New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2460605 =	34 (0.790)	3 (0.070)	3/266	6.2	8.6%	intergenic (‑136/+45)	fadI/yfcZ	beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein
	?	NC_000913	2460634 =	32 (0.790)					intergenic (‑165/+16)	fadI/yfcZ	beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAACACTCCCCTGTAAAAAAATAAATAAAGTGGTCTGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGT  >  NC_000913/2460468‑2460745                                                                                                                                          |                                                                                                                                             aTAACACTCCCCTGT‑AAAAAATAAATAAAGTGGGCTGACCTGGTCATAGTCTTAACCATTTTTTTACATTTAGCCAAGGGGAGGAAAGGGAAAGTGGGAGGTATGACACCGGGGGAAAAGGAGGAGGGGAAAGGAAACGcccc                                                                                                                                        >  1:12919/1‑143 (MQ=255)           ccTGTAAAAAAATAAATAAAGTGGTCTGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGTAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGCAAACGCCCCTGCCAGCaa                                                                                                                               >  2:46074/1‑143 (MQ=255)                      ataaataaAGTGGTCTGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGc                                                                                                                    <  1:135963/143‑1 (MQ=255)                                     tGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGagag                                                                                                     <  2:12919/143‑1 (MQ=255)                                     ggcccTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGagag                                                                                                     <  1:448896/140‑1 (MQ=255)                                       aCCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGa                                                                                                   >  2:237137/1‑143 (MQ=255)                                       aCCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGAGAGTACGTACCCGAGAGGa                                                                                                   >  2:612241/1‑143 (MQ=255)                                         cTGATCATAGTCTTAACCATTTTTTTACATTTAGCCCAGCGGAGGAAAGGGAACGTGGGAGCTATGACACAGCGCGAAAAGAAGAAGAGAAAAGAACACGCCCCTGCCAGCAACTGACGGCGGCGCGCGTACCCGCGAggcgc                                                                                                 >  2:595062/1‑140 (MQ=255)                                          tGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGCGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGCCGGCGGCGTCCGTACCCACGAGGAAtt                                                                                                >  2:123645/1‑143 (MQ=255)                                            accATAGTCTTAACCCAATTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTaa                                                                                              <  1:206658/141‑1 (MQ=255)                                             tCATAGTCTTAACCATTTTTTTACATTTAGCCAACTGGAGCAAAGGGAAAGAGGGGGCTATCACACCGAGCGCAGAGAATCAGAGAAAAGCAGACGCCCCCGCCAGCCCCGGACGGGGGCGTGCGTACCCGTGACGACCTAAc                                                                                             >  2:779474/1‑143 (MQ=255)                                                      tAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGACGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTCCGTACCCGCGAGGAATTACCGCCGACCCa                                                                                    >  1:125108/1‑143 (MQ=255)                                                           agtgctgtACGTTTAGGCAGGTGGAGAAAAGGGAAAGGGGGAGCTATGACACCGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                                                               <  1:304783/136‑1 (MQ=255)                                                                   aCATTCAGCCAACTGCAGAAAAGCGAAAGTGGGAGCTATGACACACAAAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAg                                                                       <  1:235684/143‑1 (MQ=255)                                                                     aTTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTAACCGCGCATAATTAACGCAGACCCAGCTGGAAAATCAGCa                                                                     >  2:343556/1‑143 (MQ=255)                                                                          gCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAAGGGCGTACGTACCCGAGAGGAATTAACGCCGACCCAGCTGGACAATCAGCATTTCa                                                                >  2:604348/1‑143 (MQ=255)                                                                           tcAAGTGGAGAAGAGGGTAAGTGGGGGCTATGACAGAGAGAGTAGAGAGGGGGGGGTGGGTTGGCGCGCGTGGTAGTGACTGACAGGTGCGTACGTATCGGGGTGGGACGGGCGCAGACCCAGCTGGAAAATCAGCATTTCAg                                                               <  2:199685/142‑1 (MQ=255)                                                                                  gagaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATGAACACAGACCCAGCAGGAAAAGCAGGAATTCAGCTGCGCa                                                        >  2:630604/1‑143 (MQ=255)                                                                                    gaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAgg                                                      >  1:221107/1‑143 (MQ=255)                                                                                     aaaaGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGc                                                     >  1:137448/1‑143 (MQ=255)                                                                                         gggAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                 >  2:744046/1‑143 (MQ=255)                                                                                         gggAAAGTGGGAGCGATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                 <  1:453875/143‑1 (MQ=255)                                                                                         gggAAAGGGGGAGCAAGGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCACCTGCCAGGGGCGTACGTACCCGCGAGGAATTACCGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                 <  1:463746/143‑1 (MQ=255)                                                                                          ggAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATCTCAGCGTCGCCCGCACAAg                                                >  1:754748/1‑143 (MQ=255)                                                                                                agggAGATATGATACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAAt                                          <  1:486292/142‑1 (MQ=255)                                                                                                 gggCGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGACAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATc                                         <  1:508169/143‑1 (MQ=255)                                                                                                  gaaGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACCCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGTATTAACGCAGTCCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCg                                        <  2:292351/141‑1 (MQ=255)                                                                                                     gCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAGATCGata                                     >  1:164733/1‑143 (MQ=255)                                                                                                        atgtaaaagagagAAAAGCAGAAGAGAAAAGAAGACGCCCCAGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc                                  <  2:47082/136‑1 (MQ=255)                                                                                                          gACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAg                                <  1:682688/143‑1 (MQ=255)                                                                                                                       aaggagaggAGAAAATAAAACGCCCCTGCCAGCAGCTGACAGGGGCGTACGTACCCGAGAGGAATTACCGCAGACCCAACTACAACAACCGCAGTGCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCa                   <  2:277026/143‑1 (MQ=255)                                                                                                                                  aaaagaaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAGAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCGGt        >  1:36669/1‑143 (MQ=255)                                                                                                                                  aaaagaaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGt        >  1:238270/1‑143 (MQ=255)                                                                                                                                    gtacgtaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGa      >  1:701594/7‑143 (MQ=255)                                                                                                                                        aaaCGGCCTTGCCTGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGt  <  1:679460/143‑1 (MQ=255)                                                                                                                                          |                                                                                                                                             ATAACACTCCCCTGTAAAAAAATAAATAAAGTGGTCTGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGT  >  NC_000913/2460468‑2460745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.