BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3892358 =	110 (1.880)	5 (0.090)	5/270	7.6	4.6%	coding (744/1176 nt)	mdtL	multidrug efflux system protein
*	?	NC_000913	3892392 =	102 (1.820)	5 (0.090)	5/270	7.6	4.6%	coding (778/1176 nt)	mdtL	multidrug efflux system protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 110 total aligned reads displayed.

TCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTTCTCGG  >  NC_000913/3892252‑3892533

tCAGCGTTTCGGTGATCCTCACTTTCGTCGACGCGCCACCAGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCAttt                                                                                                                                             <  1:195408/143‑1 (MQ=255)

tCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGCGCGCGGTGAATACGCCACCATTATGGCGGTGACCGCTGGCGGCAGCATGACCGTGTCATTCGCCACGCCAttg                                                                                                                                             >  2:737646/1‑142 (MQ=255)

tCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGGATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCGTGACCGTTTCATTGTCCACGGCAgtt                                                                                                                                             >  1:861365/1‑143 (MQ=255)

 cAGTGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTAGTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTg                                                                                                                                            <  1:233348/143‑1 (MQ=255)

  aGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTgc                                                                                                                                           <  1:827298/143‑1 (MQ=255)

     gTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCt                                                                                                                                        <  1:129116/143‑1 (MQ=255)

      tttCGGTGCTCCTCCCTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTg                                                                                                                                       <  1:235267/143‑1 (MQ=255)

      tttCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTg                                                                                                                                       >  2:28400/1‑143 (MQ=255)

      tttCGGTGATCCTCACTTTCGTCAACACGACACCGGTATTGCTGATGGAAATCAGGGGGTTTGAGCGCGGTGAATACGCCACCAGTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATACTCCACGCCCTTTgcgccg                                                                                                                                       >  1:473/1‑141 (MQ=255)

      ttgcGGTGATCCTCACGTTCGTCAACACGTCACCGGTATTGCTGATGGAAAGCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTg                                                                                                                                       <  2:120976/140‑1 (MQ=255)

       ttCGGTGATCCTCACTTCCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTgg                                                                                                                                      <  2:162334/143‑1 (MQ=255)

          ggTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGGCATATGCGCTgggca                                                                                                                                   >  2:8643/1‑141 (MQ=255)

           ttGAGCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAAt                                                                                                                                  <  2:300578/142‑1 (MQ=255)

           gTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATGCTCCACGCCATTTGCCCTGGGCAt                                                                                                                                  >  1:627888/1‑143 (MQ=255)

            tggtCCTCACTTTCGGCGACGCGTCCCCGGTAGTGCTGATGGAAAGCAGGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAAtt                                                                                                                                 <  2:517625/140‑1 (MQ=255)

            gcgtCCTCACTTTCGTCGACACGTCACCGGTATTGCGGATGGAAATCATGGGGTTTGAGCGCGGTGAAGACGCCACCATTATGGCGCCGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAAtt                                                                                                                                 <  2:607044/140‑1 (MQ=255)

             gATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTCTCATTCTCCACGCCATTTGCGCTGGGAAttt                                                                                                                                >  2:53486/1‑143 (MQ=255)

             gATCCTCACTGGCGGCAAGACGTGAGCGGTATTGCTGATGGAAGTCATGGGGTTTGCGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAAttt                                                                                                                                <  2:983797/143‑1 (MQ=255)

               tCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTTACGGCTGGCGCCGGCATGACCGTTTCATTCTCAACGCCATTTGGGCTGGGACttttt                                                                                                                              >  2:186946/1‑143 (MQ=255)

                ccTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTa                                                                                                                             >  1:302155/1‑143 (MQ=255)

                ccTCACTTTCGTCAACACGTCACCGGTACTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAACACGCCACCATGAGGGCGCGGACCGCTGGCGTCAGCATGACCGTCTCATTCTCCACGCCATTTGCGCTGGGAATTTTTa                                                                                                                             <  1:521215/143‑1 (MQ=255)

                 cTCACTTTCGTCAACCCGTCACCGGTATTGCTGATGGAAATCATGGGGTGTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTaa                                                                                                                            <  2:47042/143‑1 (MQ=255)

                 cTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTaa                                                                                                                            <  1:808875/143‑1 (MQ=255)

                  tCACTTTCGTCAACACGGCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAg                                                                                                                           <  2:165845/143‑1 (MQ=255)

                   cACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCACCATGACCGTTTCATTCTCCACGCCATGTGCGCTGGGAACTTTTACGc                                                                                                                          >  2:84867/1‑143 (MQ=255)

                     cTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATAATGCGATTCCAGCATGGGGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACAGTTTCATTATCCACGCCGTTTGAGCTGGGAATCTTTAAGcac                                                                                                                        >  2:228506/1‑141 (MQ=255)

                         cGTCAGCACGGGCCCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGACTACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCacgta                                                                                                                    <  2:623879/143‑1 (MQ=255)

                          gTCAACACGTCACCGGTATTGCTGATGGGAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCGCCACGCCAATTGCGCTGGGACTGTGTAAGCCaccaac                                                                                                                   >  1:937285/1‑139 (MQ=255)

                             aaCACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGtt                                                                                                                <  1:258875/143‑1 (MQ=255)

                                  gTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCAGCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTGCACGCCCTTTGCGCTGGGAATTTTTAAGACACGTACGTtgctga                                                                                                           >  2:352494/1‑143 (MQ=255)

                                   tCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTgatgat                                                                                                          >  1:149693/1‑143 (MQ=255)

                                   tCACCGGGATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGCCCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTgatgat                                                                                                          <  1:415712/143‑1 (MQ=255)

                                         gTAGTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGCATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCCTGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTc                                                                                                    <  2:498528/143‑1 (MQ=255)

                                               ctgagcgAAAGCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGgt                                                                                              <  2:363061/137‑1 (MQ=255)

                                               cTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAGTTTTTAAGCCACGTACGTTGATGATCACCTCGCAGgt                                                                                              >  1:885615/1‑143 (MQ=255)

                                               cTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTGTTAAGCCACGTACGTTGGTGATCACCTCGCAGgt                                                                                              >  2:357611/1‑143 (MQ=255)

                                                  aTGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGtt                                                                                           >  1:709520/1‑143 (MQ=255)

                                                       aaTCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGCCCGTTTCATTCTCCACGGCCTTTGCGCCAGGAATTCGTAAGACACCTTCTGTGATGATCACCTCGCAGCTGTTAttac                                                                                      >  2:797049/1‑141 (MQ=255)

                                                       aaTCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTcc                                                                                      >  2:966022/1‑143 (MQ=255)

                                                        aTCATGGGGTTGGAGCGCGGTGAAGACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCGCGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCt                                                                                     <  2:379206/143‑1 (MQ=255)

                                                          cATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTgg                                                                                   <  1:747238/143‑1 (MQ=255)

                                                           aTGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTggc                                                                                  >  1:811105/1‑143 (MQ=255)

                                                           aTGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTggc                                                                                  >  2:968832/1‑143 (MQ=255)

                                                            tGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTggcg                                                                                 >  1:998242/1‑143 (MQ=255)

                                                              gggTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTggcggc                                                                               >  1:142324/1‑143 (MQ=255)

                                                               ggTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGgcggcg                                                                              >  2:691831/1‑143 (MQ=255)

                                                               ggTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGgcggcg                                                                              >  1:66539/1‑143 (MQ=255)

                                                                gTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGcggcgg                                                                             <  1:893870/143‑1 (MQ=255)

                                                                gTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGcggcgg                                                                             >  1:47428/1‑143 (MQ=255)

                                                                  ttGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCgggg                                                                           <  1:156620/143‑1 (MQ=255)

                                                                   tGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGa                                                                          >  1:589212/1‑143 (MQ=255)

