‑141 (MQ=255)
    cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAACTCAGTTTACCAGCGCCGCCTTCTCCcgtcc                                                                                                                                           >  2:581366‑M1/1‑138 (MQ=255)
    cTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcc                                                                                                                                           >  1:519417‑M1/1‑138 (MQ=255)
     tgcttgctAAGCGCAAATTCAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccc                                                                                                                                          <  1:9648‑M1/143‑7 (MQ=255)
       tttgctaTCCGCAACTTCAATTAGCTGGCGCTGATTTGTTTTCATGCCTTCGCTCCGCATCTTACGTTTCTTCAGACAAATAACAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccct                                                                                                                                        <  2:417092‑M1/142‑9 (MQ=255)
          gctACGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgca                                                                                                                                     <  1:538909‑M1/143‑12 (MQ=255)
             aaGCGCAAATTCAATAAACTGGAGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGCTTGCCAGCGCCGCCTTCTGCcctcccctccactt                                                                                                                                  >  2:820704‑M1/1‑129 (MQ=255)
               gcgcAAATTCAGTAAACTGGCGCTCATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttca                                                                                                                                <  1:452061‑M1/143‑17 (MQ=255)
                cgcAACTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               <  1:731877‑M1/143‑18 (MQ=255)
                cgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaa                                                                                                                               >  1:726152‑M1/1‑126 (MQ=255)
                   aaaTTTCATAAACTGGCGCGGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga                                                                                                                            <  2:285239‑M1/143‑21 (MQ=255)
                   aaaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatga                                                                                                                            >  1:1059942‑M1/1‑123 (MQ=255)
                    aaTTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCCGTCGCCTTAAAAATCATTTTGCCAGCGCCGCCTTCTGCcgtccactgcacttcaatgat                                                                                                                           >  1:292272‑M1/1‑122 (MQ=255)
                          atgtgctggcgCTGATATGGTTTCATGCATGTTCTCTGCATCCCACTCTGCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                     <  2:576476‑M1/138‑28 (MQ=255)
                          aTAATCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtctcctgcacttcaatgatgcgccc                                                                                                                     <  2:1054986‑M1/143‑28 (MQ=255)
                          aTAAAGTGGCGCTGATATGGTTTCATGCCTGCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgccc                                                                                                                     <  1:409379‑M1/143‑28 (MQ=255)
                           tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccg                                                                                                                    >  1:35652‑M1/1‑115 (MQ=255)
                             aaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctacacctccacgatgcgcccgac                                                                                                                  >  2:146322‑M1/1‑113 (MQ=255)
                                tGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttc                                                                                                               <  2:27475‑M1/143‑34 (MQ=255)
                                 ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcg                                                                                                              <  1:222045‑M1/143‑35 (MQ=255)
                                     cTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAACGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatcatgcgcccgtcttcggtca                                                                                                          >  2:141350‑M1/1‑105 (MQ=255)
                                     cTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgagcccgtcttcggtca                                                                                                          >  2:139939‑M1/1‑105 (MQ=255)
                                       gATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAGAAAAAGGCGACTCAGCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatc                                                                                                        <  1:275160‑M1/143‑41 (MQ=255)
                                         tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcactgctgctcccgtcttccgtcatcac                                                                                                      >  1:1028166‑M1/1‑101 (MQ=255)
                                         tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatacgcccgccttcggtcatccc                                                                                                      >  1:523182‑M1/1‑101 (MQ=255)
                                                  aTGCCTTCGCTCCTCAACTTACTTTTCGACAGACAAAAAAAAGGCGACTCATCGGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcat                                                                                             <  2:615377‑M1/143‑52 (MQ=255)
                                                             cctcATCTTACTTCTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctg                                                                                  <  2:44070‑M1/143‑63 (MQ=255)
                                                               tcATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTGAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcg                                                                                <  2:1119405‑M1/143‑65 (MQ=255)
                                                                cATCTTACTTTTCTACAGACAAAAAACAGGCGACTCCTCCGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcgg                                                                               <  1:14179‑M1/143‑66 (MQ=255)
                                                                    ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTGGTCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  2:1017205‑M1/143‑70 (MQ=255)
                                                                    ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactccgttcatgccggtctctgcggcaga                                                                           >  1:414888‑M1/1‑74 (MQ=255)
                                                                    ttACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggccatcactacgttcatgtcggtctctgcggcagg                                                                           >  1:574606‑M1/1‑74 (MQ=255)
                                                                    gtaCTTGTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcaga                                                                           <  2:950387‑M1/142‑70 (MQ=255)
                                                                        ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  2:84319‑M1/1‑70 (MQ=255)
                                                                        ttttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtccactgcagacctatgatgcgcgcgtcttcggacatcactacgttcatgtcggtctctgcggcagagtct                                                                       >  1:444986‑M1/1‑70 (MQ=255)
                                                                          ttCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttc                                                                     <  1:1013139‑M1/143‑76 (MQ=255)
                                                                           tCTACACACAAAAACACGGCGACTTATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcttcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttca                                                                    <  2:114918‑M1/143‑77 (MQ=255)
                                                                             tACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagcgtcttcaac                                                                  >  1:1093346‑M1/1‑65 (MQ=255)
                                                                                  aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcgcctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagaggcttcaacgtatt                                                             >  1:66839‑M1/1‑60 (MQ=255)
                                                                                  aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                             <  1:855598‑M1/143‑84 (MQ=255)
                                                                                  aCAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcacgacgttcatgtcggtctctgcggcagagtcttcaacgtatt                                                             >  1:64001‑M1/1‑60 (MQ=255)
                                                                                     aaaaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcgatcatcactacgttcatgtaggtctctgcggcagagtcttcaacgtattcca                                                          >  1:1056289‑M1/1‑57 (MQ=255)
                                                                                       aaaaaGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctacactgcaatgatgcgcccgtctccggccatcactccgttcatgtcggtctctgcggcagagcctccaacgtgttcccga                                                        >  2:17674‑M1/1‑55 (MQ=255)
                                                                                        aaaaGGCGGCTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagat                                                       <  2:888908‑M1/143‑90 (MQ=255)
                                                                                               gACTCTTCAGTCGCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaac                                                <  2:875504‑M1/143‑97 (MQ=255)
                                                                                               gACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgtgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaac                                                <  2:753314‑M1/143‑97 (MQ=255)
                                                                                                    atcaGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgctt                                           >  1:369882‑M1/1‑42 (MQ=255)
                                                                                                     tccgtcgCCTTAAAAATCAGGTTGCCAGCGCCGGCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttc                                          <  2:1015588‑M1/140‑103 (MQ=255)
                                                                                                     gcagTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttc                                          <  1:1001625‑M1/142‑103 (MQ=255)
                                                                                                        gTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgcc                                       <  1:621987‑M1/143‑106 (MQ=255)
                                                                                                           gCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaacctcttcgccgtt                                    >  1:437637‑M1/1‑35 (MQ=255)
                                                                                                                aaaaaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgctgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaa                               <  1:1023185‑M1/143‑114 (MQ=255)
                                                                                                                   aaTCAGTTTGCCAGCGCCGCCTTCTGCcgtcccccgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatcccactctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattc                            <  1:391487‑M1/143‑117 (MQ=255)
                                                                                                                    aTCAGTTTGCCAGCGCCGCCTTCTGCcgtcacctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcgggctctgcggcagagtcttcaacgtattccagatcgcaaacggctttgcggtgcagaattcc                           >  1:454061‑M1/1‑26 (MQ=255)
                                                                                                                      cgggttcccagggcccCCTTCCGCcgtcccctgcactgcgatgatgcgcccgtcttccgtcatcactacgctcatggcgggctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga                         <  2:1199508‑M1/136‑120 (MQ=255)
                                                                                                                      cAGTTTGCCAGCGCCGCTTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcacgacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccga                         <  1:567150‑M1/143‑120 (MQ=255)
                                                                                                                         tttGCCAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttccacgtattcctgttcgcaaacagcttcgcctttcaaaattaccacag                      >  1:135505‑M1/1‑21 (MQ=255)
                                                                                                                             ccAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaac                  >  1:770441‑M1/1‑17 (MQ=255)
                                                                                                                              cAGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcacgacttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtatgccagatcacagaccgcttggccgttcacaaatcagacggagaac                 >  2:83944‑M1/1‑16 (MQ=255)
                                                                                                                               aGCGCCGCCTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttgggtcatcactacgttcctgtgggtcgctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacacttccgccaggacctg                >  1:92761‑M1/1‑15 (MQ=255)
                                                                                                                                 ccccccctcctcccgtccccggcacctcaatcgtccccccgtcttcggtcctcactaccttcatgtcggtctctgcggcagagtcttcaacgtatcccagatcgcaaaccgcctcgccgttcacaattccgacagaaactgcg              <  2:1021725‑M1/138‑131 (MQ=255)
                                                                                                                                  gccgccTTCTGCcgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgg             <  1:203980‑M1/143‑132 (MQ=255)
                                                                                                                                    cgccTTCTGCcgtcccctgcacttcaaggatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcggct           <  1:767398‑M1/143‑134 (MQ=255)
                                                                                                                                            gCcgtcccatgcacttgattgatgcgtccgtcttcggtcatcactccgttcatgtcggtcgctgcggcagagtcttcaacgtattccagatcgcaacccgcttcgccgttcacaatttcgacagaaactgcggctaccatccc   <  2:1114792‑M1/143‑142 (MQ=255)
                                                                                                                                             ccgtcccctgcacttcaatgatgcgcccgtcttcggtcatcactacgttcatgtcggtctctgcggcagagtcttcaacgtattccagatcgcaaaccgcttcgccgttcacaattccgacagaaactgcgcctaccatccct  >  1:896186‑M1/1‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
ACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTC  >  NC_000913/3815717‑3816000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.