New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780510 (0.170)36 (0.700) 27/250 1.2 75.9% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 14 (0.270)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207663‑1207946
                                                                                                                                              |                                                                                                                                             
cattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                                                                               >  1:893943‑M1/128‑143 (MQ=255)
 gTGCGAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGGAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                              <  2:22278/143‑1 (MQ=255)
    cccgcccGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                           <  2:1005191‑M1/140‑5 (MQ=255)
    ccAGCCTGGCGAAGGGGCGGCACGACCAGTTACTTACCGCGCTTCGCGCGCCGATGTTAAGCCGCGAGAATCCGTTTGGCGATATCGAATCGGATGGCACTGCGCACGCGCCTCTCGACAACCGAGGGATGGGGGAAggcgga                                                                                                                                           >  2:184963/1‑139 (MQ=17)
    ccAGCCTGGAGACGGGGCGGCACTACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCTGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                           <  1:422525‑M1/143‑5 (MQ=255)
      aGCCTGGGGGAGGGGCGGCACGACCAGGTACTTACCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                         <  2:300003‑M1/143‑7 (MQ=255)
      aGCCTGGAGAAGGGGCGGCACGACCAGTTACGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGACTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                         <  1:368336‑M1/143‑7 (MQ=255)
      aGCCGGGAGAAGGGGCGGCACGAGCCGTTACGTACCGCACTTCGCACGCGGCGGTTAAGCCGCAAGAATCCGGTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                         <  2:674054/143‑1 (MQ=18)
       ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaagccccctgggaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                        >  1:905663‑M1/121‑143 (MQ=255)
       gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAGCCTGGGTTTGGGAGAAGGcggcgga                                                                                                                                        >  2:1062066‑M1/1‑136 (MQ=255)
        ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                                       >  1:662092‑M1/1‑135 (MQ=255)
        ccTGGACAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                                       <  1:175251‑M1/143‑9 (MQ=255)
         gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                      >  1:306450‑M1/119‑143 (MQ=255)
          tagatctgtgttctggtcatttgttgatgcgcgtacatagccaataagcatgttaaatccccctggtaggagccggaatgatgccctttgcttgttatttcttcattttcatatacgGTGGTTTGGGGGGAGGAGCAAaacac                                                                                                                                     <  2:431138‑M1/26‑3 (MQ=255)
          tagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                                                                     <  2:385928‑M1/26‑1 (MQ=255)
          tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAACTCGGACCGCACTGCGCAAACGGCTCTAGAGTAGTACAGGTTGGGAGACGCAGCAAAACTc                                                                                                                                     >  2:1024285/1‑143 (MQ=17)
          tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                     >  1:778147‑M1/1‑133 (MQ=255)
           ggAGAAGGGGCGGAACGACCAGCTACTGACCGCACTGCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                                    <  1:523424‑M1/143‑12 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatcgccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  1:5819‑M1/116‑143 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  1:1024579‑M1/116‑143 (MQ=255)
            gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                   >  1:1031545‑M1/116‑143 (MQ=255)
              tctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGGAGGAGCAAAACTCAATg                                                                                                                                 <  1:320184‑M1/30‑1 (MQ=255)
               ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGGAGGAGCAAAACTCAATgc                                                                                                                                <  1:62560‑M1/31‑1 (MQ=255)
                tgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                               <  1:758337‑M1/32‑1 (MQ=255)
                 ggggCGGCATGTCCGGTTAGGTACCGCACGGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  2:308440‑M1/143‑18 (MQ=255)
                 ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  2:817368‑M1/143‑18 (MQ=255)
                 ggggCGGCACGACCAGTGACTTACCGCATGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  1:770702‑M1/143‑18 (MQ=255)
                 ggggCGCCACGACCCGTTACTTACCTCGCGTCCCGGGCGGCGTCTATGCCGCAAGAATCCGTTTGGCGTTATCAAATCGGATGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                              <  2:974691‑M1/143‑18 (MQ=255)
                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgctggtg                                                                                                                           >  2:827879‑M1/1‑123 (MQ=255)
                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                           >  1:591146/1‑143 (MQ=255)
                      ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGAAACg                                                                                                                         >  1:716020/1‑143 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAACTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                                        >  1:756967‑M1/1‑120 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAACACCTCGGTCTGGGAGAAGGccctgcattccacgttggagccc                                                                                                                        >  2:714109‑M1/1‑120 (MQ=255)
                        cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                       <  2:1025780‑M1/143‑25 (MQ=255)
                         aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTCTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                      <  1:826269‑M1/143‑26 (MQ=255)
                          cGACCAGTTACTTGCCGCTCTTCGCGCGGTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                                     <  2:29646‑M1/143‑27 (MQ=255)
                                gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               >  1:790871‑M1/96‑143 (MQ=255)
                                gTTACTTACCGCACTTCGCGCGCTGCTGTTGCGCCGCGTGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               <  2:220277/143‑1 (MQ=255)
                                        gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTCGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                       <  2:233490‑M1/56‑1 (MQ=255)
                                        ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                       <  2:1037478‑M1/143‑41 (MQ=255)
                                        ccGCACTCCGCGCGCTGGTGTTAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                       <  2:175973‑M1/143‑41 (MQ=255)
                                         cGCCCTGCGCGGGCTGGGCTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccctcag                                                                                                      <  2:761941‑M1/143‑42 (MQ=255)
                                          gCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                     <  1:295727‑M1/143‑43 (MQ=255)
                                                 gccgataagcatgtgaaatcccgctgggaaaagcaggagtgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                              >  2:483994‑M1/79‑143 (MQ=255)
                                                    actcagcatgttacatcaccctggtaaaagcaggaatgaggtcatttgcttgttatttgtgcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                                                                           >  2:386246‑M1/76‑143 (MQ=255)
                                                     ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                                                                          <  1:402547‑M1/69‑1 (MQ=255)
                                                          catgttaaatccccctggtaaaagcaggaatgatgcaatttgcttgttatttcttcatgttcataaaggTTGGTGGGGGAGAAGGAGCAAAACTCAATGCGGCAACGGGTACGTTAGGACGCGCGGGGTGCATAGCTATACCg                                                                                     <  1:689718‑M1/74‑1 (MQ=255)
                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                                    <  1:92978‑M1/143‑60 (MQ=255)
                                                           gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                                    >  1:834098‑M1/1‑84 (MQ=255)
                                                             tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTTCATTTGGACGCACCGGTTTCATAGTTATACCGGtt                                                                                  >  1:339710/1‑143 (MQ=255)
                                                             gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                  <  2:270321‑M1/77‑1 (MQ=255)
                                                             gtgaaacccccattgtaaacgcaggaatgatgtcattttcttgttatttctttattttcataaacgTTGGTTTTGGAGAAGGAGCAACACTCAATGCAGCAACGGCTTCATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                  >  2:508661‑M1/67‑143 (MQ=255)
                                                              ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACACAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCCTAGCTATACCCGTTa                                                                                 <  1:81587‑M1/78‑1 (MQ=255)
                                                               aGCCGCACGAACCCGTGTGGCGATCTGAACGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCCTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                                <  2:794369/143‑1 (MQ=255)
                                                                  cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttccgccactccgccaacaggccggctgaa                                                                             >  2:847736‑M1/1‑77 (MQ=255)
                                                                      ccctggtaaaagcaggaatgatgtcatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         >  1:51224‑M1/58‑143 (MQ=255)
                                                                      ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCCCGGCTCCTCAATCACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         >  1:1011427‑M1/58‑143 (MQ=255)
                                                                           gtagtagcaggaatgatgtcatttgcgtgttatttcttcatcttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTATGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                    >  2:369426‑M1/53‑143 (MQ=255)
                                                                           gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCCAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATCCCGGTTATGATTGGTGGTAt                                                                    <  2:685550‑M1/91‑1 (MQ=255)
                                                                              aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                 >  2:676667‑M1/50‑143 (MQ=255)
                                                                                    gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcaagctgtaactgaatggtgcggcctt                                                           >  2:504913‑M1/1‑59 (MQ=255)
                                                                                       gcgatcccttttgctggttatttcttcttttgcctaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                        >  1:431138‑M1/41‑143 (MQ=255)
                                                                                          atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAGTAGGACGCACAGGTTTCATAGCTATACCGTGTATGATTGATGGTATTGAGCAATGAGTAAt                                                     <  2:823459‑M1/106‑1 (MQ=255)
                                                                                             tCGGATGGCCCTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga                                                  <  1:482794‑M1/143‑94 (MQ=255)
                                                                                              cggcgggcactgTGCCAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcgttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcgggctgaaatgcaatggtgcggctttttctgctgaa                                                 <  2:897051‑M1/138‑95 (MQ=255)
                                                                                              catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                 >  1:61421‑M1/34‑143 (MQ=255)
                                                                                              cGGAGGGCACTGTCGAGACGGCTGTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                 <  2:104732‑M1/143‑95 (MQ=255)
                                                                                                tttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACAGCCACATTAGGACGCACCGGTTTCATACCTATCCCGGATATGATTGGTGGTATTGGGCGATCAGTAATCATtct                                               <  2:319780‑M1/112‑2 (MQ=255)
                                                                                                 aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                              >  2:1017757‑M1/1‑46 (MQ=255)
                                                                                                   gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                            >  1:884031‑M1/29‑143 (MQ=255)
                                                                                                      tgttatttcttcatttgcataaaccTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTAAATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTAGGGGTATTGAGCAATCAGTAATCATTCAGTgggg                                         >  2:129311‑M1/26‑143 (MQ=255)
                                                                                                      aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGCGGTATTGAGCAACCAGTAATCATTCAGTgggg                                         >  1:997387/1‑143 (MQ=255)
                                                                                                         tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                                      >  1:636539‑M1/23‑143 (MQ=255)
                                                                                                             aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                  >  1:625521‑M1/1‑34 (MQ=255)
                                                                                                               ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                >  1:270321‑M1/17‑143 (MQ=255)
                                                                                                               ttcattgtcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                >  1:534005‑M1/17‑143 (MQ=255)
                                                                                                                  attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACAGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                             <  2:817290‑M1/130‑1 (MQ=255)
                                                                                                                    tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcgaggg                           >  1:205735‑M1/1‑27 (MQ=255)
                                                                                                                    tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                           >  1:284090‑M1/1‑27 (MQ=255)
                                                                                                                             cgTTGGTTTGGCGGAAGGAGCAAAACTTAATGCAGCAACTGCTACATTAGGACGCACCGGTTTCATGGCTATATCGGTTATGATTGGTGGTATTGAACATTTATTCTTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTg                  >  2:758337‑M1/3‑143 (MQ=255)
                                                                                                                             ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                  <  2:284090‑M1/143‑126 (MQ=255)
                                                                                                                              cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctggagaatacccggaactggcaaaggcttatccggc                 >  1:626219‑M1/1‑17 (MQ=255)
                                                                                                                                tGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaa               >  1:57673‑M1/1‑15 (MQ=255)
                                                                                                                                   taTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTAAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg            <  1:352763‑M1/141‑1 (MQ=255)
                                                                                                                                   TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg            <  1:443700‑M1/143‑1 (MQ=255)
                                                                                                                                      gggTGAAGGctcggcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaat         <  2:263542‑M1/143‑135 (MQ=255)
                                                                                                                                       ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaatt        <  1:949926‑M1/143‑136 (MQ=255)
                                                                                                                                        GAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg       <  2:1003314‑M1/143‑1 (MQ=255)
                                                                                                                                         AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg      <  1:440403‑M1/143‑1 (MQ=255)
                                                                                                                                         AGAAAGAGCAGTACTCAATGCAGCAGCGGCTACATTAGGACGCACCGGTTTCATGTCTATACTGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg      >  2:351167‑M1/1‑143 (MQ=255)
                                                                                                                                           aatgAGCAAAACTCAATGCGGCACCGGTTCCATGAGGACGCACCGGTTTCATAGCTATACCGGTGATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt    <  1:891931/140‑1 (MQ=255)
                                                                                                                                             ggctctgcattacctgttggtgtcccgggtccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga  <  1:162459‑M1/143‑142 (MQ=255)
                                                                                                                                             GGAGCAAATGTCGATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTTTACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTATGGGGGGTATgg  >  2:991275‑M1/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207663‑1207946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.