New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3877665NA (NA)4 (0.060) 4/270 9.2 NA noncoding (80/98 nt) RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3877676 NA (NA)noncoding (91/98 nt) RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 163 total aligned reads displayed.

CAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCATCTTT  >  NC_000913/3877536‑3877818
                                                                                                                                            |                                                                                                                                               
cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCAt                                                                                                                                               <  1:709620/143‑1 (MQ=255)
 aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTAACGTGCCTGCAACCTCACGAAACTTCAATACATTGCAAGATTTTGGTAGGTCTGATAAGCGTAGCGCAta                                                                                                                                              >  2:532323/1‑142 (MQ=37)
  taactAAACAGGGCGGAGATGCTCTCCGCCCTTTTCTTATAGCTTCTTTCCGTATGCGGCGTGAACGCCTTATCCGGCTTAGAAAATCATTAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCa                                                                                                                                             <  2:538992/139‑1 (MQ=21)
  gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAGTTTCGTAAGCCTGATAAGCCTAACGCATCa                                                                                                                                             >  2:1039625/1‑143 (MQ=255)
  aaaaTAAAAATTGCGGAGATGATCTTCTCTTTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCTGCTTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCa                                                                                                                                             <  2:209335/142‑1 (MQ=21)
    aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                                           <  2:457334/143‑1 (MQ=255)
    aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                                           <  1:567939/143‑1 (MQ=255)
     aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCGTATAGGTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCGATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                                                                          >  1:590623/1‑143 (MQ=255)
        aaaaGGGCGGATATGTTCTCCGCCCTTTTCTTAAAGCTTCTTGCCGGATGCCTGACCGACCCGGTTTCCGGCCTACAAATTCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACg                                                                                                                                       <  1:875157/143‑1 (MQ=18)
        aaaaGGGCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTCCAAGCTTTTCGAAGGCCTGATAAGCGTAGCGCATCGAGCACg                                                                                                                                       >  2:234740/1‑143 (MQ=25)
         aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCAGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCACGATTTTCGTAGGCCTGATAAGCGTCGCGCATCAGGCACGc                                                                                                                                      >  2:685754/1‑143 (MQ=255)
           aGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATCCATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTc                                                                                                                                    <  1:824568/143‑1 (MQ=255)
               cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCAt                                                                                                                                <  1:210773/143‑1 (MQ=255)
                   ggtgatTTCCGCCCTTATCTTATAGCTTCTTGCCGGATGCGTCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGtt                                                                                                                            <  2:285217/141‑1 (MQ=255)
                    atgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTa                                                                                                                           >  2:828279/1‑143 (MQ=255)
                      gatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgc                                                                                                                         >  1:180013/1‑143 (MQ=255)
                       ctctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg                                                                                                                        <  1:379122/142‑1 (MQ=255)
                        tctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACACAATCATGAAAATTCAATACATTGCAAGCTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcgc                                                                                                                       >  2:290484/1‑143 (MQ=255)
                         ctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGAGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGACACGCACGCACGCTTAGCGcc                                                                                                                      >  2:796572/1‑143 (MQ=21)
                           ccGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGCACGCCTTATCCGGCCTACAAAATCATGAAAATTCACTACATTGCAAGATTTTCGTAGGCCGGATAAGCGTAGCCCATCGAGCACGCCCGCATCGTTAgcgcgct                                                                                                                    >  2:498989/1‑140 (MQ=21)
                              cccTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTaa                                                                                                                 >  1:831663/1‑143 (MQ=255)
                               ccTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAACTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTcaa                                                                                                                >  2:762106/1‑143 (MQ=255)
                               ccTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCACTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTaaa                                                                                                                >  2:413653/1‑143 (MQ=255)
                                  tttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAatat                                                                                                             <  1:1172279/143‑1 (MQ=255)
                                  tttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAatat                                                                                                             <  1:363325/143‑1 (MQ=255)
                                    tCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCACATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCg                                                                                                           <  1:280333/143‑1 (MQ=255)
                                         taGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAtt                                                                                                      >  1:1129728/1‑143 (MQ=255)
                                          aGCTTTTTGCCGAATGCGGCGTGAACGCCTTTTCCGGCCTACAAAAGCATGAAAAGTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTc                                                                                                     <  2:1094830/143‑1 (MQ=21)
                                          aGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTc                                                                                                     <  1:775034/143‑1 (MQ=255)
                                            cttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgc                                                                                                   <  2:941238/143‑1 (MQ=255)
                                             ttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgcc                                                                                                  >  1:416684/1‑143 (MQ=255)
                                              tcttGCCGGAGGCGCCGTGAACGCCGTATCCGACCTACCAAAGCATGCAACGTCAATACAATGCAAGATTGTCGTAGGCCTGATAAGCGTAGAGCATCAGGTACAGGGACAAGATGATGCCCATTAAATATCGATATTcgccg                                                                                                 <  2:370288/143‑1 (MQ=9)
