New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4606558 =	NA (NA)	3 (0.060)	3/270	7.9	NA	noncoding (1/92 nt)	REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913	4606590 =	NA (NA)					noncoding (33/92 nt)	REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACAAAACCTGCACGTTAGCCCTTCGTAGGCCAGATAAGACGCGCCAGCGTCGCATCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4606705‑4606558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCG  >  NC_000913/4606590‑4606730                                                                                                                                                                                                                                                                                                   TCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACAAAACCTGCACGTTAGCCCTTCGTAGGCCAGATAAGACGCGCCAGCGTCGCAT                                                                                                                                                    <  1:67592/143‑1   GCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTAGCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCGTATCCGACCTACAAAACCTGCACGTTAGCCCTTCGTAGGCCAGATAAGACGCGCCAGCGTCGCATCT                                                                                                                                                  <  2:119748/143‑1           ATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACAAAACCTGCACGTTAGCCCTTCGTAGGCCAGATAAGACGCGCCAGCGTCGCATCTGGCCTctg                                                                                                                                          >  1:577522/1‑140                                                                                                              TTCGTAGGCCAGATAAGACGCGCCAGCGTCGCATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTACCCTGGAGGGTC                                       >  2:882974/1‑143                                                                                                                CGTAGGCCAGATAAGACGCGCCAGCGTCGCATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGTATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGAGAGATAATTAAGCTTTCTTCGCCTGGCGcgatac                                     >  2:506567/1‑137                                                                                                                                                   GCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCG  >  2:942974/1‑143                                                                                                                                                   GCCTACGAAGGCCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCG  <  1:35742/143‑1                                                                                                                                                                                                                                                                                                   TCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACAAAACCTGCACGTTAGCCCTTCGTAGGCCAGATAAGACGCGCCAGCGTCGCATCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4606705‑4606558 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCG  >  NC_000913/4606590‑4606730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.