                                                                    gAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCCTTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGAt                                                                         >  2:956692/1‑143 (MQ=255)

                                                                         cgcggAATGCGCCGACATTAGGGCGCTGACCGCTGGCGTCGGCATGACCGGCTCATCTTCCACGCCGGTTTCGCTGGTAATTTTTAAGCCGCGGACGTGGATGCGCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCCctc                                                                    <  2:657113/139‑1 (MQ=255)

                                                                         cgGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCActc                                                                    <  1:934194/143‑1 (MQ=255)

                                                                          tgggAATACGCCACCACTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTGGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCActct                                                                   <  1:55125/140‑1 (MQ=255)

                                                                          ggTGAATACGCCACCATTATGGCGCTGACCGCTGCCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCActct                                                                   <  1:58296/143‑1 (MQ=255)

                                                                            tGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTg                                                                 <  1:316691/143‑1 (MQ=255)

                                                                            tGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTAAGCACGGCGGCGGGGAACACTCTTg                                                                 >  2:14195/1‑143 (MQ=255)

                                                                                 aCGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCCCGCCATTTGCGCTGGGAATTTTTAAGCCACGTCCGTTGATGATCACCTCCCACGTGTTATTCATGCCGGCCGGGGTCACCCTTcccact                                                            >  2:720609/1‑140 (MQ=255)

                                                                                   gCCACCATTGTGGCGCTGCCCGCTGGCGTCAGCAGTTCCGTCTCGTTGTCCCCGCCATGTGCTCTGGTGATTTTTAAGCCACGTACGTTGTTGATTGCCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTc                                                          <  2:1001449/143‑1 (MQ=255)

                                                                                   gCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTc                                                          <  2:142324/143‑1 (MQ=255)

                                                                                    ccaccaTTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCa                                                         <  1:83346/143‑1 (MQ=255)

                                                                                     cagcaTTATGGCGCGGACCGCTGGCGGCAGCATGTCTGTTTCCTTCTCCCGGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCAc                                                        <  2:750773/140‑1 (MQ=255)

                                                                                     cacccTTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTGTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCAc                                                        <  2:28718/143‑1 (MQ=255)

                                                                                     caccaTTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCAc                                                        >  2:932502/1‑143 (MQ=255)

                                                                                     caccaTTACGGCCCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTGTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCAc                                                        <  1:886952/143‑1 (MQ=255)

                                                                                         agcagggCGCTGACCGCTGTCGTCAGCATGACCGTTTCCTGCGCCTCGCCATTTGCGCTGGGAATTTTTAAGCCACGGACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTc                                                    <  2:315982/138‑1 (MQ=255)

                                                                                          ttttGGCGCTGACCGCTGTCGTCAGCATGACCGTGTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTcc                                                   <  1:302363/140‑1 (MQ=255)

                                                                                             tGGCGCTGACCGCTGGCGTCAGCATGCCCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCAt                                                >  1:177178/1‑143 (MQ=255)

                                                                                             tGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCAt                                                >  1:401364/1‑143 (MQ=255)

                                                                                               gcgcTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGc                                              >  1:624821/1‑143 (MQ=255)

                                                                                                 gcTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTACGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACCCTTGCCGTTTCCCCTCCCCATGCgg                                            >  2:166257/1‑143 (MQ=255)

                                                                                                 gcTGACCGCCGGTGTCAGCCTGCCCGTTTCACTCTCCATGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCgg                                            <  1:114217/143‑1 (MQ=255)

                                                                                                    tgtcgtgggCTTCAGTATGCCTGTTTCATTCTCTCCGCCATTTGCGCTGGGAATTTTTAAGCCACGTAGGTTGATGATCACCTCGCAGGTGTTATTCCGGGCGGTGGTGATCACTCTTGCCGTTTCACCTGCCAATGCGGttt                                         <  2:708128/136‑1 (MQ=255)

                                                                                                    tcccGCTGGCGTCCGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGTGATCACTCTTGCCGTTTCACCTTCCCATGCGGttt                                         <  2:574658/141‑1 (MQ=255)

