New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3391362115 (1.220)3 (0.030) 3/506 9.8 2.7% coding (667/1446 nt) tldD putative peptidase
?NC_000913 3391501 = 102 (1.110)coding (528/1446 nt) tldD putative peptidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCTTCGTCATCAATCGCCACCGAACCTCGGCGATCGACCATCGTGCCATCATCAACCACGGTACACAGTTCTGAAGCCACCAGCTCCCCGACCTGTCCACTAAATACTGAAGTGCCACGGCGGTTGAAGTCGCCTTCCAGACCGTGACCAACCGCTTCATGCAACAGCACGCCCGGCCAACCTGCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCAGAAAGATTGACCAGCGCCATACGCACTGCTTCTTTTGCCCATGCATCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3391085‑3391362
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccgcCGCTAGCGTGCCGTCGGTGGCCGCAACCAAAATTAATTCATAGACACCACTGAGGCTGGCAGTCACTTCCTGTACGCGCTTGTCCGCTTCGCGGGCAACCTTATCGACGCGACGCAGGATATCCAGCTTCTCTTCACGGCTCATGCTTTGCAGCGGATCTACCGAGGTATACAACGGGCTATGCTCTACCGCGCCCAGCGTCTGTACTTTACCATCACCACTATCACGGACGATGGTGCGCGCCGCTTGCGCACTCTGTTCCAGCGCCAGCA  >  NC_000913/3391501‑3391772
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
CCTGCGTCAGCCATCGCCACCGAACCGCGGCGATCGACCATCGTGCCATCATCAACCACGGTACAAAGTGCTGAAGCCACCAGCTCCCCGACCTGTCCACTAAATACTGAAGTGCCACGGCGGGTGAAGTCGCCTTCCAGACCGTGACCAACCGCTTCAGGCAACAGCACGCCCGGCCAACCTGCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCAGAAAGATTGACCAGCGCCATACGCACTGCTTCTTTTGCCCATGCAT                                                                                                                                                                                                                                                                                      <  1:138969/274‑1
     GTCATCAATCGCCACCGAACCTCGGCGATCGACCATCGTGCCATCATCAACCACGGTACACAGTTCTGAAGCCACCAGCTCCCCGACCTGTCCACTAAATACTGAAGTGCCACGGCGGTTGAAGTCGCCTTCCAGACCGTGACCAACCGCTTCATGCAACAGCACGCCCGGCCAACCTGCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCCGAAAGATTGACCAGCGCCATACGCACGGCTTCTTTTGCCAATGCCACCGCC                                                                                                                                                                                                                                                                                 >  1:510190/1‑274
                                                                                        CGACCTGTCCACTAAATACTGAAGTGCCACGGCGGTTGAAGTCGCCTTCCAGACCGTGACCAACCGCTTCATGCAACAGCACGCCCGGCCAACCTGCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCCGAAAGATTGACCAGCGCCATACGCACTGCTTCTTTTGCCCATGCATCCGCCGCTAGCGTGCCGTCGGTGGCCGCAACCAAAATTAATTCATAGACACCACTGCGGCTGGCAGTCACTTCCTGTACGCGCTTGTC                                                                                                                                                                                              >  2:550067/1‑274
                                                                                                                                                                                       GCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCAGAAAGATTGACCAGCGCCATACGCACTGCTTCTTTTGCCCATGCATCCGCCGCTAGCGTGCCGTCGGTGGCCGCAACCAAAATTAATTCATAGACACCACTGAGGCTGGCAGTCACTTCCTGTACGCGCTTGTCCGCTTCGCGGGCAACCTTATCGACGCGACGCAGGATATCCAGCTTCTCTTCACGGCTCATGCTTTGCAGCGGATCTACCGAGGTATACAACGGGCT                                                                                              <  1:550068/275‑1
                                                                                                                                                                                                                                                                                   CGCCGCTGGGGGGCCGTCGGGGGCCGCAACCAAAATTAATTCCAAGACACCCCTGAGGCTGGCAGTCACTTCCTGTACGCGCTTGTCCGCTTCGCGGGCAACCTTATCGACGCGACGCAGGATATCCAGCTTCTCTTCACGGCTCATGCTTTGCAGCGGATCTACCGAGGTATACAACGGGCTATGCTCTACCGCGCCCAGCGTCTGTACTTTACCATCACCACTATCACGGACGATGGTGCGCGCCGCTTGCGCACTCTGTTCCAGCGCCAGCA  <  2:876341/275‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
CCTTCGTCATCAATCGCCACCGAACCTCGGCGATCGACCATCGTGCCATCATCAACCACGGTACACAGTTCTGAAGCCACCAGCTCCCCGACCTGTCCACTAAATACTGAAGTGCCACGGCGGTTGAAGTCGCCTTCCAGACCGTGACCAACCGCTTCATGCAACAGCACGCCCGGCCAACCTGCGCCAAGTACTACCGGCATGGTGCCCGCTGGTGCAGCAACGGCAGAAAGATTGACCAGCGCCATACGCACTGCTTCTTTTGCCCATGCATCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3391085‑3391362
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccgcCGCTAGCGTGCCGTCGGTGGCCGCAACCAAAATTAATTCATAGACACCACTGAGGCTGGCAGTCACTTCCTGTACGCGCTTGTCCGCTTCGCGGGCAACCTTATCGACGCGACGCAGGATATCCAGCTTCTCTTCACGGCTCATGCTTTGCAGCGGATCTACCGAGGTATACAACGGGCTATGCTCTACCGCGCCCAGCGTCTGTACTTTACCATCACCACTATCACGGACGATGGTGCGCGCCGCTTGCGCACTCTGTTCCAGCGCCAGCA  >  NC_000913/3391501‑3391772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.