Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016441 (0.030)33 (0.840) 30/284 0.3 97.1% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 1 (0.030)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

ACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001524‑4001787
                                                                                                                              |                                                                                                                                         
gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagaatacggtcgggtctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg                                                                                                                           >  1:300605‑M2/127‑143 (MQ=255)
 tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtggctttgcagacgacgccggcctgcagCTCCTTCTTCTCTTTtgc                                                                                                                          >  1:339286‑M2/126‑142 (MQ=255)
          acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa                                                                                                                 <  1:384355‑M2/27‑1 (MQ=255)
            gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg                                                                                                               >  1:632789‑M2/115‑143 (MQ=255)
             acgacgagcgccggcgcgtacaatctgaacttggccagagcctggcaccccgcccggaagtggaagacatcgaagcctcggcacgtttctttgaaggtgacggcggccaccagCTCCTTCTTCTTCTTTGAAGATGCGGAAGa                                                                                                              <  2:351238‑M2/30‑1 (MQ=255)
                   agcaactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc                                                                                                        <  1:389514‑M2/36‑1 (MQ=255)
                      gactgcgcgtacaatcttatcgtggccatagcctggcaatccgcccggtactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg                                                                                                     <  2:77842‑M2/39‑1 (MQ=255)
                           cgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatgggaaagtttctttgaagacgacgacggcctgcatTTCCTTCTTCTTCTTTGACGATGCGGAGGATCACGCCCGTAacg                                                                                                >  2:388523‑M2/100‑142 (MQ=255)
                              gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcaacggatcttttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTGCAAGTTGCGGAAGGTAACACCAGTAActcaa                                                                                             >  1:269072‑M2/97‑141 (MQ=255)
                                  aatccgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt                                                                                         <  1:424239‑M2/51‑1 (MQ=255)
                                      ttgacttgggcagagcctggcaacccgcccggaactgaaagacatcgaagcaccggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa                                                                                     <  2:110811‑M2/55‑1 (MQ=255)
                                      tgagctttgccagagcctcgcaaccctcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCCTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa                                                                                     <  2:716588‑M2/55‑1 (MQ=255)
                                          cttcgccagggcctggcaacccccccgttactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa                                                                                 <  2:21960‑M2/59‑1 (MQ=255)
                                                    gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa                                                                       <  1:424214‑M2/69‑1 (MQ=255)
                                                      gtggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg                                                                     <  1:71883‑M2/71‑1 (MQ=255)
                                                              ccgcccggaactggaagacatcgaatcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGGAACTCCACTGTGGCATTTACCGTCCGTGCTGCTCGGCTg                                                             >  1:648614‑M2/65‑143 (MQ=255)
                                                                gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                           <  2:145898‑M2/81‑1 (MQ=255)
                                                                 cccggaactggaagacatctaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGttt                                                          <  1:549512‑M2/82‑1 (MQ=255)
                                                                   cttgAAGACATCTAAGCATCGGCACGTTTTTTTTTAGTTTACGTCGTCCTGCAT‑‑‑‑‑CTCCCGCTTCGACTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc                                                   <  1:178527/140‑1 (MQ=255)
                                                                      aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCGCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct                                                     >  1:63121‑M2/57‑143 (MQ=255)
                                                                            gagacgtcgccgcgtccgcacgtttctttgaacacgaccacggcctgcatCTGCTTCCTCTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCTTGATGGTCGTCTGTTTACTCTgcgtga                                               <  2:152266‑M2/93‑1 (MQ=255)
                                                                             agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag                                              >  1:448450‑M2/50‑143 (MQ=255)
                                                                                  tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGGGGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgggcgtga                                         >  1:99915‑M2/45‑143 (MQ=255)
                                                                                       gcttcggtacttttctttgaagacgacgacggcctgcatCTCCTGCTGCGTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc                                    <  1:203682‑M2/104‑1 (MQ=255)
                                                                                            ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCt                               >  1:367062‑M2/35‑143 (MQ=255)
                                                                                                cgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc                           <  1:634092‑M2/113‑1 (MQ=255)
                                                                                                 gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTTCGCGTGTACTGCCCGCTTTTCg                          >  1:613333‑M2/30‑143 (MQ=255)
                                                                                                   ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc                        <  1:504786‑M2/116‑1 (MQ=255)
                                                                                                    tctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCTGCTTTTGGTCt                       >  2:205981‑M2/27‑143 (MQ=255)
                                                                                                          aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGCCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCGTTTcggctgcacac                 >  2:378601‑M2/21‑138 (MQ=255)
                                                                                                                  gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGCGCGTGTACTGCCCGCTTTTCTTCTGTATCGTATGCGTg         >  1:88822‑M2/13‑143 (MQ=255)
                                                                                                                  gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTg         >  2:526254‑M2/13‑143 (MQ=255)
                                                                                                                     ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc      >  1:356542‑M2/10‑143 (MQ=255)
                                                                                                                         cgcagCTCCTTCCTGTTCTGTGGGGGTGCGGAAGCTCACGCCGGCAACTCCACGGTGGCATTTACCCTCCGTGGTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAg  <  2:99915‑M2/138‑1 (MQ=255)
                                                                                                                              |                                                                                                                                         
ACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001524‑4001787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.