                                                                                                    gACCGCTGGCGTCAGCTTGTCCGTTTCATTCTCCACTCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGTTCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGttt                                         <  2:156269/143‑1 (MQ=255)

                                                                                                      ccGCGGGCGTCAGCATGACCGTTTCATTCTCCACGCCAGTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTtct                                       <  1:1008377/143‑1 (MQ=255)

                                                                                                        gCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTctct                                     <  1:53486/143‑1 (MQ=255)

                                                                                                           ggCGTGAGCATGACCGTTGCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCTCGTAGGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGtt                                  <  2:373327/143‑1 (MQ=255)

                                                                                                            gCGTCAGCATGGCCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGttt                                 <  2:875839/143‑1 (MQ=255)

                                                                                                            gCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGttt                                 <  2:1018480/143‑1 (MQ=255)

                                                                                                              gTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCGGTTTCACCTTCCCATGCGGTTTCTCTGTTTgg                               >  2:542152/1‑143 (MQ=255)

                                                                                                               tCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGt                              <  1:932502/143‑1 (MQ=255)

                                                                                                               tCAGCATGACCGTTTCATTCTCCACGCCAATTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCCGCGGGGATCACTCATGCCGTTTCACATTCCCATGCGGTTTCACTGTTTGGt                              >  1:430414/1‑143 (MQ=255)

                                                                                                                  ggaTGTCCGTCTCTTTCTCCACGGCATTGGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATc                           <  2:294314/141‑1 (MQ=255)

                                                                                                                      gACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTGTCTCTGTTTGGTCTCACGc                       >  1:212893/1‑143 (MQ=255)

                                                                                                                         cGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTTTTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCCCGCTGa                    >  1:399321/1‑143 (MQ=255)

                                                                                                                            cgagctctcCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGAttt                 <  1:747385/138‑1 (MQ=255)

                                                                                                                                atgctgaCGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTgcgc             <  1:527447/137‑1 (MQ=255)

                                                                                                                                   tcCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGCTTTCTCTGTTTCGTATCACGCTGCTTTGTGCTgg          >  1:136939/1‑143 (MQ=255)

                                                                                                                                   tcCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGGTTCACCTTCCCATGCGTTTTCTTTGTTTGGTATCACGCTGGttttagatcg          >  2:747385/1‑136 (MQ=255)

                                                                                                                                   tcCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCCGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCgg          >  2:531845/1‑143 (MQ=255)

                                                                                                                                    ccACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATCTCCGCCGGt         >  2:71369/1‑143 (MQ=255)

                                                                                                                                      aCGCCCTTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATAACTATTGGCGTTTAAATTTCCCATGCGGTTCATCTGTTTGGTATTACGCTGATTTGCGACGGtgt       >  2:884286/1‑141 (MQ=255)

                                                                                                                                      aCGCCATTTGCGCTGGGAATTTCTAAGCCACGCACGTCGATGATCACCTCGCCGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGttt       <  1:286391/143‑1 (MQ=255)

                                                                                                                                        ggcATTTGATCTGGGAATTTGCAAGCCGCGTCCGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGGGGGGATCACTCTTGCCGTTGCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTtct     <  2:238771/141‑1 (MQ=255)

                                                                                                                                        gCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTtct     >  1:155295/1‑143 (MQ=255)

                                                                                                                                        gCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTtct     <  1:28400/143‑1 (MQ=255)

                                                                                                                                           aTTTGCGCTGGGAATCTTTACGCCACGTACTGTAAAAAAAAGCGCTCATGTGTTATTCCTGGCGGCGGGGATCACTCTGGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTTCTCgg  <  1:1050769/143‑1 (MQ=255)

                                                                                                                                           aTTTGCGCGGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGCTTTGCGCCGGTTTCTCgg  >  2:709849/1‑143 (MQ=255)

TCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTTCTCGG  >  NC_000913/3892252‑3892533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.