| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,455 | +G | intergenic (‑2/+1) | glpR ← / ← glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,455 | 1 | . | G | 98.5% | 197.9 / ‑3.4 | 65 | intergenic (‑2/+1) | glpR/glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (22/42); total (22/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGC‑CAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTG > NC_000913/3560314‑3560585 | tCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGcg > 2:374528/1‑142 (MQ=255)tCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TCGcg > 1:87073/1‑142 (MQ=255) gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGACGGCAGCCCCGCCCCGCCATGA‑TGGcgca > 1:1082722/1‑140 (MQ=255) gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGcgca > 1:916902/1‑140 (MQ=255) gATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGcgca < 1:896093/143‑4 (MQ=255) aTAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGcgcag > 1:228508/1‑139 (MQ=255) aTAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGCGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGcgcag < 1:631206/143‑5 (MQ=255) acctgCGTCAGGCCATTGGGGATGTTCCCCGCCACTTTGCGGGCGATCCGCTCCTTTTCTTCGGTCTGGGTGGCCTTGCGACCGTGCCACGCCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAt < 2:318122/139‑1 (MQ=255) cAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑Ca < 1:557744/143‑1 (MQ=255) gTCGAGCTATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGtt < 1:1207485/143‑1 (MQ=255) gcgtgCCATTGGGGTCTTCGTCCGCCGCTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGttt < 2:1309911/139‑1 (MQ=255) cGAGCCCTTGGGGAGTTGCTCCGCCACTTTGCGGGCGCTGCGCTATATTTCTGCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGtttt < 1:253778/143‑1 (MQ=255) gAGCCATTGGGGATTTGCTCCGCCCCTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGTCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTg < 1:221938/143‑1 (MQ=255) gCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCt < 1:612472/143‑1 (MQ=255) gagtGGGGTTGTGCCCCGTCTGTTTGTGGTCGATGCGCTCTTTTGCTTCGGTCTGGGTGGCCTTGCGATGGGGCCACGGCGTGTTAACCGAACTGGCCGGCCGTGTCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTcc < 2:1333084/140‑1 (MQ=255) aTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTGTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGGACTGGAAGGCAGCGCCGCAGCGCCAGGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCg > 1:18332/1‑143 (MQ=255) ttGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAACGCAGCGCCGCACCGCCATGC‑TGGCGCAGGCG‑CGGGTTTTGCTcctc > 2:579970/1‑141 (MQ=255) gggATTTGCTCCGCCACTCTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGAGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAg < 1:861808/143‑1 (MQ=255) ggATTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGc < 1:699396/143‑1 (MQ=255) gATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCt > 1:1318785/1‑143 (MQ=255) tttGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCa > 1:421814/1‑143 (MQ=255) cTCCGCCACTGTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGa < 1:209405/143‑1 (MQ=255) tCCGGCACTTTGCGGGCGAGGCGCTCTGTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAg < 1:574597/143‑1 (MQ=255) cGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCACTGAggc > 2:277360/1‑142 (MQ=255) cACCTTGCGGGCGATGCGCTCTTTTTCGGCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTcgc < 1:235966/143‑1 (MQ=255) aCTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTCTTGCTCCGCCACCCCGTTGAGGTcgcg > 2:899967/1‑143 (MQ=255) ctgtGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcgg < 1:785124/140‑1 (MQ=255) tttACGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggc < 1:875800/143‑1 (MQ=255) tttACGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcggc < 1:874447/143‑1 (MQ=255) tGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAAGA‑TAGCGCAGGAT‑CAGGGTTTGCTCCGCCAGCCCATAGCCGTCGCGGCGa > 2:304569/1‑143 (MQ=255) gCGGGCGATGCGCTCTGTTGCTGCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAGCCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGaa < 2:1098250/143‑1 (MQ=255) gggCGATGCGGTCCTTTTCTTCGGGCGGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATa < 1:1115328/143‑1 (MQ=255) gggCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATa < 1:1114515/143‑1 (MQ=255) gCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGt < 1:659978/143‑1 (MQ=255) cgcgCTTTTTCTTCGGTCTGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCgg < 1:1240542/143‑1 (MQ=255) cgcTCTTTTTCTTCGGTCGGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCgg < 2:301650/143‑1 (MQ=255) gctgtggttcttcGGTCTGGGTGTCCTGGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCGGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCggg < 2:655226/136‑1 (MQ=255) tctTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCAGGCt > 2:865541/1‑143 (MQ=255) tctTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAA‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCt > 1:1091704/1‑143 (MQ=255) tttttCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTgc > 2:114654/1‑142 (MQ=255) tttttCTTCGGTCTGGGTGGCCTGGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGa < 1:855360/143‑1 (MQ=255) gggcgggggggCCTTGGGATCGTGCCACGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAAt < 2:1095636/138‑1 (MQ=255) ggTCTGGGTGGCCTTGCGATCGTGCCACGTCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAAt < 2:238187/143‑1 (MQ=255) ggcgggggggCCTTGCGCTCGTGCCGCGGCGTGTGAGCCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGGTCGGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATg < 2:232739/139‑1 (MQ=255) gTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGC‑TGGCGCCGGATCCAAGTAGCGGTTTG‑CTTCTCATCGCGGTCGCGGCGAGTAGTCTGCGGGCTGACGGAGAAATg > 1:310172/1‑143 (MQ=255) tGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑CGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGGACTGctc > 1:1061668/1‑143 (MQ=255) gggTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGctct < 1:811818/143‑1 (MQ=255) gggTGGCCTGGCGATCGTGCCACGGCGGGTTAACCGAACTGGAAGGCGGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGctct < 1:884523/143‑1 (MQ=255) tgtccTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTAcc < 1:1323540/140‑1 (MQ=255) tGGCCTTGCGATCGTGCCACGGCGTGTTAACCGCACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGACTCGTCTGCGGGCTGGCGGAGAAATGCTCTAcc > 1:320558/1‑143 (MQ=255) gCCTTGCGCTCGTGCCACGGCGTGTTAACCGTACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAg < 2:493121/143‑1 (MQ=255) ccTTGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTAcccgg < 1:1227819/143‑4 (MQ=255) gATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCg < 1:161994/143‑1 (MQ=255) tCGTGCCGCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCGGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGt > 1:442005/1‑143 (MQ=255) gggCCACGGCGTGTTGACCGCACTGGAAGACAGGGCCGCACCGCCATGA‑TGGCGCGGGAT‑CGGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTAc < 2:182840/141‑1 (MQ=255) gCCCCGGCGTGTCAACCGGACTGGAAGGCAGCGCCGCACCGCCAGGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTg < 2:838824/143‑1 (MQ=255) gCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTg > 1:448529/1‑143 (MQ=255) ccACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGCCGGAGAACTGCTCTACCAGCTCTTCGGCACTgg > 2:714963/1‑142 (MQ=255) cACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGAc > 1:919324/1‑143 (MQ=255) cACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTCTTGCTCCGCCAGCTCATTGAGGTCGCGGCGCATAGTCTGCGGGCTGCCGGAGCAGTGCTCCACCAGCTCTTCggaccgggc > 2:864758/1‑136 (MQ=255) tAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGGGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCACAGCGGTACTGACATAAGCcagc > 2:131483/1‑143 (MQ=255) gagcTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCCCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAACTCTTCGGTACTGACATAACCCTGCTGttt < 1:1080066/140‑1 (MQ=255) gAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGAGAAGAGTCTGCGGGCTGACGGGGAAATGCGCTCCCAGCTCGTCGGTACTGACATAACCCTGGGGttt > 1:506479/1‑143 (MQ=255) cTGGAAGGCGGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc < 2:835480/143‑1 (MQ=255) cTGGAAGGCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAAc < 2:228508/143‑1 (MQ=255) aGGCACCGCCGCTCCGCCATGA‑TGTCGCAGGAT‑CAGGTCTTGCTCCGCCCGCTCATTGACGTCGCGGCGTAGAGTCTGCTGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTCACATAACCCTGCTGTGTAACCAGtt < 2:427139/143‑1 (MQ=255) ggCAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCGCTACCAGCTCTTCGGCACTAACCTCAACCCGCTGCTTAAGCAgcgc > 2:943240/1‑140 (MQ=255) cAGCGCCGCACCGCCATGA‑TGGCGCAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGa < 1:42099/143‑1 (MQ=255) aGCGACGCACCGCCATGA‑TGGCGCAGGGT‑CAGGGGTTGGTCCGCCGGGTCATTGAGGTCGCGGCGAATAGTCTGGGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGat < 1:398685/143‑1 (MQ=255) gcgcCTCTCCTCCATGATTGCC‑CAGCAT‑CAGTTTTTGCCCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGata < 1:888386/143‑1 (MQ=255) cgccgcACCGCCATGA‑TGGCGCAGGAT‑CAGGTTGTGCTCCGCCAGCTCATTGAGGTCGCGGCGAAGAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTCCTGACATAACCCTGCTGTTTAACCAGTTCGataa > 2:50182/1‑143 (MQ=255) cGCCATGA‑TGGCGCCGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGTGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTtg < 1:312672/143‑1 (MQ=255) | TCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGA‑TGGC‑CAGGAT‑CAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTG > NC_000913/3560314‑3560585 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |