New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3941885	8 (0.130)	7 (0.120)	5/280	8.0	47.0%	noncoding (78/1542 nt)	rrsC	16S ribosomal RNA of rrnC operon
	?	NC_000913	= 4035620	NA (NA)					noncoding (90/1542 nt)	rrsA	16S ribosomal RNA of rrnA operon
Rejected: Coverage evenness skew score above cutoff.

GATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCT  >  NC_000913/3941822‑3942023                                                                |                                                                                                                                            gagcATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAactact                                                             <  2:233127/140‑1 (MQ=1)                                                  caaaggaaaCAGTAAACAGCTGGTTGTTTCGCTGACGAGTGGTGGACGGGTGTGTAATGTCTGGGAAACTTCCTG‑ATGTAGGGGGATAACTACTGGAAACGGGAGCTACCACCGCATAACGTCGCAAGACCAAAGAGGGGGAc            <  2:934510/136‑1 (MQ=1)                                                       ggaaCATGACACAGCTTGCTGTTGCGCTGACGAGTGGCGGACAGGTGAGTAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAACTACTAGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCg       <  2:294051/141‑1 (MQ=11)                                                       gTAACAGTAGACGGCCTGCGGTTGCGCTGACGAGTGGCGGACGGGTGAGGAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCg       <  1:799/143‑1 (MQ=11)                                                        ttaCATGACACCGCTTGCTGTCTCGATGACGAGTCGCGGAGGGGTGAGTTATGTCGGGGAAACTGCCTG‑ATGTAGGGGGATAACTACTGGAAACGGGAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCgg      <  2:820486/141‑1 (MQ=11)                                                        aacaaacaaaCAGCTTGCTGTACCGAGGAAGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTT‑ATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCgg      <  1:194446/136‑1 (MQ=11)                                                          aCAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGAGTGAGTAATCTGCAGGAAA‑TGCCCGCATGGCACGGGAAAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACATGCGGGc    >  2:486053/1‑143 (MQ=11)                                                           agcgAAACAGCAAGCTGTTTC‑CTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAACTACTGAATGTAAATGCTAGGACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCct  >  1:797388/4‑143 (MQ=11)                                                                |                                                                                                                                            GATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTG‑ATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCT  >  NC_000913/3941822‑3942023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.