Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,491,904 IS186 (+) +3 bp intergenic (+54/+16) ydcA → / ← hokB putative periplasmic protein/toxic polypeptide, small

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 609351NA (NA)40 (0.860) 35/274 0.3 100% noncoding (1345/1345 nt) IS186 repeat region
?NC_000913 1491904 = 0 (0.000)intergenic (+54/+18) ydcA/hokB putative periplasmic protein/toxic polypeptide, small
* ? NC_000913 = 14919060 (0.000)56 (1.200) 53/274 0.0 100% intergenic (+56/+16) ydcA/hokB putative periplasmic protein/toxic polypeptide, small
?NC_000913 2514273 = NA (NA)noncoding (1/1345 nt) IS186 repeat region

ATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609206‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG  >  NC_000913/1491904‑1492041
                                                                                                                                                                                                                                                                                             
ATCTGGAGTTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG                                                                                                                                                <  1:74707/143‑1
 TCTGGTGCTTACAGGTGGCCATTCGTTGGACAGTATCCCTGACAGCCTGCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGCTGGCTCAACCCAGAAGTTAGCGCTTATGG                                                                                                                                               <  2:677072/143‑1
  CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGCGCCTACGGc                                                                                                                                              >  2:270250/1‑142
  CTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG                                                                                                                                              >  1:865240/1‑143
   gGGAGCTTACGGGTGGCCATCCCTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                             <  2:87219/142‑1
   TGGGGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                             <  1:711424/143‑1
   TGGAGCTTACAGGTGGCCATTCGTGGGGCAGGATCCCTGACAGCCTACAAAGCGCAATTGAAGAACGCGATGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCAACCGCAAGTACGACCCTTAAGTTAGCGCTTAGGGGA                                                                                                                                             <  2:771195/143‑1
   TGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                             <  1:682163/143‑1
   TGGAGCTTACAGGTGGCCATGCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                             <  1:127917/143‑1
        CTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGACGCACGCGCGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTGCAGCTGGTTCAACCCTTAAGGTAGCGCTTATGGGAAAcgc                                                                                                                                        >  2:690854/1‑140
                     ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGATGGTTCACCCCTTACGTTAGCGCTTATGGGACACTCCCCGCGCTTGCCC                                                                                                                           >  1:262530/1‑143
                     ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTCAGTTAGCGCCTATGCGAAAATGCCCGCGCTTACCC                                                                                                                           >  2:508391/1‑143
                          TGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGCAAATCCCCGCGCTTGCCCTTACC                                                                                                                      >  2:800615/1‑143
                             GACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACACTAAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTCCCTGG                                                                                                                   >  2:473274/1‑143
                               CAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGAC                                                                                                                 <  1:271135/143‑1
                                    TCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCA                                                                                                            <  1:432440/143‑1
                                     CCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAG                                                                                                           <  2:157425/143‑1
                                      CCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGG                                                                                                          >  1:18692/1‑143
                                        TGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGCAAAATCCGCGACCTTGCCCTTACCTGTACGTGCAGGCC                                                                                                        >  1:682767/1‑143
                                         GACAGCCCGCCATACGCAGTTGAAGACCGCGAGGCACCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCA                                                                                                       <  2:508040/143‑1
                                            AGCCGACAAAGCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGA                                                                                                    <  1:777620/143‑1
                                                 ACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTCAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCA                                                                                               <  2:720307/143‑1
                                                      ACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAAC                                                                                          <  1:694831/143‑1
                                                      ACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAAC                                                                                          <  1:108727/143‑1
                                                        GCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATCAGCGCAGCAACCT                                                                                        >  1:284066/1‑143
                                                        GCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTGCAACCCTTAAGTTAGCGCTTATGGGAAGATCCCCGCGCTTGCCCGTACCTGCACGTGCCGGCCATGAGCGCAGCAACCT                                                                                        >  1:715727/1‑143
                                                          AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCC                                                                                      >  1:435927/1‑143
                                                          AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCC                                                                                      >  1:449645/1‑143
                                                           ATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCT                                                                                     >  1:742796/1‑143
                                                                      cgtcGCATCGTCTTAGAGAGGCACCGGGGCCTCGCATTCGTCATATGCTTCAACCCTTAAGTTAGCGCTTAGGTGATTTTCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCC                                                                          <  2:530534/139‑1
                                                                        gGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGAAACTCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG                                                                        <  2:179107/142‑1
                                                                        atGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATATTCCCCTCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG                                                                        <  1:421904/141‑1
                                                                        AGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCG                                                                        >  1:368016/1‑143
                                                                         GGCATCGTCTTAACGAGGCACCGAGGCGTCGAATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCAGGACGTGCAGGCCATGAGCGAAGCAACCTCATTATAACCGTCCCGa                                                                       >  2:331600/1‑142
                                                                             TCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTGCCGTGGACACGCAGGCAATGAGCGCAGCAACCTCCTTATCACCGTCCCGGcccc                                                                   >  2:347559/1‑139
                                                                                       GAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGCGCGCAGCGACCGCCTTATGACCGTGCCGGGACCGCAGTGCGag                                                        >  1:298237/1‑141
                                                                                               caaGCGTCGCATTCTTCAGATGGTTCAACCCATAAGTTAGCGCGGATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTT                                                <  1:112932/140‑1
                                                                                                     TCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAAAAAACGAGATTGCATTTGCCTGGAAGTGAAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGG                                          >  1:369359/1‑143
                                                                                                          TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAAGCCAGGAGCGACGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGCGCGTACGACGGGTCGGG                                     >  2:528440/1‑143
                                                                                                             TTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGAGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACAGCAGTTAGTAGAGCGTGCGTCGGGCCAGGAGa                                  >  2:682277/1‑142
                                                                                                                AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTG                               >  1:176422/1‑143
                                                                                                                 GATGGTTCAACCCTTAAGTTAGCGCTGATGGGAAAAGCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGCCAGGATTGTGA                              <  2:191232/143‑1
                                                                                                                  ATGGTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTCTCGGGTCAGGAGTGTGAA                             >  1:751534/1‑143
                                                                                                                     GTTCAACCCTTAAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCCTGAGCGCAGCAACCTCCTCATCACCGTTCCGGCACTTGTAGTCGTAGAGCGTTTGTCGGGTCAGGCGTGTGAATGT                          >  1:73927/1‑143
                                                                                                                                AAGTTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAA               <  1:464193/143‑1
                                                                                                                                   TTAGCGCTTATGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTCGAGCGTTTGTCGGGTCAGGCGTGCGAATGTCAGAATCGTACTGC            >  1:697503/1‑143
                                                                                                                                   TTAGCGCTTATGGGAAAATCCCCGCGCTCGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGC            <  1:19926/143‑1
                                                                                                                                            ATGGGAAAAGCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGA   <  1:542579/143‑1
                                                                                                                                             TGGGAAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG  <  1:347559/143‑1
                                                                                                                                                                                                                                                                                             
ATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609206‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaAAATCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACCTCCTTATCACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAG  >  NC_000913/1491904‑1492041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.