Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 417,368 Δ5 bp coding (227‑231/690 nt) phoB → response regulator in two‑component regulatory system with PhoR

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 417368 417372 5 15 [0] [0] 14 phoB response regulator in two‑component regulatory system with PhoR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4173670 (0.000)14 (0.700) 13/284 0.5 100% coding (226/690 nt) phoB response regulator in two‑component regulatory system with PhoR
?NC_000913 417373 = 0 (0.000)coding (232/690 nt) phoB response regulator in two‑component regulatory system with PhoR

GCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATT  >  NC_000913/417235‑417510
                                                                                                                                          |                                                                                                                                         
ttgaagcggaagattatgatagtgctgtgaatctaatgaatgaaccctggccggatttaattctcctcgactggatgttacctggcggctccggtatccagttcataaaacacctcaagcgcgagtcgatgacccgggCCAgt                                                                                                                                       <  1:386612‑M2/5‑1 (MQ=255)
tcgaagcggaagattatgacagtgctgtgaatcaactgaatgaaccctggccggatttaattctcctcgattgtatgttacctggcggctccggtatccagttcatcaaacacctcaagcgcgagtcgatgacccgggCCAgt                                                                                                                                       <  1:206034‑M2/5‑1 (MQ=255)
           gattatgacagtgctgtgaatcaactgaatgaaccctggccggatttaattctcctcgactggatgttacctggcggctccggtatccagttcatcaaacacctcaagcgcgagacgatgacccgggCCAGGGGTGAGGTTGa                                                                                                                            >  2:371775‑M2/128‑143 (MQ=255)
             ctacgacagtgctgtgaatcaactgaaggaaccctggccggatttaattctcctcgactggatgttacctggcggctccggtatccagttcatcaaacacctcaagcgcgagtcgatgtcccgggCCAGTGGTGATGTTGAcc                                                                                                                          <  2:336116‑M2/18‑1 (MQ=255)
                 gacagtgctgtgattcaactaaatgatccctggtctgttttaattttcctcgactggatgttacctggcggctccggtatccagttcatcaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCa                                                                                                                      <  1:246827‑M2/22‑1 (MQ=255)
                    agtgctgtgaatcaactgaatgaaccctggccggatttaattctcctcttttttatgttacctggcggctccggtatccagttcatcaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCagag                                                                                                                   <  1:20733‑M2/25‑1 (MQ=255)
                                   ctgaatgaaccctggccggatttaattctcctcgactggatgttacctggcggctccggtatccagttcatcaatcacctccaccgccagccgatgaccccggCCCGTGGCGATGTTGACCGCAAGAGCGAAAGAAGAGGATc                                                                                                    >  1:69735‑M2/104‑143 (MQ=255)
                                            ccctggccggatttaattctcctcgactggatgttacctggcggctccggtatccagttcatcaaacacatcaagcgcgaggcgaggaccagggCCCGCGGAGACGGTGACCGTCAGAGGGGAAGAAGAAGATCGCGTGcgcg                                                                                           <  1:259345‑M2/49‑1 (MQ=255)
                                                      atttaattctcctcgactggatgttacctggcggctccggtatccagttcatgaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAAc                                                                                 <  1:386291‑M2/59‑1 (MQ=255)
                                                          attgttcctcggctgtgtgttaccgggcgtctccggtatccagttcatcaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCAGAGGGGAACAAGAAGATCGCGTGCGCGGCCTTGAAACCGgc                                                                             <  2:45408‑M2/63‑1 (MQ=255)
                                                                                                    gttcatcaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCAGCGGGTAAGAAGAAGATCGAGTGCGCGAAATTAAAAAAGGAGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCtg                                   >  1:89925‑M2/39‑143 (MQ=255)
                                                                                                     ttcatcaaacacctcaagcgcgagtcgatgacccgggCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCtgg                                  >  2:296856‑M2/38‑143 (MQ=255)
                                                                                                                                atgacccgggCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTTTATCACCAAGACGAATTCGACAAAGGAGAAGGTGGCGAGAAACAAAGAGGtaatgaacc       >  1:132105‑M2/11‑139 (MQ=255)
                                                                                                                                     ccgggCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGGAGGAGCTGGTGGCGCGAATCAAAGCGGTAATACGCCGAAtt  >  1:99026‑M2/6‑143 (MQ=255)
                                                                                                                                          |                                                                                                                                         
GCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATT  >  NC_000913/417235‑417510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.