New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2791004 = | 55 (1.060) | 5 (0.100) | 5/270 | 6.6 | 8.5% | coding (1023/1269 nt) | lhgO | L‑2‑hydroxyglutarate oxidase |
? | NC_000913 | 2791022 = | 55 (1.110) | coding (1041/1269 nt) | lhgO | L‑2‑hydroxyglutarate oxidase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAGGTACA > NC_000913/2790882‑2791162 | gTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTCTCTGCGGCTGGTGCCAAAGTATTGTCCACGGCTTTCGTTAAGCGATCTCCAGCCCTGGCACGCCGGAGTGCGCGCGCa > 1:164836/1‑143 (MQ=255) gTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCa < 1:549269/143‑1 (MQ=255) tgcAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAGAAGTATTGTCCCCGGCTGCAGTTATGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCg > 1:652364/1‑143 (MQ=255) tgcAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCTCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCg > 1:941599/1‑143 (MQ=255) gcgagaCCATCTGCGCTCAGGGCTGGGCGTGATGAAAAACGCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCgg < 2:562379/138‑1 (MQ=255) gcAAAACCATCTACGCTCAGGCCTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCgg < 2:139967/143‑1 (MQ=255) gacacccATCTACGTTCGGGACTGGGCGAGATGAAAAACGCGCGGTGCAAAAGGGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTGTCGTTAAGCGATGTCAACCCGTGTGGCTCGGGTGTGCGGGCGCAGGCGGt < 2:117485/138‑1 (MQ=255) aaaCCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTAt > 1:749143/1‑143 (MQ=255) tACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGAc < 1:404296/143‑1 (MQ=255) cTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCa > 2:339981/1‑143 (MQ=255) cTGTGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGAt < 1:528296/143‑1 (MQ=255) gggCGAGATGTAAAACTCGCTGTGCAATAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTGAAGCGCTGTCCAGCGCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGAttc < 2:587310/143‑2 (MQ=255) tgCGTGATGGAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCTGCTTTCGTTCAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa < 2:728772/142‑1 (MQ=255) tgCGAGATGAGGACCTCGCTGGGCAAAGGCGGGTGTCTGCGGCTGGTGCAGAAGGATTGGCCCCGGCCTGCGTTACGCGCTCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa < 1:198779/142‑1 (MQ=255) ggCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa < 1:402490/143‑1 (MQ=255) ggCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa < 2:749143/143‑1 (MQ=255) cGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACg < 2:124949/143‑1 (MQ=255) gagcaaaaaCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGAtt < 1:169250/139‑1 (MQ=255) gAAAACCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTc < 1:296908/143‑1 (MQ=255) gAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTACGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCGGATGGACGATTTTc > 2:331357/1‑143 (MQ=255) gAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCCGGCGGTATCGCCGGACGGCCGGCTGCGTGACGGTTTTc > 2:438179/1‑143 (MQ=255) aaaatCTCGCGGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGAATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCt < 1:770865/143‑1 (MQ=255) aaaaCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCGGGCGGTATCGCCGGACGGCAAGCTGGTTGACGATGTTCTg > 1:575346/1‑143 (MQ=255) aaaaCGCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTg < 1:921848/143‑1 (MQ=255) gCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATCGTACCAGGCTTGCTTTGCGCGATCTCCGGCTCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTca < 1:178322/143‑1 (MQ=255) tgCAAATGCGGCTGTCTGGGGCTGGTGCAAAAGTATTGTCCCCGTCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTcaccac < 2:565745/143‑1 (MQ=255) tgCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTcaccac < 1:429953/143‑1 (MQ=255) cAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGAAGCTTTTCTGTTTGTAAcccccc > 2:54382/1‑143 (MQ=255) aaaaGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCGCCAcccc > 1:142357/1‑143 (MQ=255) aaaaGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCAcccc < 1:339981/143‑1 (MQ=255) cTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGCTCca > 2:844322/1‑143 (MQ=255) tGCGGCTGGTGCAAAAGTATCGTCCCGCGCTTTGTTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCGGGCTGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCcac < 2:151723/143‑1 (MQ=255) ggCGGCTGGGGCAAAAGTGTTGGCCCCGGGTTTCGTTAAGCGACCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCcac < 2:546115/142‑1 (MQ=255) tGCAACAGTATTCCCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt < 1:377444/143‑1 (MQ=255) tGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt > 2:262891/1‑143 (MQ=255) tGCAAAAGTATTGTCCCCGGCTGTCGTTAAGCGAGCTCCAGCCCTGGACGGACTCATTCCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt < 1:947993/143‑1 (MQ=255) cAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCCCGACCCCCACCTGCAATgc > 2:801668/1‑143 (MQ=255) cAAAAGCATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACAGCAAGCTGATTGACGATTTTATGTTTGTCACCACCCCGCGCACGATCCACACCTGCaagga > 1:109819/1‑140 (MQ=255) agaggaTTGGCCGCGTCTTGCGTTAGGCGATCTCCAGCCCGGGCGCGCCGGGGTGCGGGCGCTGGCGGTATCGCGGGGCGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGAGCCACACCTGCAATgcgc < 2:189803/138‑1 (MQ=255) aTTGTGCCCTGCTTTCGTTAAGCGTTCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGTGGTATCGCCTGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTcc < 2:462118/143‑1 (MQ=255) tggccccGGCTTTCGTTCAGCTATCTCTATCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTcccc < 1:805215/140‑1 (MQ=255) tGTCTCCGGTGTTCTTTAAGCTATCTGCTGTCCGGGCTCGTCTTGGTGTGGGCGCAGGCAGTATCGCCTGACGGCACGCTGATTGTCTATTTTTTGTTTGTTACGACCACGCGCGAGATCTACACCTGCAATGCGCCCTcccc < 2:864516/143‑1 (MQ=255) cccGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCa > 1:732009/1‑143 (MQ=255) ccGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAg > 2:138172/1‑143 (MQ=255) ccGGCTTTCGTTAAGCGATCTCCAGCCCTGCCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGGTGGTTTCCCCACCGCCCCCACCCCGCGCACGATCCACACCCGCAATCCGCCCTCCCCGGCac > 1:217975/1‑142 (MQ=255) cGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGc > 1:394964/1‑143 (MQ=255) cGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCCATGCCCCCTCCCCGGCAGCGACCTCAGCGATTc > 1:617125/1‑143 (MQ=255) cctcgcgCCCCGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGCCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTa < 2:913917/137‑1 (MQ=255) ctcCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGTCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTAt < 1:103707/143‑1 (MQ=255) ccgGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTc > 1:608227/1‑143 (MQ=255) ccgGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTc < 2:394964/143‑1 (MQ=255) cgGTGTGCGGGCGCAGGTTGTATCGCCGGACGGCAAGTTGATTGACGATTTTCTGTTGGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCa < 1:270869/143‑1 (MQ=255) gcgacgcgcgcAGCCTGTACCGCCGGACGGCACGCTGCTTGACGATTTTCTGCTTGTCACCACCCCGCGCACGATCCACACATGCCATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCa < 2:194926/136‑1 (MQ=255) gtgCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGGTTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCACCCCGGCGGCGACATCAGCAATTCCTAGTGGCGCGCATCTCGTCAGCaa > 1:539877/1‑143 (MQ=255) tgCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAg < 1:477030/143‑1 (MQ=255) tgCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAg < 1:831825/143‑1 (MQ=255) cGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACACCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCACCGACATCACCAATGCACATAGGGACGCACATTGTCAGCAAgga > 2:504622/1‑142 (MQ=255) gcgcAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAGGTACa > 2:31553/1‑143 (MQ=255) | GTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAGGTACA > NC_000913/2790882‑2791162 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |