| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 86 (1.420) | 56/284 | 0.1 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 88 (1.450) | 60/284 | 0.0 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 162 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 | tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 2:50394‑M1/1‑1 (MQ=255) gggataacgccttacagggcgaagacaagttaaatataggccgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 2:784255‑M1/3‑1 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 1:1005716‑M1/3‑1 (MQ=255) tgataacgctgtaaaaggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:227892‑M1/140‑143 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgaggaggatttccccgcttattctcaccttccccaa < 1:555641‑M1/4‑4 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:364547‑M1/140‑143 (MQ=255) ggataacgccgtaactggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaaggactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:334504‑M1/140‑143 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 1:81802‑M1/5‑1 (MQ=255) gataacaccttaaatggcgaagaaacggtctaaataggctgaatcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 1:279394‑M1/139‑143 (MQ=255) ataacgcctgaagtggcgaagaaacggtctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgggtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:599801‑M1/138‑143 (MQ=255) cgaAACAGCAAGAAGCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaa < 1:265051‑M1/142‑5 (MQ=255) gAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaag < 1:873729‑M1/143‑6 (MQ=255) aacgccttaaatggcgaagaaacggtctaaataggcttattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctagcttt > 1:423680‑M1/136‑138 (MQ=255) acgccttaaatggcgaagaaacggtccaaatatgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa > 1:291735‑M1/135‑143 (MQ=255) aaCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagtt > 2:901315‑M1/1‑136 (MQ=255) aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcg > 1:736828‑M1/1‑133 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaa > 2:916312‑M1/129‑143 (MQ=255) gcgaagaaaccgtctagattgtcggattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccgcgcttattcgcaccttccCTAATTAAATACAAAGAAAgg > 2:171443‑M1/123‑143 (MQ=255) cGAAGTGGGATGTTGCGCACAGTCAAAATCACTCGCACGT‑TAGGATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 2:771081‑M1/143‑20 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgctccttccCTAATTACAtacaaagaaagaca < 1:290970‑M1/23‑4 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAAATCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGCTAAGCTATTTTTAAACAAACAATAACCACACAAGAAAATAAggaaggtacgaacaagaacc > 2:1060414‑M1/1‑123 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaaca > 1:668772‑M1/118‑143 (MQ=255) gggATGTTGCGCACATTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgata < 1:490511‑M1/143‑26 (MQ=255) ggATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatat > 2:378630‑M1/1‑117 (MQ=255) acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATc < 1:123699‑M1/29‑1 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 1:15671‑M1/113‑143 (MQ=255) aTGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:510534‑M1/143‑29 (MQ=255) tGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACGTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgag < 2:793747‑M1/143‑30 (MQ=255) tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcaCGAATTAAATACAAAGAAAAGAAAAAATCAACt < 1:1075640‑M1/33‑1 (MQ=255) gTTGCGCACAGTCAAAATAACTCAC‑CGTAAATTATTATCTGCTATAAATAATCACTTTCATGGAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga < 1:552382‑M1/143‑31 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 2:847943‑M1/37‑1 (MQ=255) gcACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatg > 1:482158‑M1/1‑108 (MQ=255) atgggccgattcaaggaatttacgggagaaaagagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg > 2:880992‑M1/106‑143 (MQ=255) atcggctgattaaaggcatttacgggggaaaaaatcggctcaaacatgaagaaaggaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAGTTAAATACAAAGAAAGGCAACAATCAACttaatg > 2:284089‑M1/106‑143 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg > 1:1045981‑M1/106‑143 (MQ=255) caGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:648293‑M1/143‑39 (MQ=255) caGTCAAAATAACCCAC‑CGTAAATGATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACATACACTTACCGCACAACAAACTAAggaaggtgcgaacatgtccctgatatgagatcatgttt < 2:1084952‑M1/143‑39 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa > 1:1005068‑M1/102‑143 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattagcaccttcaCTAATTAAATACAAAGAAAGGCAACAatccacttaaagataa < 2:3203‑M1/42‑7 (MQ=255) tgattcaaggcatttacgggagaaaacatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccagcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttagtgttaatg < 2:758405‑M1/44‑1 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa > 1:514622‑M1/98‑143 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAACTACGCAGCAAGGCATCAATCAACTTAATGCTaatgaaacgat < 1:346067‑M1/51‑5 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt > 1:53022‑M1/92‑143 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttgcccgcttattcgcaccttacCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGgttt < 2:863163‑M1/53‑1 (MQ=255) catttacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:567434‑M1/90‑143 (MQ=255) cAC‑CGTAAATAATCATCTGCCATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgctaacaaggccctgatatgagatcatgtttgtcatctggagcca < 1:46209‑M1/143‑53 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAACCAGCTTCATGTTAATGAAGTGTTTTAc < 2:701929‑M1/55‑1 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacacgcttattcgcaccttccCTAATTAAATACAAAGAAAGACAACAATCAACTTAATGTTAAtgaaatgatctac < 2:472026‑M1/55‑7 (MQ=255) gc‑cgCAAATACCCACCTGTGATAAATAAGCACTGTCACGCAATACCAGATAAGCTATTTTTAAACAGACACTTCCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:340069‑M1/142‑54 (MQ=255) aC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:753703‑M1/1‑90 (MQ=255) gTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatctttgtcatctggagccataga > 2:687008‑M1/1‑87 (MQ=255) gaaatAATCATTTGCTATAAATCATCACTTTCATGCAATACCATATAAGCTATTGTTAAACAGACACTTACCGCACCACAAACTATggaagctgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 2:915213‑M1/142‑58 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 1:1086402‑M1/63‑1 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTaa < 2:599589‑M1/64‑1 (MQ=255) taatCATCTGCGATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACGTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg < 2:148097‑M1/143‑62 (MQ=255) gaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc > 1:1056417‑M1/79‑143 (MQ=255) acaaaatcggctcaaacaagaagaaatgaaatgactgagacagccgagaacaatttccccgcttattcgcacatacaCTAAATAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTATACATATATTAAcc < 2:629390‑M1/66‑1 (MQ=255) aatCATCTGCTATAAATAATCACTTTCATGCAATACAAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAAGTCCgtttggtgcgatcacgtcgctgatgtgagatcatgtttgtcatctggagccatagaacaggg > 1:976880‑M1/1‑81 (MQ=255) actGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat < 2:339280‑M1/142‑68 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTACATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAGTGCTTTACATATATTAACCACTTGt < 1:326779‑M1/72‑1 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 1:16893‑M1/1‑74 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCGCAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:537863‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:144922‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatcgggagccatagaacagggttcatcatga > 1:848360‑M1/1‑71 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt < 1:595916‑M1/77‑1 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcatattcgcaccttccCTAAGTAAATACAACGACAGGCAACAATCAACTTACTGTTAATGAAATGTTCAACATATAATAACCACATGTTTAAt < 2:588875‑M1/77‑1 (MQ=255) ataaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggacggtgcgaacaagtccctgctatgagatcatgtttgtcatctcgagccatcgaacagggttcatcctgcg > 1:384742‑M1/1‑70 (MQ=255) taaataaTCACTTTCATGCAATACCAGATAAGCTATATTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagg > 2:474652‑M1/1‑69 (MQ=255) aaataaTCACTTTCATGCACTACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggacggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcacgagtc > 2:961159‑M1/1‑68 (MQ=255) aaacatgaacaaacaaaatgactgcgtaatccgataagaatttccccgcttatgcgtaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAAGGGTAATGAAAGGTTTTACATATATTAACCACTTGTTTAATGc > 2:1034325‑M1/65‑143 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGATTTACATATATTAACCACTTGTTTAATGCgg < 2:207323‑M1/81‑1 (MQ=255) tCACTTTCACGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 2:658162‑M1/143‑82 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt < 1:778935‑M1/86‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt < 1:428863‑M1/86‑1 (MQ=255) aCTTTCATGCAATACCAGATAAGCTATTTTTAGACAGACACGTACCCCCCAACAAACTAAggaagttgcgaacaagtcccggatattagaacatgtttgtcatctggagccatagaacagggtccatcatgtgtcatcaactt > 2:725631‑M1/1‑60 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTaca < 1:779023‑M1/93‑1 (MQ=255) aTGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 1:448142‑M1/143‑90 (MQ=255) aTGCAATACCAGATAAGCTATTTTTAAACAGACAATTACCGCACAACAAACTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcgtcaaatgacattc > 2:703454‑M1/1‑54 (MQ=255) tGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctagagccatggaacagggctcatcaaacgtcatcatcttccctccg > 2:376251‑M1/1‑53 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTCTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTacac < 2:735874‑M1/94‑1 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 1:699314‑M1/143‑92 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaatagggttcatcatgagtcatcaacttagcttcgacgac > 2:195366‑M1/1‑48 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTAtttt < 2:422266‑M1/100‑1 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 1:390304‑M1/43‑143 (MQ=255) aGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg > 1:1036590‑M1/1‑44 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTtata > 1:183362‑M1/38‑143 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTAc > 1:599589‑M1/33‑143 (MQ=255) agttttcaACAGACACGTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:610832‑M1/141‑109 (MQ=255) tttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta > 2:552535‑M1/1‑32 (MQ=255) atttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaa > 1:305772‑M1/26‑143 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAACGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 2:315952‑M1/119‑1 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat > 2:290970‑M1/21‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:895987‑M1/124‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 1:716274‑M1/124‑1 (MQ=255) acacTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcaagaaacatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 1:404240‑M1/1‑23 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCgg < 1:564956‑M1/134‑1 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCgg > 1:97116‑M1/10‑143 (MQ=255) cttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGt > 1:216174‑M1/6‑143 (MQ=255) caaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttgcgcgacatggaattcagcggtaagcgccgtcagaccagaaaagaga > 1:245357‑M1/1‑8 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 2:65841‑M1/1‑4 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCAC‑CGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG > NC_000913/1979344‑1979628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |