| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3423665 = | NA (NA) | 10 (0.140) | 5/278 | 10.3 | 13.2% | intergenic (‑10/+3) | thrV/rrfD | tRNA‑Thr/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | = 4040683 | 67 (0.920) | intergenic (+47/+223) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA > NC_000913/3423523‑3423802 | cgcgCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAGAtt > 1:1186109/1‑143 (MQ=255)cgcgCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAtt > 1:1186505/1‑143 (MQ=255) gcgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAttt < 1:456533/143‑1 (MQ=255) cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTGTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTg < 1:555785/143‑1 (MQ=255) tACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTGGCCATTGCCAAAGGTGCGCTCTCCCAACTGAGCCATATCAGCACGCTAAATTTGATg > 1:1307693/1‑143 (MQ=255) aCTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGc > 1:626113/1‑143 (MQ=255) gccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg < 2:163769/143‑1 (MQ=255) gacgccAGGCAGAGTCGTCTCTAACCTGCCGAACGTTAACCTAACTAGTGGCGCTGATACCCAGTGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg < 2:702071/141‑1 (MQ=21) aacAGATAAACTCTCTTCCAATCTGCCGAACTGTAACCGAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATCTGATGCCTGGCa < 2:682565/141‑1 (MQ=25) aGACAAATTCTTTTCTAATCTGCAGAACTTTAACCTAAAAAGTGGGGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGtt < 1:335826/143‑1 (MQ=255) aCAAATTCTTTTCTACTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTcc < 1:478590/143‑1 (MQ=255) aCAAATTCTTTTCTAATGTGTCGAACTTCAACCTAACGAGTGGTGCTGATACGCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTcc < 2:752819/143‑1 (MQ=25) aCAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTcc < 2:173361/143‑1 (MQ=255) aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCt < 1:803503/143‑1 (MQ=255) aaTTCTTTTCTAATCTGCCGAACTTTCACCTAAAAAGTGGTTCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCCCTCCCAACTCAGCCCTAACAGCCAGCTAACTTCGATGCCTGCCAGTTCCCTa > 2:468249/1‑143 (MQ=25) aTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGCGCGCTCTACCAACTGAGCACGCTCACCACGCTAAATTTGCTGCTCGGCAGTTCCCTaa > 2:577970/1‑142 (MQ=255) tCTTTCCTACTCGCCCGAACTGTCACCTACAACGTGGTGCTGATCCCCAGAGTCGAACTGGGGACCTCACCCTCACCAAGAGTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTActc < 2:1215914/143‑1 (MQ=255) ttttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACtctc > 1:758256/1‑143 (MQ=255) caTCTGCTGAACTTTACCCCCACAAGTGGTGCTGATACCCCGAGTCGAACTCGCGACCTCACCCTTACCAATGGTTCGTTCTACCAACTGAGCCATATCAGCACGTTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg < 2:838336/142‑1 (MQ=37) aaTCTGCCGAACTTTAAACTCAAAAGGGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg < 1:1214818/143‑1 (MQ=255) aaTCTGCCAGACTTTCACCGTCTAAGTGGCGCTGATACCCAGAGTCGATCTGGGGATCTCACCATTACTAAGGGTGCGCTCTACCTACTGAGACATATCATCACGTTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg < 2:4857/143‑1 (MQ=25) agcggCCGAACTTTAACCCCAAGTGTGGTGCTGACACCCGGAGGCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCACCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg < 1:97421/139‑1 (MQ=37) ccGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGGGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCCACTCTCCCATCGGCAGAc > 1:360007/1‑143 (MQ=37) cGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCAGGCTAAATTTGATGCCTGGCGGTTGCCTACTCTCGCCTggggcggcc > 1:135902/1‑138 (MQ=37) aCTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATCTCAGCACGCTAAATGTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACACca > 1:214608/1‑143 (MQ=255) ttAACCTAAGAAGGGGTGCTGAGACCGAGAGTCGAACTGGGGACCTCACCCGTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCCCAAGATGACGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac < 2:1288825/143‑1 (MQ=25) cTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCGACTGAGCCATATCAGCACGCTAAATTTGATGCCTGCCCGTCCCCTACTCTCGCTTGGGGAGACCCCCCGCTAccg > 1:398715/1‑142 (MQ=25) cTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACAAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGCCACCACACTAccg > 1:594440/1‑142 (MQ=255) gtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTAc > 1:445594/1‑143 (MQ=255) gCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg > 2:815734/1‑143 (MQ=255) ctcaTACCCAGAGTCGAGCTCGCCACCTCACCCTTACCAAGCGTGCGCTCCACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc < 1:1043001/140‑1 (MQ=25) cTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCAAGCTAAATTTGATGCCTGGTAGTTCCCTACTCTCGCATGGGGAGACACCACACTACCATCGGCGCTACGGc > 1:395134/1‑143 (MQ=255) cTGAAACCCAGAGTCAAACAGGGGACCTCGCCCTTACCATGGATGCGCTCTACCAACTGATCCATATCCGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc < 1:91485/143‑1 (MQ=21) aTACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAGTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCggc > 1:507644/1‑141 (MQ=255) tACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt < 1:245239/143‑1 (MQ=255) tACCCAGAGGCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt < 1:1305803/143‑1 (MQ=255) ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGGTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCCTGGGGAGACCGCACACTACCATCGGCGCTACGGCGTTTCAc > 2:244012/1‑143 (MQ=255) ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCAGGCAGTTCCCTACTCTCGCATGGGGGGACACCACACTACAATCGGCGCTACGAAGTATCAc > 2:1056937/1‑143 (MQ=37) ggagTCGATCTGATGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt < 2:1199357/142‑1 (MQ=255) gTCGAACTGGCGACCTCACCCTTCCCAAGGGTGCGCTCTACCAACTGATCCATATCAGCACGCTAAATTTCATGCCTGGCAGTCCCCGACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg < 2:1261662/143‑1 (MQ=25) gcGAACTGGGGCCCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCAGAGCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACCCTCGCATGGGGAGACCCCACACTCCCATCGGCGCTACGGCGTTTCACTTCTGa < 1:940042/142‑1 (MQ=21) ggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAGTTGGTGCCTGGCAGTTCCCTACTCTCGCATGGGGGGACCCCACCCTACCATCGGCGCGACGCCGTGTCGCTTCTGCGTTGGGCAt > 2:1178316/1‑143 (MQ=21) gACATCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCACATCAGCACGCTACGTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTCTCACTTCTGAGGTCGGCacg > 2:1150624/1‑141 (MQ=21) agcTCACCCTTACCACGGGTGCGCGCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg < 2:1162241/141‑1 (MQ=255) cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACCACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCATggcg > 2:79201/1‑141 (MQ=255) aCCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCCGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTCTCACTTCTGAGTTCGGCCTGGGGTcc > 1:272603/1‑142 (MQ=255) ccTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAgg > 1:1151424/1‑143 (MQ=255) ttACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAGGGGGCCAGGTg > 2:1242706/1‑143 (MQ=255) tACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg < 1:681396/143‑1 (MQ=255) tctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTAc > 1:989706/1‑143 (MQ=255) ccAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTCCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGCTGGGACCCCCGCGCCACGccc > 2:111828/1‑143 (MQ=17) cAACTGAGCCATATCAGCACTCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGGTCGGCATGGGGTCAGGTGGGACCACGGCGGTATGgccg > 1:1137299/1‑143 (MQ=14) aCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgcc > 1:626680/1‑143 (MQ=255) aCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgcc > 1:1142298/1‑143 (MQ=255) aGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGAGGAGACCCCAGACTACCAACGGCGCTACGGATTTTCACTTCTGAGTCCGGCATGGGGACAGGTGGGAACACCGCGCCACGACCGCCAGGc > 2:288961/1‑143 (MQ=14) ccttttgCTATATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCGCTTCTGAGTTCGGCATGGGGTCAGGTGGGCCCACCGCGCTACGGCCGCCAGGCAAATTCTg < 2:801515/137‑1 (MQ=11) cAGCACGCTAACTTTGACGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg < 2:626113/143‑1 (MQ=255) cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATc > 2:1025689/1‑143 (MQ=32) tAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCCAATTCTGTTTTCTCa > 1:1135160/1‑143 (MQ=14) tAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTGTTGTcg > 2:961098/1‑142 (MQ=14) | CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA > NC_000913/3423523‑3423802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |