New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078059 (0.160)43 (0.890) 39/252 0.2 86.0% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 6 (0.120)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 104 total aligned reads displayed.

GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947
                                                                                                                                             |                                                                                                                                              
gttccgtggtacatcggtgttctggtcatttttggatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgctggttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                               >  2:977269‑M1/127‑143 (MQ=255)
 ttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                              >  1:427237‑M1/126‑143 (MQ=255)
   ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGCTTGGGAGAAGGggca                                                                                                                                            >  1:534494‑M1/1‑139 (MQ=255)
    cAGCCTGGAGAAGGGGCGGCACGACCAGTTCCTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAACGctctc                                                                                                                                           >  2:833877‑M1/1‑138 (MQ=255)
      ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtgaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGTGTTGGGAGAAGGAGCcaaa                                                                                                                                         <  1:824352‑M1/23‑1 (MQ=255)
        gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTCGGGAGAAGGAGCAACACt                                                                                                                                       <  2:529768‑M1/25‑1 (MQ=255)
        cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCCAACGGCTCTCGACAACCTTGCTTTGGGATAAGGTGCAAAACt                                                                                                                                       >  1:251839/1‑143 (MQ=18)
         tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                      >  1:987244‑M1/1‑133 (MQ=255)
         gggggaagggGCGGCACGACCAGCGGCGTACCGGAGTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                      <  2:988854‑M1/139‑11 (MQ=255)
          ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                                     <  2:680544‑M1/143‑12 (MQ=255)
           gagcAGGGCCGGCCGGACCAGTTAATTACCGCACTTCGCGCGCTGCTGTTAAGCGGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                    <  2:568848/143‑1 (MQ=18)
            gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccattgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   >  1:49361‑M1/115‑143 (MQ=255)
            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACtcatt                                                                                                                                   <  1:103244‑M1/29‑3 (MQ=255)
            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatcccccgggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   >  1:145669‑M1/115‑143 (MQ=255)
              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                                 >  1:307740‑M1/1‑128 (MQ=255)
               tgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                >  1:307146‑M1/112‑143 (MQ=255)
               tgtggtctggtcatgtggtgatacgcgtacatagccaataagcatgttaaatcctcctggtaaaagcaggaaggatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                >  2:617423‑M1/112‑143 (MQ=255)
                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtcacagcaggaatgatgccatttgcttgtcatttcttcattttcataaacgTTGGCTTGGGAGAAGGAGCAACACTCAATGCAGCaa                                                                                                                            <  2:2652‑M1/36‑1 (MQ=255)
                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatcatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAACCTCCATGCAGCaa                                                                                                                            <  2:139179‑M1/36‑1 (MQ=255)
                        gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGACAAGGAGCAACACTCAATGCAGCAACGGCt                                                                                                                       <  1:664430‑M1/41‑1 (MQ=255)
                        aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCCACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctccatcacctgttggtgtcccg                                                                                                                       >  2:769814‑M1/1‑118 (MQ=255)
                        aCGACAAGTCAGTTACCGCACCACGAGCGCTGCTGATAAGCCGAAAGACTACGTCTGGCGATATCAAATCGGATGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                       <  1:421859‑M1/143‑26 (MQ=255)
                         tcatttgttgatacgcgtacatagccaataagcatggtaaagccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGCAGGAGCAAAATTCAGTGCAGCAACggcga                                                                                                                      <  1:436013‑M1/42‑3 (MQ=255)
                         cGACCGGGTACTGACCGCCCTTCGCGCGCTGCTGTTAAGCCGCAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                                      <  2:883509‑M1/143‑27 (MQ=255)
                              tgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggagtgatgccatttgcttgttatttcttcatgttcataaacgGTGGTTTGGGAGAAGGAGCTAAGCTCCATGCAGCACCGgctactttt                                                                                                                 <  1:124573‑M1/47‑5 (MQ=255)
                               ccttcccaccgcacttCGCGCGCGGCTGTTAAGCCCCAACAATCCGTTTGGCCATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGTTTGGGAGAAGCctctgcattacctgttggtgtcccggttccgt                                                                                                                <  2:8047‑M1/136‑33 (MQ=255)
                                ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                               >  2:627292‑M1/95‑143 (MQ=255)
                                ttacttccCGCACTTCGCGCGCTGCTGTTCAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                               <  2:618827‑M1/143‑34 (MQ=255)
                                ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                               >  1:959924‑M1/1‑110 (MQ=255)
                                  gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGGCCATAGCTCAATGCAGCAACGGCTACATTAGGAc                                                                                                             <  1:266049‑M1/51‑1 (MQ=255)
                                   atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                                            <  2:376353‑M1/52‑1 (MQ=255)
                                    ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct                                                                                                           >  2:867606‑M1/1‑106 (MQ=255)
                                      cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATTCAGCAACGGCTACATTAGGACGCAc                                                                                                         <  2:505073‑M1/55‑1 (MQ=255)
                                       gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCGCAACACTCAATGAAGCAACGCCTAAAATAGGACGCAcc                                                                                                        <  2:898805‑M1/56‑1 (MQ=255)
                                         gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACCGCTCTCGAAAACCCGGGTGTGGGAGAAGGctctgcattacctgttagtgtcccggtgccgtggcctgcagc                                                                                                      >  2:896828‑M1/1‑101 (MQ=255)
                                          cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                     <  1:466773/143‑1 (MQ=255)
                                            cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccac                                                                                                   <  1:413039‑M1/143‑46 (MQ=255)
                                             atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  >  2:667718‑M1/82‑143 (MQ=255)
                                             atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  <  1:889467‑M1/62‑1 (MQ=255)
                                                 ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCACAACTCAATGCAGCAACGGCTACGTTAGGACGCACCGGTTTCATAg                                                                                              <  2:372898‑M1/66‑1 (MQ=255)
                                                   aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttgttcattttcataaacgTTGGTTTGAGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGAACCGGCTTCAtaggt                                                                                            <  2:490194‑M1/68‑3 (MQ=255)
                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctcgagccactccgccagca                                                                                         >  2:922524‑M1/1‑88 (MQ=255)
                                                      tgctgTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                                                                                         <  2:745298‑M1/143‑56 (MQ=255)
                                                         tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc                                                                                      >  2:452069‑M1/1‑85 (MQ=255)
                                                         tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcattccctgttcgtgtcccggttccgtggccttcagccaccccgccaaccacc                                                                                      >  1:932310‑M1/1‑85 (MQ=255)
                                                          gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCCTAGCTATACCgg                                                                                     >  1:815921/1‑143 (MQ=255)
                                                          gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGCATGGCACTGTGCAAACGGCTATCGAAAACCTTGGCTTCGGAGAAGGctctgcattacctgctggtgtcccggttccgtcgccttcagccactcacccaacacgct                                                                                     >  2:121636‑M1/1‑84 (MQ=255)
                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                     <  1:345339‑M1/75‑1 (MQ=255)
                                                           tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtatacgggg                                                                                    <  1:909790‑M1/76‑5 (MQ=255)
                                                           cgttaaatcccccgggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTCTAACGGt                                                                                    >  2:489163‑M1/68‑143 (MQ=255)
                                                            tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                   <  2:781017‑M1/143‑62 (MQ=255)
                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                               >  1:559209/1‑143 (MQ=255)
                                                                aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                               >  1:187379‑M1/63‑143 (MQ=255)
                                                                   cctcctggtaaagtcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                            >  2:58829‑M1/60‑143 (MQ=255)
                                                                   ccccctggtaaaagcaggaatgatgccacttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTCATGATtg                                                                            >  1:768802‑M1/60‑143 (MQ=255)
                                                                   cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGCTTGGGAGAAGGctctgcattacctgtaggtgtcccggttccgtggccttcagccactccgcccacaggctggctgacat                                                                            >  2:282272‑M1/1‑75 (MQ=255)
                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAGGGAGCAAAACTCAATGCAGCAACGGCTACGTTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTtggt                                                                          <  2:644503‑M1/86‑1 (MQ=255)
                                                                     aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctggcatgc                                                                          >  1:148860‑M1/1‑73 (MQ=255)
                                                                         tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcaggatggaaggcaatt                                                                      >  2:692110‑M1/1‑69 (MQ=255)
                                                                             aaaggaggaatggtgccatttgcttgttatttcttcattgtcatgaacgTTGGTTTGGGAGAAGGAGCAAGGCTCAATGCAGCAACGGCGACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                  >  2:88121‑M1/50‑143 (MQ=255)
                                                                                 gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGActctgcattacctgttggtgtcccggttccgtggctttcagccactccgccaacaggctggcagaaatgcactggcggagca                                                              >  2:335811‑M1/1‑61 (MQ=255)
                                                                                   gATATCAACTCGGATGGCACTGTGCAGACGGCTCTCGTCAACCTTGGTTTGGGAGAAGGctctgcactacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                            <  2:528116‑M1/143‑85 (MQ=255)
                                                                                   gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACATTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgtccttcagccactccgccaacaggctggctgtaatgcaatggtgccgattt                                                            >  1:302775‑M1/1‑59 (MQ=255)
                                                                                    gaatgatgccatttgcttgttatttcttttttttcataaacgATGGATAGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                           >  1:275892‑M1/43‑143 (MQ=255)
                                                                                    aaatgatgccattggcttggtatttcttcactttcataaacgTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATATCGGTTATGATTGGTGGTATTGAGCAATCa                                                           >  2:521475‑M1/43‑143 (MQ=255)
                                                                                      atCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                                         <  2:46131‑M1/143‑88 (MQ=255)
                                                                                        cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg                                                       >  1:485563‑M1/1‑54 (MQ=255)
                                                                                        cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctcgctgaaatgcaatggtgccgctttttctg                                                       >  2:964680‑M1/1‑54 (MQ=255)
                                                                                         aactCGGACGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                                      <  1:858530/140‑1 (MQ=255)
                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgc                                                      <  1:452069‑M1/143‑91 (MQ=255)
                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAACTCCTGGTTGGGGAGAAGGctctgcattacctgttggggtccccgctccgtggccctcagccactccgccaacaggctggctgaaatgcaacggtgccgctgtttctgcg                                                     >  2:753135‑M1/1‑52 (MQ=255)
                                                                                            tccgctGGCCCTGTGCAAACGGCTCTCGAAGACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                   <  1:313903/138‑1 (MQ=255)
                                                                                             cagttgtttgttatttcttcattttcataaacgTTGGTTGGGGAGAAGGAGCAAACCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                  >  2:327361‑M1/34‑143 (MQ=255)
                                                                                             cGGATGGCACTGTGCAACCGGTTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                  <  2:807904‑M1/143‑95 (MQ=255)
                                                                                             cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                  <  1:729847‑M1/143‑95 (MQ=255)
                                                                                               gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCGGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTcc                                                >  2:632271/1‑142 (MQ=255)
                                                                                                   tttgttattttttcaatttcataaaagTTGGTGTGGGAGAAAGATCAAAACTCACTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                            >  1:769611‑M1/28‑143 (MQ=255)
                                                                                                   cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                            >  2:889467‑M1/28‑143 (MQ=255)
                                                                                                    ttgttattgcttcattctcataaacgTGGGTTTGGGAGGAGGAGCAAATCGTATTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                           >  2:646636‑M1/27‑143 (MQ=255)
                                                                                                     aCTGTGCCAACGGCTCTCGAGTACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtcgccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                          <  2:776022‑M1/143‑103 (MQ=255)
                                                                                                       ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                        <  2:569931‑M1/120‑1 (MQ=255)
                                                                                                       ttatttcttcattttcagaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                        >  2:991383‑M1/24‑143 (MQ=255)
                                                                                                         tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                      <  1:194170‑M1/143‑107 (MQ=255)
                                                                                                         atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                      >  1:840801‑M1/22‑143 (MQ=255)
                                                                                                            aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                   >  1:199260‑M1/1‑34 (MQ=255)
                                                                                                              ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGGGGGTGGAATGc                                 <  1:5016‑M1/127‑1 (MQ=255)
                                                                                                               tcattttcataatcgTTGGTTTGGGAGAAGGAGCAATACTCAATGTAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                >  2:563300‑M1/16‑143 (MQ=255)
                                                                                                                ggCTCTCGAAAACCTTGGTTTAGGAAAAGActctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagtctggctgaaatgcaatggtaccgcttttactgccgaagactacacggcacaggccc                               >  2:674622‑M1/1‑30 (MQ=255)
                                                                                                                 gCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgaaatggtgcagctttttctactgaagaatacccggaactggcaaa                              <  1:234026‑M1/143‑115 (MQ=255)
                                                                                                                 attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                              >  1:376353‑M1/14‑143 (MQ=255)
                                                                                                                     tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCTGTAAGCAGTCAGTGGGGGTGGAATGCCGCaaaa                          >  2:813512‑M1/10‑143 (MQ=255)
                                                                                                                             cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactggcaaaggcttatccgac                  >  1:2336‑M1/1‑17 (MQ=255)
                                                                                                                              ttGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca                 <  2:767935‑M1/143‑128 (MQ=255)
                                                                                                                                ggTTTGGGAGAAGGctctgctttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttcagctgaagaatacccggaactggcaaaggcttatccgacaaa               <  1:779430‑M1/143‑130 (MQ=255)
                                                                                                                                ggTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaa               <  1:833877‑M1/143‑130 (MQ=255)
                                                                                                                                   TTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTATgg            <  1:804335‑M1/143‑1 (MQ=255)
                                                                                                                                      GGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCATCGGTTTTGTAGCTATACCGGTTATGAATGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggg         >  1:885587‑M1/1‑143 (MQ=255)
                                                                                                                                        agaagaAGCAAAACTCAATGCAGCAACGGCTACATAAGGACGCACAGGTTACATAAGTATAACGGACATGATTGGTGATATTGAGCAATCAGTAATCATTAAGTAGGGGGGGAATGCAGCAAAAGCACCGGCATCCgggaggg       >  2:107660/1‑143 (MQ=255)
                                                                                                                                        agaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc       <  1:155684‑M1/143‑138 (MQ=255)
                                                                                                                                             GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGa  <  1:842764‑M1/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207664‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.