Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1293040	1306931	13892	46 [0]	[1] 36	tdk–[yciU]	tdk,insZ,insZ,insZ,adhE,ychE,oppA,oppB,oppC,oppD,oppF,[yciU]

AGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292900‑1293180                                                                                                                                            |                                                                                                                                              aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGTAATAGCCAGGAATGTAAGGAATTCAAAATTGTACTTTCGTTTGTGCCGggt                                                                                                                                            <  2:423091‑M2/143‑4 (MQ=255) aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTTTACCGggt                                                                                                                                            <  2:467318‑M2/143‑4 (MQ=255)         aaGTGCTTCGCTCATTGGAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                                    >  2:143174‑M2/1‑132 (MQ=255)            tGCTTCGCTTATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                 >  1:753409‑M2/1‑129 (MQ=255)             gCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                <  1:618448‑M2/143‑16 (MQ=255)                      aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                                       <  1:581742‑M2/143‑25 (MQ=255)                        tGTAGTAATCGCAAACTTATATCGGGGTGGTTTGTTGAGGTAATAATAGAGACTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagt                                                                                                                     >  2:739859‑M2/1‑117 (MQ=255)                         ggagtaagCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtg                                                                                                                    >  2:244072‑M2/3‑116 (MQ=255)                                 ctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgt                                                                                                            >  1:560169‑M2/1‑108 (MQ=255)                                    aaaCTTATATTGGGGGGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                                         >  1:481550‑M2/1‑105 (MQ=255)                                          atatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcaaacttattgagagtcttttatgttcagataat                                                                                                   <  1:534472‑M2/143‑45 (MQ=255)                                                gggTGGTTTGTTGAGGGAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                             >  1:190261‑M2/1‑93 (MQ=255)                                                gggTGGTTTGTTGAAGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                             >  2:5999‑M2/1‑93 (MQ=255)                                                 ggtggtTTGTGGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATCGCACGGAATGTTGAGGATGCAAAGTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                            <  1:600210‑M2/143‑52 (MQ=255)                                                    ggtGTGGTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                         >  1:415759‑M2/1‑89 (MQ=255)                                                     gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                                        >  1:784092‑M2/1‑88 (MQ=255)                                                       ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                      <  2:135909‑M2/143‑58 (MQ=255)                                                          ttgAGGTAATAATAGGGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                                   >  2:164646‑M2/1‑83 (MQ=255)                                                          ttgAGGTAATAATAGAGCGTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                                   >  2:572273‑M2/1‑83 (MQ=255)                                                          ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                                   >  1:835373‑M2/1‑83 (MQ=255)                                                              ggTAATAATAGAGCTTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAGATTGTTCTTTATTTTGTGCCGggtgatgactccaactttttgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                               >  1:224110‑M2/1‑79 (MQ=255)                                                              ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcaagc                                                                               <  2:486963‑M2/143‑65 (MQ=255)                                                               gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatcactccaacttattgatactgttttatattcatataattcccgctcactttgtcatgca                                                                              <  1:592456‑M2/143‑66 (MQ=255)                                                                taataaTAGATCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                             >  2:560348‑M2/1‑77 (MQ=255)                                                                      gagagcGGTAAAGTCGGTTGGGCTATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgagtccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       >  2:589256‑M2/2‑71 (MQ=255)                                                                          gCCTTATATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                   >  2:305447‑M2/1‑67 (MQ=255)                                                                             ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgctagtgttttatgttcagatactgcccgatgactttgtcatgcaactgcacccgcttt                                                                <  2:94292‑M2/143‑80 (MQ=255)                                                                             ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatcactttgtcatgcagctctcacgatttt                                                                <  2:506355‑M2/143‑80 (MQ=255)                                                                              tAAATTCAGTTGGTCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                               >  2:617286‑M2/1‑63 (MQ=255)                                                                                      gTTGTGCAATAGCCAGGAACGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataaggcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                       >  2:241058‑M2/1‑55 (MQ=255)                                                                                         gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcggataatgcccgatgactttgtcatgcagctccaccgattttgagaacgactgc                                                    <  1:549648‑M2/143‑92 (MQ=255)                                                                                             aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                >  2:749321‑M2/1‑48 (MQ=255)                                                                                              aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                               >  1:366534‑M2/1‑47 (MQ=255)                                                                                                 gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                            >  1:38981‑M2/1‑44 (MQ=255)                                                                                                 gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgacagaaatccctcccgtgcagcttgaccgatttttagaacgacagcgacttccg                                            <  1:636641‑M2/143‑100 (MQ=255)                                                                                                     ggATTGTAAGGTATTCATAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                        >  2:260688‑M2/1‑40 (MQ=255)                                                                                                        aTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                     >  1:427247‑M2/1‑37 (MQ=255)                                                                                                            aaGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccaggcgtg                                 <  2:215495‑M2/143‑111 (MQ=255)                                                                                                                   tCAAACTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatggtcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                          >  1:815528‑M2/1‑26 (MQ=255)                                                                                                                      aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                       <  1:715753‑M2/143‑121 (MQ=255)                                                                                                                       aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                      >  2:86544‑M2/1‑22 (MQ=255)                                                                                                                         ttGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                    >  1:760341‑M2/1‑20 (MQ=255)                                                                                                                          tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                   >  1:625792‑M2/1‑19 (MQ=255)                                                                                                                             tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga                >  2:784819‑M2/1‑16 (MQ=255)                                                                                                                                ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccctcccagccgtgccagctgctgcctcacatcg             <  1:738411‑M2/143‑131 (MQ=255)                                                                                                                                           cGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg  >  1:177997‑M2/1‑2 (MQ=255)                                                                                                                                            |                                                                                                                                              AGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292900‑1293180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