                                                  gCCGGGTGCGGCGGGAGCGCCTTATCCGGGCTACAAAAGCGTGAAAATTCAAGACATTGCAAGATTTTCGTAGGCCGGCTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt                                                                                             <  2:302649/143‑1 (MQ=25)
                                                   ccagATGTGGCGTGATCGCCGTATCCGGCCTACAAAATCATAAAACGCCTATTCACTGCGAGATTTTCGTAGGCGTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTc                                                                                            <  2:194297/140‑1 (MQ=25)
                                                   ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATCTTCGCCGCTTTc                                                                                            >  1:644359/1‑143 (MQ=255)
                                                   ccGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGAAAGATTTTCGTAGGCCGGATAAGCGTAGCGCATCAGGCGCGCGAGGATGGTTAGAGCAAGTAAATGACGATATTGGCCAGTTTc                                                                                            >  1:468971/1‑143 (MQ=12)
                                                    gggATGCGGCGTGAACGCCTTACCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGCTTTTCGCACGTCTCACACGCGTATTTTGTCATGCACGCTCGCATGGTTAGTGCCATTAAATATCGATATTCGCCGCTTTCa                                                                                           <  2:1171530/142‑1 (MQ=21)
                                                    cGGATGCGGCGTGGACGCCGGATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCAGGGTTAGCGCCATTAAATATCGATATTCGCCGCTGTCa                                                                                           <  1:619746/143‑1 (MQ=25)
                                                      gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAGTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAACTATCGATATTCGCCGCTTTCAgg                                                                                         >  1:911364/1‑143 (MQ=255)
                                                      gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCACTAAATATCGATATTCGCCGCTTTCAgg                                                                                         >  1:509022/1‑143 (MQ=255)
                                                            gcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTt‑c                                                                                  >  2:150076/1‑143 (MQ=255)
                                                              tccaaCGCCGCATCCGGCCTACAAAACCATGAAAATTCAAGACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTt‑ctc                                                                                <  1:433872/140‑1 (MQ=37)
                                                              gTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCCGGGCGTt‑ctc                                                                                >  1:1035622/1‑143 (MQ=255)
                                                                gcactccTTATCCGGCCTACCACATCATGAACCCTCAATACATTTCAAGATTTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCtt                                                                              <  1:2597/138‑1 (MQ=37)
                                                                gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGAAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAACATCGCTATGCGCCGCTGGCAGCGCGTt‑cttgt                                                                              >  2:599819/1‑140 (MQ=21)
                                                                 aaCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTc                                                                             <  1:1036429/143‑1 (MQ=255)
                                                                  aCGCCTTATCCGGCCTACAGAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCa                                                                            <  2:557611/143‑1 (MQ=255)
                                                                  aCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCa                                                                            >  1:538721/1‑143 (MQ=255)
                                                                   cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCaa                                                                           <  1:461974/143‑1 (MQ=255)
                                                                   cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATGAAAGACCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCaa                                                                           >  2:528656/1‑143 (MQ=255)
                                                                   cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCGGATAAGCGTAGCGCAGCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCGTTCAGGGCGTT‑CTCTTCaa                                                                           >  1:292731/1‑143 (MQ=255)
                                                                     ccTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGCG‑CTCTTCAATa                                                                         >  2:93494/1‑143 (MQ=255)
                                                                       ttATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATaaa                                                                       <  1:832542/143‑1 (MQ=255)
                                                                       ttATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCCTTCAGGGCGTTACTC‑TCAATaaa                                                                       >  2:1062158/1‑143 (MQ=255)
                                                                         ggccGGCCTACGAAATCACGAAGATTCGATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACg                                                                     <  2:215444/141‑1 (MQ=38)
                                                                         aTCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACg                                                                     >  2:666158/1‑143 (MQ=255)
                                                                          tCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTGTTCAATAAAGGc                                                                    >  1:314882/1‑143 (MQ=255)
                                                                           ccGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGCGCGTT‑CGCTTCAATAAACGCa                                                                   >  1:392547/1‑143 (MQ=255)
                                                                              gCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCCCTTTCACGGCGTT‑CTATGCACTAAACGCACgg                                                                >  1:6849/1‑143 (MQ=37)
                                                                                     gaaTCATGAAAATTCAATACATTGCAAGATTTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGtt                                                         <  2:168212/142‑1 (MQ=255)
                                                                                         catcataaTTTAATACATGGGAAGTTGTTCGTAGGCCGTATACGCTGGGGGCATCAGGATCGTTCTTATGTTTAGCGCCATGAAATATCGATAGTCGCCGGTTTCAGTGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAAc                                                     <  2:652052/137‑1 (MQ=255)
                                                                                         cATGAAAATGCAATACAGTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAAc                                                     <  1:1002185/143‑1 (MQ=255)
                                                                                            gAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGc                                                  >  2:1089030/1‑143 (MQ=255)
                                                                                             aaaaTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTCGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCg                                                 >  1:1152860/1‑143 (MQ=255)
                                                                                                 ttCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAACCGCACGGCGCGGTTCAACGGCGTGGc                                             >  2:376505/1‑143 (MQ=255)
                                                                                                    aaTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCa                                          <  1:795850/143‑1 (MQ=255)
                                                                                                    aaTACATGGCAAGACTTTCGTAGGCCTGATACGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCa                                          <  2:521464/143‑1 (MQ=255)
                                                                                                      tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                                        >  1:1106832/1‑143 (MQ=255)
                                                                                                      tACATGGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                                        <  1:116073/143‑1 (MQ=255)
                                                                                                          ttGCAAGATTTGCGTAGCCCGGAGAAGCGTAGCGCATCGGGGGTGCTCGCACGCGTAGCTCCATGAAATATCGATATTCGCCGCTGTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCg                                    <  1:1191842/143‑1 (MQ=255)
                                                                                                           tGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAACCGCACGGCGCGGTTCAACTGCGTCGCCCATCAGCgg                                   >  1:320034/1‑142 (MQ=255)
                                                                                                            gCAAGATTTTCGTAGGCCTGATAGGCGTAGCGCATCAGGCACGCTCGAATGGTGAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtg                                  <  2:1040283/143‑1 (MQ=255)
                                                                                                            gCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CGCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtg                                  <  1:507766/143‑1 (MQ=255)
                                                                                                             catgATTGTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtgg                                 <  2:1138401/140‑1 (MQ=255)
                                                                                                              acgcttctCGTTGGCCTGATAGGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATACACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                                <  2:127982/136‑1 (MQ=255)
                                                                                                              aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                                <  1:760839/143‑1 (MQ=255)
                                                                                                              aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                                <  1:637001/143‑1 (MQ=255)
                                                                                                               agatcgtCGTAGGCCCGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggtg                               <  1:234740/137‑1 (MQ=255)
                                                                                                               aGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggtg                               <  1:413653/143‑1 (MQ=255)
                                                                                                                gATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGa                              >  2:357403/1‑143 (MQ=255)
                                                                                                                 actttGGTAGGCAGGATAAGCGAAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaa                             <  2:1011238/141‑1 (MQ=255)
                                                                                                                 aTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaa                             <  2:295276/143‑1 (MQ=255)
                                                                                                                    ttCGTAGGCCTGATGAGAGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGTCGTCGCCCATCAGCGTGGTGaacaa                          <  2:568283/143‑1 (MQ=255)
                                                                                                                    ttCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaa                          <  1:660636/143‑1 (MQ=255)
                                                                                                                       gTAGGCCTGATAAGCGTATCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTg                       <  1:531048/143‑1 (MQ=255)
                                                                                                                       gTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTg                       <  2:547435/143‑1 (MQ=255)
                                                                                                                        tAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTgg                      >  1:791190/1‑143 (MQ=255)
                                                                                                                         aGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGt                     <  1:38908/143‑1 (MQ=255)
                                                                                                                          agCCTGATAAGCGTAGCGCGTCGGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTc                    <  2:1010381/142‑1 (MQ=255)
                                                                                                                           gCCTGGTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCg                   <  2:882282/143‑1 (MQ=255)
                                                                                                                           gCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCg                   >  1:854383/1‑143 (MQ=255)
                                                                                                                              tGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTGGCTGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGGCGgca                >  1:1009331/1‑143 (MQ=255)
                                                                                                                              tGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGgca                <  2:995807/143‑1 (MQ=255)
                                                                                                                                    gCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATGCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATc          <  1:796572/143‑1 (MQ=255)
                                                                                                                                       tAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCa       >  1:984610/1‑143 (MQ=255)
                                                                                                                                         gcggATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCATc     <  2:750708/143‑1 (MQ=255)
                                                                                                                                          cgcATCAGGCACGCTCGCATGGTTAGCGCCATTAACTATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTGCAATGAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCCGCAATCGCATCt    >  1:403645/1‑143 (MQ=255)
                                                                                                                                          cgcATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAAGCCGTT‑CTCTTCACTAAACGCACGGCGCGGGTCAACGGCGTCGCCCATCAGCGGGGTGAACAAGTGGTCTGCAACAAACGCATca    >  1:359129/1‑142 (MQ=255)
                                                                                                                                           gcATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCATCtt   >  2:280748/1‑143 (MQ=255)
                                                                                                                                            cATCAGCCACGCTCGCATCGTTAGCGCCATTAAATATCGATATCCGCCGCTTTCAGGGCCCT‑CTCCTCTATTTCCGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCATCttt  <  1:614089/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                               
CAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTT‑CTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCATCTTT  >  NC_000913/3877536‑3877818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.