Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)53 (0.910) 41/282 0.4 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 0 (0.000)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)85 (1.460) 51/280 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 121 total aligned reads displayed.

ATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526311‑3526591
                                                                                                                                           |                                                                                                                                              
ggatgccgcctgaaagggcgaagaaacggtcaaaagaggctgattcagggcatttacgggagaaaaaatcggctccaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCtaa                                                                                                                                             <  2:447081‑M2/4‑1 (MQ=255)
       cTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtg                                                                                                                                     >  1:149667‑M2/1‑135 (MQ=255)
           atcgggtctGCGATGATCGTGGTGTACTGTGATGTGCTTAATGAGCCGCAAGTTAAACGCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaa                                                                                                                                 >  2:297272‑M2/4‑131 (MQ=255)
              ctggcgaagaaacggcctaaataggctgagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                               <  1:597999‑M2/18‑1 (MQ=255)
              atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                               <  2:282634‑M2/18‑1 (MQ=255)
               tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAg                                                                                                                              >  2:16779‑M2/125‑143 (MQ=255)
                gTTTGCTACGATCAGCGGTTACTGTGATCTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagt                                                                                                                            >  2:778817‑M2/1‑126 (MQ=255)
                  cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacacgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCAGTAAGATGGGGTAAGCAt                                                                                                                           >  2:851781‑M2/122‑143 (MQ=255)
                   gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcgccttccCTAAGTCAGGTGGGGAAAGCATg                                                                                                                          >  1:992806‑M2/121‑143 (MQ=255)
                    gCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccct                                                                                                                        >  2:23849‑M2/1‑122 (MQ=255)
                       aTGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgat                                                                                                                     <  2:707337‑M2/143‑25 (MQ=255)
                         gATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtcgctgatat                                                                                                                   <  1:699928‑M2/143‑27 (MQ=255)
                           tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACCGACCACGACTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 <  1:362631‑M2/143‑29 (MQ=255)
                           ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCAt                                                                                                                  >  2:70019‑M2/113‑143 (MQ=255)
                           gcggcggTTACTGTGATGTGCTTAATGTTGCTCAAGTTTGACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTTACAGACTAAggaaggtgcgtacaagtccctgatatga                                                                                                                 >  2:658666‑M2/4‑115 (MQ=255)
                            gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCTAAGTACGCTGGGGAAAGGCTGtgcacacgt                                                                                                                 >  2:786333‑M2/112‑139 (MQ=255)
                              gCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtctctgataagagac                                                                                                              <  2:967494‑M2/143‑32 (MQ=255)
                               taaataggctgattcaaggcatttacgggagaaaaaatcgtctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgtg                                                                                                              <  1:593879‑M2/35‑1 (MQ=255)
                               taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaattaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATAGGGAAAGCATGAGCACCAAtgtg                                                                                                              >  2:530089‑M2/109‑143 (MQ=255)
                                aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGa                                                                                                             >  2:70372‑M2/108‑143 (MQ=255)
                                      gctgattcaaggcatttacgggagaaaagatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAtttttt                                                                                                       <  1:170821‑M2/42‑1 (MQ=255)
                                       tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                      <  1:764802‑M2/143‑40 (MQ=255)
                                        tgattcaaggcatttacgggtgaagagatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                     <  2:415477‑M2/44‑1 (MQ=255)
                                        tgattcaaggcatctacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                     <  1:455400‑M2/44‑1 (MQ=255)
                                        gtgATGTGCTTAATGGTGCTCAGGTTAAGGCCCACTCGTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                     <  2:1041744‑M2/143‑41 (MQ=255)
                                        gtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                     >  2:824990‑M2/1‑103 (MQ=255)
                                           ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgct                                                                                                  >  1:571983‑M2/97‑143 (MQ=255)
                                           ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaatcagccgagaagaatttccccgcttattcgcacgttccTAAAGTAAGATAGGGAGAGCATGAGCACCATAGGGGTTTTTTCAgct                                                                                                  >  2:509914‑M2/97‑143 (MQ=255)
                                            tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgatatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctg                                                                                                 <  2:750768‑M2/48‑1 (MQ=255)
                                            tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctg                                                                                                 <  1:277222‑M2/48‑1 (MQ=255)
                                              tgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCCGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGGCAGACTACggaaggtgcgaacaagtccctgatatgggatcatgtctgtcagctg                                                                                               <  1:16797‑M2/143‑47 (MQ=255)
                                              aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgctgct                                                                                               <  1:475319‑M2/50‑1 (MQ=255)
                                               aggaatttacgggagaaaaaaccggtccaaacacgaagaaatgtaatgcctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCtt                                                                                              <  2:477408‑M2/51‑1 (MQ=255)
                                                cTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGGCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagctcatgtttgtcctctgga                                                                                             <  2:514518‑M2/143‑49 (MQ=255)
                                                cTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                             <  1:137533‑M2/143‑49 (MQ=255)
                                                cTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTAATGTGTCCGGTGCGACTGACCACGCCTGACAGCCTAAggaaggtgcgaacaagtccctgatatgagataatgtttgtgatccgga                                                                                             <  1:9691‑M2/143‑49 (MQ=255)
                                                 gcatttacgggaggaaaaatcggctcaaacgtgcagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTg                                                                                            <  2:349228‑M2/53‑1 (MQ=255)
                                                    tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTg                                                                                         <  1:70372‑M2/56‑1 (MQ=255)
                                                             tagCTAAACTCCACGCTTGTCGTTAGCCAACGGCACATGCATGTATTGGCTCCCGTGCGACTGACCACTCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  2:777134‑M2/2‑82 (MQ=255)
                                                             gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCa                                                                                <  1:284066‑M2/65‑1 (MQ=255)
                                                             aaGTTAACCTCCGCCGTTGCAGAGAGCCAACCGCAGAATCAGGTAGTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  2:406861‑M2/1‑82 (MQ=255)
                                                               gTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGTCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggga                                                                              <  2:532493‑M2/143‑64 (MQ=255)
                                                                ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                             <  2:85137‑M2/143‑65 (MQ=255)
                                                                ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                             <  2:846225‑M2/143‑65 (MQ=255)
                                                                 tAAACGCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                            >  1:449216‑M2/1‑78 (MQ=255)
                                                                   cacCCCACGCCTGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                          >  1:266283‑M2/2‑76 (MQ=255)
                                                                   aaCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                          >  1:707337‑M2/1‑76 (MQ=255)
                                                                    aCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatggaacagggatcatc                                                                         <  1:627626‑M2/143‑69 (MQ=255)
                                                                    aCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                         >  1:366042‑M2/1‑75 (MQ=255)
                                                                     cTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGAGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagctaatgtttgtcagctggagccatagaacagggatcacca                                                                        <  2:231013‑M2/143‑70 (MQ=255)
                                                                       gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCgg                                                                      <  2:613522‑M2/75‑1 (MQ=255)
                                                                          cGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                   >  2:230891‑M2/1‑69 (MQ=255)
                                                                              catgatgaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCAAGTTGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCt                                                               <  1:1007706‑M2/82‑1 (MQ=255)
                                                                                ccGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCGGACAGACTAAggagggtgcgaacaagtccctgatatgaggtcatgattggcatcgtgagccgtagaacagggttcatcatgagtcatcaa                                                             <  1:89934‑M2/143‑81 (MQ=255)
                                                                                  aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATa                                                           >  1:100155‑M2/58‑143 (MQ=255)
                                                                                   aTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                          >  1:1041744‑M2/1‑60 (MQ=255)
                                                                                        tgaaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTg                                                     <  1:77853‑M2/92‑1 (MQ=255)
                                                                                           agtgactgagtcagccgagaacgatttccccgcagactcgcaccgtccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGa                                                  <  2:566955‑M2/95‑1 (MQ=255)
                                                                                            cGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGAATAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggatcatcatgagtcgtcaccttaccttcgcc                                                 <  1:977481‑M2/143‑93 (MQ=255)
                                                                                              gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                     >  2:677481‑M2/46‑89 (MQ=255)
                                                                                              gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                     <  1:677481‑M2/44‑1 (MQ=255)
                                                                                              gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGAGGGCTGATCAACGTGCTATcc                                               >  1:89314‑M2/46‑143 (MQ=255)
                                                                                               actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATAAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCa                                              >  1:628427‑M2/45‑143 (MQ=255)
                                                                                                gAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                             >  2:538053‑M2/1‑47 (MQ=255)
                                                                                                 aaTCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                            <  1:529179‑M2/143‑98 (MQ=255)
                                                                                                     tcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGc                                        >  1:577513‑M2/39‑143 (MQ=255)
                                                                                                     aTGTATTGTGTGCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagagcatgtttgtcatctggagccatagaacagggtgcatcaggagtcatgaactcaacttggccgacagtgaa                                        <  1:121656‑M2/143‑102 (MQ=255)
                                                                                                        tATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                     >  1:631504‑M2/1‑39 (MQ=255)
                                                                                                        tATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagatatcaacttaccttcgccgacagtgacttc                                     <  2:694733‑M2/143‑105 (MQ=255)
                                                                                                          ttGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                   >  1:661238‑M2/1‑37 (MQ=255)
                                                                                                           gagaagaatttccccgcttattcgcaccttccCTAAGTAAGCTGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGCTGGCTGATAAAAGTGCGATCCAGTCGGCGTCAGc                                  >  1:786635‑M2/33‑143 (MQ=255)
                                                                                                            gtgtCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 >  1:85137‑M2/1‑35 (MQ=255)
                                                                                                             gaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTg                                <  1:70019‑M2/113‑1 (MQ=255)
                                                                                                                    tGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattaagcagtaagcgc                         <  1:386594‑M2/143‑117 (MQ=255)
                                                                                                                     tccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGAc                        <  2:444030‑M2/121‑1 (MQ=255)
                                                                                                                       gACTGGCCACGCCTGACAGACTGAgggaggtgcgaagaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacgtaccttcgccgacagtgaattcagcagtaagcgccgt                      >  2:373607‑M2/1‑24 (MQ=255)
                                                                                                                       gACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                      >  2:618144‑M2/1‑24 (MQ=255)
                                                                                                                        ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTgccctgggcggt                     >  1:715456‑M2/20‑138 (MQ=255)
                                                                                                                        ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCaa                     >  1:381848‑M2/20‑143 (MQ=255)
                                                                                                                           gacgtcgcctgACAGACTAAggtaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                  >  2:946161‑M2/6‑20 (MQ=255)
                                                                                                                            ttattcgcaccttccCTAAGTAAGATGGGGAAAACATGAGCACCATTGTGCTTTTTTTACCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGAGCCAGCCGGCGGCAGCTCCCCTCGCCCCACGcc                 >  1:368672‑M2/16‑143 (MQ=255)
                                                                                                                            aCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgaggcatcaacttcccttcgccgacagcgaattcagcagtacgcgcccccagac                 <  1:351533‑M2/143‑125 (MQ=255)
                                                                                                                             tattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCt                <  1:16779‑M2/129‑1 (MQ=255)
                                                                                                                              cACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca               <  1:988692‑M2/143‑127 (MQ=255)
                                                                                                                                 gCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagac            <  1:108705‑M2/143‑130 (MQ=255)
                                                                                                                                 gCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacggggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaggcgccgtcagacgagaa            <  2:789434‑M2/143‑130 (MQ=255)
                                                                                                                                  tctGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa           >  2:893109‑M2/2‑13 (MQ=255)
                                                                                                                                  gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATCAAAGTGCGATCCAGACGGCGTCAGCTGCACTGGACCAACGACTTggcg           >  2:816491‑M2/10‑143 (MQ=255)
                                                                                                                                   cTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa          >  1:846225‑M2/1‑12 (MQ=255)
                                                                                                                                   acaacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagatcagaaaa          >  2:948808‑M2/4‑12 (MQ=255)
                                                                                                                                    tGACAGATGAAggaagaggagaacaagaccctgagatgggaacaggtttgccatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag         >  1:61067‑M2/1‑11 (MQ=255)
                                                                                                                                    tGACAGACTAAggaaggtgcgaacaagtccctgatctgcgatttggtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcggcaggaagcgccggcagaccaggaaag         <  2:582938‑M2/143‑133 (MQ=255)
                                                                                                                                      cgtccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGGTTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGGGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACAAACGCCTTCGCGGATg       <  2:288341‑M2/138‑1 (MQ=255)
                                                                                                                                       cAGACTAAggaaggggcgaacaagtccctgataggagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga      >  2:603681‑M2/1‑8 (MQ=255)
                                                                                                                                         ccCTAAGTAAGAGGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATgcgc    <  1:782404‑M2/141‑1 (MQ=255)
                                                                                                                                         aacTAAggaaggtgcgaacaagtccctgatatgagatcatgattgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcaccagtaagcgccgtcagaccagaaaagaacat    <  2:665672‑M2/142‑138 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaagaagcccctgatttgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  >  2:630485‑M2/1‑4 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtccacgccgtcagacgagaacagagctttc  <  2:217610‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaggtgtt  <  1:945006‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt  >  1:296373‑M2/1‑4 (MQ=255)
                                                                                                                                           |                                                                                                                                              
ATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526311‑3526591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.