| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 417,075 | (TCATAAATCTG)2→1 | intergenic (‑123/‑57) | sbcD ← / → phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 417075 | 417085 | 11 | 49 [0] | [0] 49 | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 417074 | 0 (0.000) | 47 (1.070) | 42/260 | 0.1 | 100% | intergenic (‑122/‑68) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| ? | NC_000913 | 417086 = | 0 (0.000) | intergenic (‑134/‑56) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR | |||||
GAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAA > NC_000913/416933‑417215 | gAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGa < 2:253436‑M1/143‑2 (MQ=255) gtgAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcat > 2:131306‑M1/1‑137 (MQ=255) gAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCAATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATATGCGACGAGCTTTTCATAAATCTGacgcgtaa > 2:282943‑M1/1‑135 (MQ=255) gAAGGATGCGCATAACGGTTCCCTGGCGAAAAAACATGGCCGCGATTATACCCAAACAGATGTGCAATTTGCTTTTTTCTGCGCCCCGGAAATCAATAACCTGAAGATATCTGCGACGAGCTGATCATAAATCTGccgaataa > 2:240593‑M1/1‑135 (MQ=255) aaGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataac > 1:621019‑M1/1‑134 (MQ=255) gATGCTCATAACGGTTTCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAAGCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgac < 1:247330‑M1/143‑13 (MQ=255) cgcATAACGGTTCCCTGGCGAAGAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATGTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATACGTGCGACGAGATTTTCAGAAATCTGacgcataatgacgtgg > 2:536653‑M1/1‑127 (MQ=255) gcATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGGAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGgcgcataatgacgtcgc > 1:830615‑M1/1‑126 (MQ=255) gcATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgc < 2:451932‑M1/143‑18 (MQ=255) aTAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcat > 2:193809‑M1/1‑124 (MQ=255) gTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatga < 1:38226‑M1/143‑26 (MQ=255) ttCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGTCTTTTGAAGGCAACTACGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgat < 1:196213‑M1/143‑27 (MQ=255) ttcctgGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatc < 2:310367‑M1/141‑28 (MQ=255) tCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatc < 1:625839‑M1/143‑28 (MQ=255) cTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGCTGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGCAGCTATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtagcatcaatcatgtca > 2:555577‑M1/1‑113 (MQ=255) tGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGCGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgaaa > 1:233943‑M1/1‑112 (MQ=255) gCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacc < 2:845305‑M1/143‑34 (MQ=255) cGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgaacgcgacct > 2:457230‑M1/1‑109 (MQ=255) aaGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctattta < 2:591400‑M1/143‑40 (MQ=255) ggCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctagttattacaac > 1:534779‑M1/1‑97 (MQ=255) gcgcgcTTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaaca < 1:805771‑M1/143‑48 (MQ=255) gcgcGATTATACCCAAACAGATGTGCCATTTGCTTTTTGCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaaca < 1:565480‑M1/143‑48 (MQ=255) gcgcGATTATACCCAAACAGATGTGCCATTTGCTTTTTGCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaaca > 2:561346‑M1/1‑96 (MQ=255) cttttataCTCATACAGATGTTCCATTTGCTTTTTTCTGCGCCACGTAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTTacgtataatgacgtcgcattaatgatcgcaacctatttattacaacaggg < 2:34243‑M1/140‑51 (MQ=255) taCCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatc < 1:170320‑M1/143‑57 (MQ=255) cccAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcat < 1:452515‑M1/143‑59 (MQ=255) ccAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatg < 1:650813‑M1/143‑60 (MQ=255) aaCAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcg > 1:860771‑M1/1‑81 (MQ=255) aaCAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGAGATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaccctatttcttacaaccgggcgaatcatggcg > 1:39700‑M1/1‑81 (MQ=255) tgCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtat > 2:155647‑M1/1‑73 (MQ=255) ccATTTGCTTGTTTCTGCGCCACGGAAATCAATAACCTGAATATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattc < 2:578681‑M1/143‑73 (MQ=255) ttttttCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaaccgatttattacaacagggcaaatcatggcgagacggcttctcggccga > 2:2483‑M1/1‑63 (MQ=255) gAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaa < 2:534779‑M1/143‑97 (MQ=255) aTCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattc > 1:395587‑M1/1‑44 (MQ=255) tCACTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacatcagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcg < 1:384729‑M1/143‑101 (MQ=255) tCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcg > 1:805127‑M1/1‑43 (MQ=255) cAATACCCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgc < 1:334014‑M1/143‑102 (MQ=255) aaTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgcg > 2:658199‑M1/1‑41 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtagtagaagatgaagcaccaattcgcga > 2:49681‑M1/1‑40 (MQ=255) tGAAGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgcgaaatggt < 1:491608‑M1/143‑110 (MQ=255) aaGATATGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaatttgcgaaatggtct > 2:566798‑M1/1‑32 (MQ=255) tatGTGCGACGAGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtggaagatgaagctccaattcgcgaaatggtctgctt < 2:474649‑M1/143‑116 (MQ=255) tgCGACGAGCTTTTCGTCAAGCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaccagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgcgaaatggtctgcttcgtg < 1:595024‑M1/143‑120 (MQ=255) cgacgaGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgcgaaatggtcggctccgtgct > 2:855504‑M1/1‑22 (MQ=255) gacgaGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaactcatggcgagacgtattctggtcgtagaagatgaagatccaattcgcaaaatggtctgctgcgtgcac > 2:484603‑M1/1‑21 (MQ=255) gacgaGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtgttctggtcgtagaagatgaagctccaattcacgaaataatctacttcgtgctc > 1:245005‑M1/1‑21 (MQ=255) acgaGCTTTTCATAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctctaattcgcgaaatggtctgcttcgtggtcg > 1:761978‑M1/1‑20 (MQ=255) tAAATCTGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagaggtattcttgtcgtagaagatgaagctccaatgcgcgaaatggtctgcttcgtgctaggacaaaatggct > 2:196089‑M1/1‑8 (MQ=255) tGacgcataatgacgtcgcattaatgatcgcaacctatttattacaacagggcaaatcatggcgagacgtattctggtcgtagaagatgaagctccaattcgcgaaatggtctgcttcgtgctcgaacaaaatggctttcagc < 2:860771‑M1/143‑142 (MQ=255) | GAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAA > NC_000913/416933‑417215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |