| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 110 (1.460) | 68/284 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 116 (1.540) | 69/284 | 0.0 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 212 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 | tggggataacgccttaaatggcgaagaaacggtctacataggctgattcaaggcagttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccctcttattcgcaccttccc > 2:908522‑M1/143‑143 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcagcttccc < 1:1183477‑M1/1‑1 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:935772‑M1/1‑1 (MQ=255)tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 1:817491‑M1/1‑1 (MQ=255)gcaaAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAAGCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAAc < 1:190156/143‑1 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt > 1:231610‑M1/142‑143 (MQ=255) aaaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACACACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACCAGCACCGCACAACAAACTa > 2:1013496/1‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 1:350112‑M1/4‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:1257673‑M1/140‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:109621‑M1/140‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttaagggagacacaatcggcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCtac < 2:544700‑M1/4‑2 (MQ=255) cgataacgacctaacggacgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:318657‑M1/140‑143 (MQ=255) gagactgccttaaatggcggggaaggggtctgaataggttgattcaaggcatttacgggagaaaaaatcggctcacacatgcagacatgatatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 2:448121‑M1/139‑143 (MQ=255) ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:34403‑M1/138‑143 (MQ=255) agcgccttaaatggctaggaaagggtctaagtaggccgattcaagccatttacgggagaaaaaatcggctcaaacatgaagcaatgaaatgactgattcagccgagaagaatttccccgcttattcgcaccttccCTAATTaa > 2:627719‑M1/136‑143 (MQ=255) acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttatgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctaattcgcaccttccCTAAGtaag < 2:1147872‑M1/9‑2 (MQ=255) aaaCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaga > 2:403115‑M1/1‑137 (MQ=255) aaCAGGAATAGTCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggt < 2:826192‑M1/143‑8 (MQ=255) gAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaa > 2:405684‑M1/1‑131 (MQ=255) gAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaa < 1:877327‑M1/143‑13 (MQ=255) aatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgcccccg < 1:863572‑M1/143‑17 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 1:602931‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAACGca < 2:438457‑M1/23‑1 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 1:996054‑M1/113‑143 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACtta < 1:1052686‑M1/35‑1 (MQ=255) aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaa > 1:1288307‑M1/108‑143 (MQ=255) aaataggctgattcaaggcatctacaggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaa > 2:665389‑M1/108‑143 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATCAAATAAAAAGAAAGGCAACAATCAACttaat < 2:1172090‑M1/37‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccgtccCTAATTAAATACGAAAAAAGGCAACAATCAACttaatgttaa < 2:425922‑M1/42‑1 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:171137‑M1/143‑39 (MQ=255) tgattcaaggcatttacgggcgacaaaatcggctcaaacatgaagaaatgaaatgactgagtaagccgagaagaatttccccgcttattcacaccatcaCTACATAGATACAAGGAAAGGCAACAATCAactaaatgttaaag < 2:959757‑M1/44‑3 (MQ=255) tgattcaaggcatttacgggagaaaaagtcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 2:921060‑M1/100‑143 (MQ=255) ctattcaaggaagttacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccctgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 2:684857‑M1/100‑143 (MQ=255) tCAAAATAACTCACCGTAAATAATGATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc < 2:580425‑M1/143‑42 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgatatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGa > 2:600579‑M1/99‑143 (MQ=255) cAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca < 2:516407‑M1/143‑43 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACATAATGTTAAGAAAATGt < 2:1091473‑M1/50‑1 (MQ=255) aaCTCTACGCAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 2:783735‑M1/143‑49 (MQ=255) aaCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 1:1136291‑M1/143‑49 (MQ=255) aCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:494188‑M1/143‑50 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:1001180‑M1/90‑143 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:941589‑M1/90‑143 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAc > 1:80679‑M1/89‑143 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACata > 1:380393‑M1/86‑143 (MQ=255) gTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagaacaagtttgtcatcgggagccataga > 2:553221‑M1/1‑87 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 1:929513‑M1/63‑1 (MQ=255) gaaaacatccgaccaaacatgaaaaaatgaaacgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGCAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc > 1:1092277‑M1/79‑143 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc < 1:1265691‑M1/65‑1 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTCTACATATATTAAcc < 2:523392‑M1/66‑1 (MQ=255) tcatcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACACACACTTACCGCACAACAAACTAAgaacgatgcgaacaagtccctgatatgaaatcatacttgtcatctggcaccatagaaacgaggt > 2:1278545‑M1/1‑79 (MQ=255) gCTATTAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttgatcag > 2:1131639‑M1/1‑73 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcacagcttattcgccccttacCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTCAAGAAATGATATGAATATATTAACCACAtgttga < 2:884801‑M1/75‑3 (MQ=255) tataAATAATCACTTTCATGCCATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:176774‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:70557‑M1/143‑73 (MQ=255) tataAATAAGCACGTGCATGCAATGCAAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:1290396‑M1/143‑73 (MQ=255) aatagtCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggttcgaacaagaccctgatataacatcatgagtgtcatgtggagccataggacagggaacatcatgaggca > 2:477694‑M1/1‑67 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa < 1:4139‑M1/85‑1 (MQ=255) ataaattaaatgactgactcagccgagaagaatttccccgcttattcgcacctgccCGAATTACATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATc > 1:467010‑M1/57‑143 (MQ=255) aCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttgatcatgagtcatcaactt > 2:899269‑M1/1‑60 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAGCAGACACTTACCGCACAACAAACTAAggaagatgcgaacaagacccagatatgagatcatgtttgtcatctggagccatagaacagggctcatcatgagtcatcaacttac > 2:816523‑M1/1‑58 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATAAGTaca < 2:607497‑M1/93‑1 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAGCAAACGAAggaaggtgcgggggcggccccgatatgagggcatggttttcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:315339‑M1/143‑92 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACCAGCAAAtgaagctgcgaacaagtctctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:696975‑M1/143‑92 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:1024565‑M1/143‑92 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATAGAAAGAAAGGCAACAACCAACGTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTAtttt < 1:781266‑M1/100‑1 (MQ=255) aCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:1003348‑M1/1‑47 (MQ=255) aCCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:798229‑M1/143‑97 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAACTAGAAAGAAAGGCAACAATCAACTTACTGTTAATGAAATCTTTTAAATAGATTAACCACTTGTTTAATCAGGAGACTCAGTACCCTATGTTCtt < 2:388868‑M1/103‑1 (MQ=255) aGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcctcatgagtcatcaacttacctccatccacagtg > 2:209069‑M1/1‑44 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccCTAATTCAATACAAAGAAAGGCAAAAATCAACTTAATGGTAATGAAATGTTTTACATATATGAACAACGTGTTTAAGGCGGAGCATCAGTACACGATTTTCTTATAAt < 1:1255688‑M1/108‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAGAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAtt < 1:532534‑M1/109‑1 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 1:61744‑M1/1‑36 (MQ=255) atgttaaaacagacaCTTACCGCGCAACACACTAAggaaggtgcgaacaactccctgacatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:57230‑M1/137‑109 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTCATGTTAATGAAATGTTATACATATATTAACCACTTGTTTAAGTCGGAGAATCACTACACTATATTATTATAATTACa < 2:733365‑M1/112‑1 (MQ=255) aagaatttccccgcttattcgcaccttccCTTATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt > 1:1271218‑M1/30‑143 (MQ=255) agaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAttt > 2:1052686‑M1/29‑143 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 1:89717‑M1/119‑1 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 1:253911‑M1/119‑1 (MQ=255) aaCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcctgtttgtcatctggagccatagaacagggttcatcatgagtaatcaacttaccttcgccgacagtgaattcagcagtaagcg > 2:240021‑M1/1‑28 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc > 2:1353531‑M1/1‑27 (MQ=255) tccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAAtt < 1:648728‑M1/121‑1 (MQ=255) gACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 1:119744‑M1/143‑120 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat > 1:1018891‑M1/21‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:283884‑M1/124‑1 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca < 2:838929‑M1/143‑127 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcaccgtcagacca > 2:632905‑M1/1‑17 (MQ=255) ccGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag < 1:1078350‑M1/143‑128 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCgg < 2:422023‑M1/134‑1 (MQ=255) ctgacagactAAggaagctgcgaacaggtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 2:330025‑M1/140‑132 (MQ=255) accacaaactCAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 1:453235‑M1/140‑132 (MQ=255) caacaaACTAAggagggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag < 2:807252‑M1/143‑133 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTGAATGCGGAGAATCAGTACACTATTTGCTTATAATTACATTTGAAATTATATGATCACCGGGa > 2:929779‑M1/8‑143 (MQ=255) cttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGt > 1:1193997‑M1/6‑143 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 1:582613‑M1/1‑5 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt < 1:121834‑M1/143‑139 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtgagaccagaaaagagatttt > 1:728129‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 1:1343319‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:937785‑M1/143‑140 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:448906‑M1/143‑140 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccgtcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 2:29462‑M1/143‑140 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |