New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 294864	78 (1.190)	7 (0.110)	7/264	7.6	8.8%	intergenic (‑65/+275)	yagM/yagN	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
	?	NC_000913	= 294873	72 (1.170)					intergenic (‑74/+266)	yagM/yagN	CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTGGGCGAGGTAGC  >  NC_000913/294732‑295014                                                                                                                                              |                                                                                                                                               ttGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCg                                                                                                                                               >  1:658072/1‑143 (MQ=255)  tGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCgg                                                                                                                                              >  1:894405/1‑143 (MQ=255)    ccTTGACAAGGTTTTTTTCATAGTAGAACGCTTCTCATCTCAAAATTATGAATACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCCCAGTGTTGACCCATTTTTCTCgggg                                                                                                                                            <  2:434993/143‑1 (MQ=255)        gACAAGGTTTTTTTTTTTTTTTTACGCTGCTCATCTCAAAATTAGTAACACTTTTTGACATTTTTAAGGAAACCTTTTCGTTATCTCATTATAAAACTACTTTCTTATATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAAc                                                                                                                                        >  2:969457/1‑143 (MQ=255)           aaGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCTCTTTTCTCGGGGCAACTTc                                                                                                                                     >  1:461808/1‑143 (MQ=255)           aaGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATc                                                                                                                                     >  1:1046386/1‑143 (MQ=255)            aagTTCTTTTCCTGGTAGAGCGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCGCTTTGTTATCTCACTATAACACTACTATCTGAAATTGCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCg                                                                                                                                    <  2:591360/141‑1 (MQ=255)            aGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCg                                                                                                                                    <  1:159535/143‑1 (MQ=255)              gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTCTCTCGGGGCAACATCGCt                                                                                                                                  >  2:565011/1‑143 (MQ=255)               tttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCta                                                                                                                                 <  1:1110456/143‑1 (MQ=255)               tttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACACCGcga                                                                                                                                 >  1:355249/1‑141 (MQ=255)                ttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCtat                                                                                                                                >  1:345015/1‑143 (MQ=255)                ttgtttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGTGCAACATCGCtat                                                                                                                                <  2:916155/140‑1 (MQ=255)                    ttCCTGGTAGAACGCTGGTGATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAAt                                                                                                                            <  2:209812/143‑1 (MQ=255)                       cTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCaa                                                                                                                         <  2:988778/143‑1 (MQ=255)                            aGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATaaaa                                                                                                                    <  1:1032425/143‑1 (MQ=255)                              aaCGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTGTCTCAGGGCAACATCGCTATAAAGCAATAAAAtt                                                                                                                  >  2:435021/1‑143 (MQ=255)                                cGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                                <  2:199313/143‑1 (MQ=255)                                 gctgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa                                                                                                               <  1:1180884/143‑1 (MQ=255)                                 gctgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa                                                                                                               <  1:819086/143‑1 (MQ=255)                                    gctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCt                                                                                                            <  2:57734/143‑1 (MQ=255)                                        aTCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTaa                                                                                                        <  1:766332/143‑1 (MQ=255)                                         tctcAAAGTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAACTCAATAAAATTAAATCTGTAAt                                                                                                       >  2:498805/1‑143 (MQ=255)                                           tcAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAAttt                                                                                                     >  1:250028/1‑143 (MQ=255)                                           tcAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAAttt                                                                                                     >  1:817962/1‑143 (MQ=255)                                            cAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATtta                                                                                                    >  2:1172376/1‑143 (MQ=255)                                              aaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatt                                                                                                  <  1:881742/143‑1 (MQ=255)                                               aaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatta                                                                                                 <  2:548036/143‑1 (MQ=255)                                                  tAGTAACATTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAg                                                                                              <  2:754807/143‑1 (MQ=255)                                                       acacTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACttt                                                                                         >  2:304804/1‑143 (MQ=255)                                                          cTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtctc                                                                                      <  1:969457/143‑1 (MQ=255)                                                          cTATTAGACATTCTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCTGGGCAACATCGCTATAAATCAATAAAATTAATTCTGTAATTTATTACAGACTTtctc                                                                                      <  2:382068/143‑1 (MQ=255)                                                          cTATTACACATTTTTAAGTAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTTTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtctc                                                                                      <  1:448439/143‑1 (MQ=255)                                                           tATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                                     >  1:191755/1‑143 (MQ=255)                                                           tATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                                     >  1:374628/1‑143 (MQ=255)                                                              tAGACATTGTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCTCTTTTTCTCGGTGCAACATGGCTAGAAATTAATAAAATTACATCCTTAATTCATTACGAACTTTCTCGTAc                                                                                  >  2:749810/1‑143 (MQ=255)                                                                gACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTAGTACAg                                                                                >  2:396549/1‑143 (MQ=255)                                                                 aCATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGa                                                                               >  1:41573/1‑143 (MQ=255)                                                                  cATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCACATTTTTCTCCGGGCAACACCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTCCTCGTCCAGaa                                                                              >  2:780248/1‑143 (MQ=255)                                                                   aTTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGaaa                                                                             >  1:795744/1‑143 (MQ=255)                                                                    gttttAAGGAAGCCTTTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCAATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGaaaa                                                                            <  2:512269/142‑1 (MQ=255)                                                                     ttttAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAAt                                                                           <  1:250770/143‑1 (MQ=255)                                                                         aaGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTAt                                                                       <  2:278612/143‑1 (MQ=255)                                                                                  tctTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATCAAATTAAATCTGTAATTTCTTCCAGACTTTCTCGTACAGAAAATGTATCTATAAAAt                                                              >  2:808881/1‑143 (MQ=255)                                                                                  tctTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGATATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAAt                                                              >  1:997875/1‑143 (MQ=255)                                                                                     ttGTTAGCTCAATATAAAACTACGATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGa                                                           <  2:824669/143‑1 (MQ=255)                                                                                      ttgtATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGGTATAAATCAATAAAATTAAATCTGTACTTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:386337/140‑1 (MQ=255)                                                                                      tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:713516/143‑1 (MQ=255)                                                                                      tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  2:370112/143‑1 (MQ=255)                                                                                      tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:467924/143‑1 (MQ=255)                                                                                      ggTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:575712/142‑1 (MQ=255)                                                                                           tctcAATATAAAGCTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACAt                                                     <  2:658072/143‑1 (MQ=255)                                                                                           tctcAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATGTTTCTCGGGGCAACATCGCTATACATCAATAAAATTAAATCTGTAATTTATTACAAACTTTCTCTTACAGAAAAAGTATCTATAAAATCACGGACAt                                                     >  1:1188982/1‑143 (MQ=255)                                                                                            ctcAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATc                                                    >  1:335610/1‑143 (MQ=255)                                                                                               aacataAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:854170/140‑1 (MQ=255)                                                                                               aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:694537/143‑1 (MQ=255)                                                                                               aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 >  1:861636/1‑143 (MQ=255)                                                                                               aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:756815/143‑1 (MQ=255)                                                                                                     aaaCTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTaa                                           <  2:298622/143‑1 (MQ=255)                                                                                                        ctactaTCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCa                                        <  2:653238/143‑1 (MQ=255)                                                                                                              tCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATCAAATCGACGACAACATAACTTAACAACTAATg                                  >  2:1083409/1‑143 (MQ=255)                                                                                                                tGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggc                                >  1:44128/1‑143 (MQ=255)                                                                                                                 gAAATTTCTTAGTGTTTCCCCATTTTTCTCGTGCCAACATTGCTATAAATCAATAAAATTAAATCTGTCATTTATTACAGACTTTCGCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggcg                               <  2:40149/143‑1 (MQ=255)                                                                                                                         tcAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGa                       <  1:870833/143‑1 (MQ=255)                                                                                                                          cAGTGTTGCCCCCTTTTTCTCGTGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAt                      <  1:6339/143‑1 (MQ=255)                                                                                                                           aGTGTTGCCCCATTGTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGGACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAtt                     <  1:861294/143‑1 (MQ=255)                                                                                                                            gtgtTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAttt                    <  2:297041/143‑1 (MQ=255)                                                                                                                               ttGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAAGTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑Gtt                <  2:204188/143‑1 (MQ=255)                                                                                                                                tGCCCCATTTTTCTCGGGGCAACGTCGCTATAACTCCCTTGCATCAAATCTATAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑Gttt               <  1:1172376/143‑1 (MQ=255)                                                                                                                                 gCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑Gtttt              <  2:651556/143‑1 (MQ=255)                                                                                                                                  ccccATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTg             <  1:806783/143‑1 (MQ=255)                                                                                                                                   cccATTTTTCTCGGTGCAACATCGCTATAAATCAATACAATTAATTCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATCAAATCTCGTACATTTTTACGTATCCAGTAATGGCGGCCATTTATTTAGttttt             >  2:42357/1‑142 (MQ=255)                                                                                                                                    ccATTGTTCACGGGGCAACATCGCTATAAATCAATAAAATTAAATCTCTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTggg           <  2:355249/143‑1 (MQ=255)                                                                                                                                     cATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAGTGTATCTATAAAATCGAGGACATCTTTACGTAACAAGTAATGGCGGACATTGAGTT‑ATTTTggga          >  2:453298/1‑142 (MQ=255)                                                                                                                                       tttttCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTGGGCGa        <  2:814230/143‑1 (MQ=255)                                                                                                                                         tttCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCGCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTGGGCGAgg      >  1:323608/1‑143 (MQ=255)                                                                                                                                             tcGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCAGTGATTT‑GTTTTGGGCGAGGTAGc  >  1:980796/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               TTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTT‑GTTTTGGGCGAGGTAGC  >  NC_000913/294732‑295014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.