New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3467131 =	50 (0.460)	4 (0.040)	4/506	NT	7.7%	intergenic (‑140/+29)	bfd/chiA	bacterioferritin‑associated ferredoxin/periplasmic endochitinase
	?	NC_000913	3467153 =	48 (0.450)					intergenic (‑162/+7)	bfd/chiA	bacterioferritin‑associated ferredoxin/periplasmic endochitinase

CTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTC  >  NC_000913/3466847‑3467408                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                      ccatcccaataagagcgatgcagaaattgacgctatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGa                                                                                                                                                                                                                                                                                   >  2:917173‑M1/285‑289 (MQ=255) ccaacccaatgagggcggtgcagaaattgacggtatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatggtcgtcttggcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGa                                                                                                                                                                                                                                                                                   >  1:725045‑M1/285‑289 (MQ=255)   atcccaataagagcgatgcagaaattgacgctatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATa                                                                                                                                                                                                                                                                                 >  2:276493‑M1/283‑289 (MQ=255)    cACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGAt                                                                                                                                                                                                                                                                                  >  2:727797/1‑287 (MQ=255)             cccGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGt                                                                                                                                                                                                                                                                        <  2:127533/288‑1 (MQ=255)                                                                               gggAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTTCTTAGTAAACGGCACGAAGATTTCGCTAAATGCGTACTTCGGTg                                                                                                                                                                                                         >  2:368945/1‑285 (MQ=255)                                                                                ggAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:727797/287‑1 (MQ=255)                                                                                              ctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATACCTTCCAGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGt                                                                                                                                                                                                          >  2:91870‑M1/192‑269 (MQ=255)                                                                                              ctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATACCTTCCAGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGt                                                                                                                                                                                                          <  1:91870‑M1/78‑1 (MQ=255)                                                                                                   tGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGa                                                                                                                                                                                 >  2:786753/1‑289 (MQ=255)                                                                                                                           ccATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTgccgc                                                                                                                                                         <  2:737200/289‑1 (MQ=255)                                                                                                                                      aCAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTc                                                                                                                                               >  2:678855/1‑288 (MQ=255)                                                                                                                                        aaaCGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTcgcg                                                                                                                                            <  1:678855/289‑1 (MQ=255)                                                                                                                                                    agaCTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:447130/219‑1 (MQ=255)                                                                                                                                                    agaCTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      >  2:447130/1‑219 (MQ=255)                                                                                                                                                                  tttCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTTCCGCCCGCGACGTCGCGCGCGGTTGACCTGATACCAACCATa                                                                                                                   >  2:914513/1‑288 (MQ=255)                                                                                                                                                                      ttcAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTAtt                                                                                                                                                                                                                                                      <  1:959752/153‑1 (MQ=255)                                                                                                                                                                      ttcAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTAtg                                                                                                                                                                                                                                                      >  2:959752/1‑152 (MQ=255)                                                                                                                                                                                                aTTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATg                                                                                     >  2:31763/1‑288 (MQ=255)                                                                                                                                                                                                               aGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCag                                                                     <  1:138618/289‑1 (MQ=255)                                                                                                                                                                                                                  ctctTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagag                                                                   <  1:786753/288‑1 (MQ=255)                                                                                                                                                                                                                       ttttAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATacca                                                                                                                         <  1:206740/229‑1 (MQ=255)                                                                                                                                                                                                                       ttttAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATacca                                                                                                                         >  2:206740/1‑229 (MQ=255)                                                                                                                                                                                                                                 aGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              <  2:152344/262‑1 (MQ=255)                                                                                                                                                                                                                                 aGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              >  1:152344/1‑262 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      >  2:661229/1‑130 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:661229/130‑1 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAt                                                                        >  1:965908/1‑256 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAt                                                                        <  2:965908/256‑1 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtcgt                                       >  2:554491/1‑289 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtcgt                                       >  1:14287/1‑289 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCACGCCCTGAAcgtcgt                                       >  2:828919/1‑289 (MQ=255)                                                                                                                                                                                                                                             tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAAACATCCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATCGAACACACCGCCCGGAAcggcgt                                       >  2:544466/1‑289 (MQ=255)                                                                                                                                                                                                                                                          tGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa                                                            >  1:193334/1‑255 (MQ=255)                                                                                                                                                                                                                                                          tGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa                                                            <  2:193334/255‑1 (MQ=255)                                                                                                                                                                                                                                                               tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATCCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTCCACGCCAACCATCGGCg                     >  1:674924/1‑289 (MQ=255)                                                                                                                                                                                                                                                               tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCg                     <  1:31763/289‑1 (MQ=255)                                                                                                                                                                                                                                                               tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCg                     >  2:915047/1‑289 (MQ=255)                                                                                                                                                                                                                                                               tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCCCGCGCGATTGACCAGATACCAACCATACCGAGCTTACGCTTCTGCGCATCCTGCATGACCAGCCGCGCATCAGAGAGATACCACACCCTGCCCTGAACCTCCCTCACGCCAACCATCGGc                      >  2:930502/1‑288 (MQ=255)                                                                                                                                                                                                                                                                 ccAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATCTATTGCTTAGTAAACGGCGCGACGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGCATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGCTTAGCCGTCGGCGCACCCTGCATGCCCAGACGTGCCTCCGACAGATAGAACACCTCGCCCTGCACGTCGTTCACCCCCACCATCGGcacg                   >  2:370133/1‑286 (MQ=255)                                                                                                                                                                                                                                                                      aGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTAc               >  1:783788/1‑288 (MQ=255)                                                                                                                                                                                                                                                                       gTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTCCGCATCCTGCACGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGCACGTCGTTCACGCCAACCATCGGCGTGGTAcc              >  2:260995/1‑288 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              <  1:710794/220‑1 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              >  2:710794/1‑220 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:635816/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:160131/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:437349/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:591744/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:989332/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  2:301035/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCGCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACccacca         >  2:486431/1‑289 (MQ=255)                                                                                                                                                                                                                                                                           cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAACAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  2:278282/1‑289 (MQ=255)                                                                                                                                                                                                                                                                             aagcaataaatgtgttGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTg                   <  1:337679‑M1/261‑1 (MQ=255)                                                                                                                                                                                                                                                                             aagcaataaatgtgttGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTg                   >  2:337679‑M1/17‑277 (MQ=255)                                                                                                                                                                                                                                                                                tGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCg    >  1:524726/1‑289 (MQ=255)                                                                                                                                                                                                                                                                                 gACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGt   <  1:554491/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                  aCAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTc  <  2:524726/289‑1 (MQ=255)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                      CTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTC  >  NC_000913/3466847‑3467408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.