| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,755,755 | IS5 (+) +4 bp | coding (58‑61/1413 nt) | pykF → | pyruvate kinase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 24 (1.200) | 20/284 | 0.1 | 95.9% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1755755 = | 1 (0.050) | coding (58/1413 nt) | pykF | pyruvate kinase I | |||||
| * | ? | NC_000913 | = 1755758 | 1 (0.050) | 19 (0.950) | 18/284 | 0.2 | 94.9% | coding (61/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATG > NC_000913/1397102‑1397373 | aTACCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCAGCACAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCAGCTTATTCGCACCTTCCctaact > 2:250955/1‑143 (MQ=2) gCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCGCCGCTTATTCGCACCTTCCCTAACTAAtga > 2:236071/1‑141 (MQ=17) gaagaaACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCAACTTCCCTAACTAATCAATGCGTTGATTg > 1:312566/1‑143 (MQ=255) cTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCt < 1:159057/143‑1 (MQ=255) tatgCTGATTTAAGGCATTTACGGGAGAAAAAATCGGCTCCTCCTTGGAGGAGTGAAATGAGTGAGTCAGCCCAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAagag < 1:257308/140‑1 (MQ=18) tGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGCATGTAAATCCAGCTAAgaggtgac > 2:127203/1‑142 (MQ=255) aCGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCTCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTATAAATCCAGCTAAGAAGTGAGGTATTCAGAGCAGAc > 1:100155/1‑143 (MQ=255) cAAACATGAAGAAATGAAATGCCTGAGTCAGCTGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGt < 2:279120/143‑1 (MQ=255) caacgaaatgaCTTAGTCATCCGATAAGAACTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCATCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGtt < 2:347247/139‑1 (MQ=38) gTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACATTCCCTAACTAATAAATGCGTTGATTGTAAATGCAGCTAAGAGGAGAGGTTCTCAGAGCAGACAAAGGTGAAATGTCATGGTATTGTTACGTGTAGGTAACaacatgt > 2:219180/1‑138 (MQ=37) tCAGCCGAGAAGAATTTCCACGCTTATTCGCACCTACCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTAAGGTTTTCAGAGCAGACAACGGTGAAATGTCAAGGTATTGTTACGTTTAGGTAACAAGAAAtt > 2:32936/1‑143 (MQ=255) gCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGt < 1:316389/143‑1 (MQ=255) tcctagCTTATGCGAACCTTTCCTAACTTATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATTGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGAtt < 2:32266/138‑1 (MQ=255) ctctttCTCTATCTATTCAATGCGTTGATTGTAAATCTAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATg < 2:308528/139‑1 (MQ=255) | ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATG > NC_000913/1397102‑1397373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |