Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,875,5220CG32.4% 50.9 / 23.4 39L29V (CTG→GTG) yidXputative lipoprotein
Reads supporting (aligned to +/- strand):  ref base C (8/17);  new base G (12/0);  total (20/19)
Fisher's exact test for biased strand distribution p-value = 7.13e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875253‑3875795
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                 
gTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTg                                                                                                                                                                                                                                                                                 <  2:210263/272‑1 (MQ=255)
       ggtggtgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGAAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCAt                                                                                                                                                                                                                                                                        <  2:105376/270‑1 (MQ=255)
             ttcaTGTAATAAAAAATTATATTGTTGTACTAAAATTTAGATCCAAAAAAGAACAATGCATAAAAAAATTACATGCGTCGGGCAGAAAGCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCa                                                                                                                                                                                                                                                                  <  2:157269/271‑1 (MQ=255)
                 ttgagtaCAAACTTATATTGTTGGACTACAATTTAGATGACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACGGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGTGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:227079/272‑1 (MQ=255)
                 tGTAGTACAAACTGATTTTGTTTTTCTAAAATTTAGATCACAAAAAGAACAATGAATAAAAAAATGACATGCGGCGGGGAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGTGTTAGCTACTCGGTTAAAGGATTAATAATGAAGTTAAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCTAACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:160761/275‑1 (MQ=255)
                  taaaataacaCTTATATTGTTGTACTACAATAGAGATCACAAAAAGAACAAGGCATAAAAAAATGACATGCGTCGTGCAGAAATCTTAAAAGGAATATCAGGCGCGAAACAGGAGGGAAAGAAGAGGATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCAATGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:208203/265‑1 (MQ=255)
                      taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGtt                                                                                                                                                                                                                                                        >  1:10449/1‑275 (MQ=255)
                                     ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGTTTTGCTTTAACGAAAAGGGTAGTTCAGGAAAGTATCAAt                                                                                                                                                                                                                                         >  1:94553/1‑275 (MQ=255)
                                       gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTGCCATACAGCAAAGGTTAGTTCAGGAAAGTATCAATc                                                                                                                                                                                                                                        >  1:163080/1‑274 (MQ=255)
                                       gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTTACCACAAAGGGCAGTTCAGGAAAGTATCAATCg                                                                                                                                                                                                                                       >  1:226918/1‑275 (MQ=255)
                                             cAATTTAAATAACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCATAAATCTGAAAAGGGTTATCAGGCGCTAAACAGGAGGGAAAGAAGAGGATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCa                                                                                                                                                                                                                                 <  2:38604/275‑1 (MQ=255)
                                                  tAGAACACAAAAAAAACAATGCATAAAAAAATGACAGGCGTCGGGAAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGacac                                                                                                                                                                                                                            <  2:176142/275‑1 (MQ=255)
                                                       cacaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTCCCTTAACGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCa                                                                                                                                                                                                                       >  1:210281/1‑275 (MQ=255)
                                                       cacaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCCACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTACGGCTGCCGGTTTATTCCCACTGGCGTGGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCa                                                                                                                                                                                                                       <  2:233024/275‑1 (MQ=255)
                                                          aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTGCTATACAGAAAAGTGTAGTTCAGGAAAGTATCAATCGCAGTCATACACCATCACTg                                                                                                                                                                                                                    >  1:123624/1‑275 (MQ=255)
                                                          aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACTAGTTCAGGAAAGTATCAATTGCAGTCAGACACCaaccatg                                                                                                                                                                                                                    >  1:212577/1‑269 (MQ=255)
                                                          aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTCCTTTAACAAAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCATACACCATCAATg                                                                                                                                                                                                                    >  1:223337/1‑275 (MQ=255)
                                                                                                  aaaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTCGTTTGCCTTAACGCAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTCTCGCAGGCAAAATGTAGTAATGTAACAAAAGGCTa                                                                                                                                                                            >  1:106991/1‑275 (MQ=255)
                                                                                                               gATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAACAAAAAAAGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGCGCTATCGCAGGCAAACACTAGTAATGGAACAAAAGGCCAACTTTTTCTAggg                                                                                                                                                               >  1:226534/1‑275 (MQ=255)
                                                                                                                        cgcTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCaa                                                                                                                                                                                                                                                                 >  1:62032/1‑168 (MQ=255)
                                                                                                                            aaaCAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:62031/168‑1 (MQ=255)
                                                                                                                             aaCAGGAAGGAAAGAAGATTATGCTTTCAACGGCTTAGCTAATCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATGTTTTAAGGCTGCCGGTTTAATCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGAt                                                                                                                                                   <  2:94552/273‑1 (MQ=255)
                                                                                                                                  gaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCCGGCAAAAGATAGCAATGGAACAAAAGGAAAAGGCTTCGGAGGGGAATCGCTGGATTACCtac                                                                                                                                            >  1:96393/1‑273 (MQ=255)
                                                                                                                                       aaaGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGTAGATCAGGAAAATATAAATCGCAGTCCGACACCATCACTGGGCTATCGCAGCAAGAAGAATGTACTGGAACAAAAAGCTATGCTTTTGTAGGGGATTCGATTGATTACCTTATCACt                                                                                                                                       >  1:85961/1‑275 (MQ=255)
                                                                                                                                           aataggttGCTTTCAACGGCTTAGCTACTTGTTTAAAGGAGTAATCAGGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCTGTTTATTCCCACTGGGGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATg                                                                                                                                   <  2:106990/268‑1 (MQ=255)
                                                                                                                                                             gCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTa                                                                                                                 <  2:10449/275‑1 (MQ=255)
                                                                                                                                                               ttAGATGCTCGTTTGAAGGATTAGTCATGCATATGAATTTTACTAGAGTTTTTAAAGCTGCCGTTTTATTACCACTGGCGACGATGCTTTCAGGCTGTATAACTGAAGCGTTGGTTTCGCAGACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCAACACTGAGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCGTATCACTGTTGGTGCCGATGGCATCGTTAAg                                                                                                               <  2:226917/275‑1 (MQ=255)
                                                                                                                                                                 aGCTACTCGTTTAAAGGATTAATCATGTAGTTGACTTTTAAGGGATTTTTTAAGGCTTCCGGTTTATTCCCACTGGCGAGGATGCTTTCAGGCGGTATCTCGTATGCTCTGGTGTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGTCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGTGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGAt                                                                                                             <  2:198989/275‑1 (MQ=255)
                                                                                                                                                                      cTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTTCTTGACCAAAAAAAGTAGTTCAGGAAAGTATCAATAGCAGTCAGACACAATCACTGGGCTATCGCAGGCAAAAGATAGAAATGGAAAAAAAGGCCATGTTTTTGTAGGGGACTGGCTGTATCACCTTATCACTGATTGTGCCGAGGACATCGTTAAGATGCTCa                                                                                                        >  1:112176/1‑275 (MQ=255)
                                                                                                                                                                       tCGTTTAAAGGGTTTATCTGGCAGGTGAGTTTTAAGTGAGTTTTTAAGGATTCCGGTGTATTACTGCTGGAGATGAGGCTATCATGCTGTAGAAACGTTGGTCTGGTTTCCAATACCGCAAAGGGTAGTTCAGGAAAGTATCAATAGCAGTCAGACACCATCACTGGGCTATAGCAGCCAAAAGATAGTAATGGAATAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGGGCGGATGACCTCGTTAAGATTCTCaa                                                                                                       <  2:109704/275‑1 (MQ=255)
                                                                                                                                                                        cGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTAt                                                                                                                                                                                                                                             >  1:120652/1‑140 (MQ=255)
                                                                                                                                                                            tAAAGGATTAATCATGAAGTGGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAAt                                                                                                                                                                                                                                         <  2:120651/140‑1 (MQ=255)
                                                                                                                                                                                           gAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTTACAGAAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGCTAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGAAGGTTCCCATGACATCGTTAAGATGCGCAATGATCCAGCACTTAACCGGc                                                                                   >  1:66456/1‑275 (MQ=255)
                                                                                                                                                                                           gAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTCGTTTGCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTAACTTATCACTGATGGTGCCGATGACATCGTTAAGATTCTCAATGATCCAGCCCTTAATCGGc                                                                                   >  1:123312/1‑275 (MQ=255)
                                                                                                                                                                                                                 ttttAGGGTGCCGGTTTATTCCCACTGGCTCTGATGCTTTCCGGCGGTATCTCGTATGCTTTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATAGAAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGATATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGAAATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGa                                                             <  2:223336/275‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttCAGGCTGTATCTCGTATGCCGTCGTTTGCTATACCACAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGCTGCTCAATGATCAAGCACTTAACCGGCAAAATATTCCGGTTGCCGATGACGCAAGACTTGTTTTAATTGCGGGGAAAAAGAAAttt                        >  1:139846/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                     tcGTATGCCCTGGTTTCCCATACCGCAACGGGCAGTTAAGGAAAGAATCAATCGCATGTAGACACCATACAAGTGCTAACGAAGCCAAAAGATAGTAATGGAAAAAAAGGCTATGTTGTTGTGGGGGAATCGCTGAATTACATTATCACTGATGGTGCCTAGGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGTCAATATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAATAAGAAATTTACCGGCACAatat           <  2:210280/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGc        >  2:219268/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                       gTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATAGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAACTGCGGGGAAAAAGAAATTTACCGGAACCATATcct        >  2:206891/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                             tctGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAAGCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCCCAATATCTCTTtaca  >  2:95050/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                 
GTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875253‑3875795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: