| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 67 (1.110) | 52/284 | 0.1 | 98.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001508‑4001783 | agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc > 1:936168‑M2/143‑143 (MQ=255) gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct > 1:585209‑M2/142‑143 (MQ=255) tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctc < 1:701464‑M2/3‑1 (MQ=255) atggattgatcttgtcgaagcggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:200611‑M2/4‑1 (MQ=255) ggtttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 2:203920‑M2/6‑1 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagactcgccacgtgtctgtgaagacgacgacggcctgcatCTCcttc > 1:554109‑M2/137‑143 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggccacccgcccggaactggaagacatcgaagcatcggcacgttactttgcagacgacgacggcctgcatCTCcttct > 1:589964‑M2/136‑143 (MQ=255) tgatcgtgtcgatctggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagatatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 1:843309‑M2/10‑1 (MQ=255) atcttgacgaaccggacgacgacgagcgcctgcgcgcacaatctgaacttggccagaggctggcaacccgcccggaactggaagacaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt < 2:71508‑M2/12‑1 (MQ=255) cttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttct < 1:655586‑M2/14‑1 (MQ=255) tcgacccggacgacgcgtagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:1062348‑M2/18‑1 (MQ=255) tcgaaccggacgacgacgagcggctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:350113‑M2/18‑1 (MQ=255) tcgaaccggacgacgacgagcgactgcgagtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:161240‑M2/18‑1 (MQ=255) cgaaccggacgacggcgagcgactgcgcgtacaatcggaacttggccagagcctggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 2:708339‑M2/19‑1 (MQ=255) cagaccggcccacgacgagcccctgcgcgtacactctgaacttggccagcgcctggcaacccgcccggaactggaagccatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 1:420977‑M2/19‑1 (MQ=255) accggacgaccacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacctagaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAt < 1:156065‑M2/22‑1 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 2:632329‑M2/24‑1 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAaaataca > 1:886615‑M2/119‑140 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg > 1:701507‑M2/118‑143 (MQ=255) cgacgactagcgactgctcgtacaatctgaccttggccagagccttgcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:703406‑M2/28‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:593389‑M2/28‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:84048‑M2/28‑1 (MQ=255) gccgacgcgcgactgcgcgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg < 2:1011974‑M2/29‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATc > 1:648453‑M2/112‑143 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcatggatTTCTGGTTTCGTCTTTGAAGATGCGGAAAATCACg > 1:741686‑M2/109‑143 (MQ=255) gtctgcgcgtacactctgaacttggctagaccctggcaacccgcccgcaactggaagacatcgaagcatcgccacgtttctttgaagacgacgacggcctgcatCTCCCTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg < 2:290308‑M2/39‑1 (MQ=255) gcggacaatcggaacgtcgccagggcctgccctcgctctcggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTc < 1:848928‑M2/45‑1 (MQ=255) acaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt < 1:654764‑M2/49‑1 (MQ=255) tctgaactttgccacagcctggcaacccgtctggaactggaagacatggaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg < 2:1098462‑M2/53‑1 (MQ=255) gaactctgccagagcctggcaacccgcccggaactggaagacatcgacgcatcggcacgtttctttgatgacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAt < 1:573048‑M2/56‑1 (MQ=255) cttgtccagaccctggcgtcccgcctggaactgcaagacttggaagcatcggcacgtttctttgaagacgaggacggcctgcatCTCCTTCTTCTTCCTGGATGATGCGTAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 2:333554‑M2/59‑1 (MQ=255) ttggcaatagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc < 2:59145‑M2/60‑1 (MQ=255) gtggccagagcctggcaacccgcccggaactggaagacctcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc < 2:878019‑M2/60‑1 (MQ=255) gggccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 2:1044060‑M2/67‑1 (MQ=255) gagcctggcaacccgcccggaactggaatacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 1:479792‑M2/67‑1 (MQ=255) gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 1:487537‑M2/67‑1 (MQ=255) gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 1:471153‑M2/69‑1 (MQ=255) gcctggcaacccgcccggaacgcgaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:920941‑M2/69‑1 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCATTTACCATCCGTGAt > 2:753460‑M2/74‑143 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCCTCCgtggt > 1:665531‑M2/74‑141 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTAACTCCACTGTGGCACTTAccatccgctatcg > 2:286393‑M2/72‑137 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg < 2:584325‑M2/72‑1 (MQ=255) cccgcccggagctggcagccagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 2:1002175‑M2/78‑1 (MQ=255) cccgcccggaactggaagacatcgaagcatcgtcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCCAGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCATCt < 2:304489‑M2/78‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 2:625960‑M2/65‑143 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 1:952222‑M2/83‑1 (MQ=255) gaactggaagacatcgaagcatcggcacgattctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTAGAAGATGCGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATCCGTGATGGCCGTCTGTTaacgc > 2:442384‑M2/58‑141 (MQ=255) gtgggagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 1:629839‑M2/89‑1 (MQ=255) gaagacatcgaagcatcggcccgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGCTGCGGAAGATCACGCCGGTAACTCCCCTGTGGCATTTACCATCCGTGATGCTCGTATGGTTCCTCtgcgtc > 2:118953‑M2/52‑142 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAGGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 1:168219‑M2/52‑143 (MQ=255) gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc > 2:995897‑M2/49‑143 (MQ=255) gacatcgaagcagcggcacgttgcgttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 1:702431‑M2/95‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgcgcgtg > 1:956830‑M2/46‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGAGATGGTCGCCTGTGTACGCTgcgtgagcctg > 2:708200‑M2/46‑143 (MQ=255) gCATCGCGATGTTTCTTTGAAGACGACGGGGTCGTGCAT‑‑‑‑‑CTTCTTCTTTTTCTGTGAAGATGCGTAAGAGCACGCCCACAACACAAATGATTCTTTTACCATGCGTGATGGTCGGCTGTTTACTCTGCGTGAGCGTGAACTGc < 2:1068872/143‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAc < 2:701507‑M2/101‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAc < 1:659646‑M2/101‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 1:304714‑M2/104‑1 (MQ=255) gcacttttctttgacgacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt < 2:1043767‑M2/110‑1 (MQ=255) cggttctttgaaggcgacgacgggctgcatCTCCTTCTTCTTCTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 1:73337‑M2/113‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTGTGGTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt > 2:323866‑M2/29‑143 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGGGCGTGAACTGCCCGCTTTTCGt > 1:1050572‑M2/29‑143 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:574899‑M2/115‑1 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTGTTCGTCTGTATCg > 1:388510‑M2/21‑143 (MQ=255) acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCCTTTCGTCGGTATCGTAt > 2:1084225‑M2/18‑143 (MQ=255) gacgactgcctgcatCTACTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTAACTCCACTTTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 2:53522‑M2/128‑1 (MQ=255) ccggcggcctgcatCTCCTTGTTCTTCTTTGACGACGCGGACGATCACGCCGCTAACGCCACTGTGTCAGTTACCATCCCTGATGGTCGTCTGTTTCCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCg < 2:1046295‑M2/129‑1 (MQ=255) ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc < 2:579302‑M2/134‑1 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001508‑4001783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |