New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2729630 =	NA (NA)	7 (0.150)	5/272	6.1	NA	noncoding (1528/1542 nt)	rrsG	16S ribosomal RNA of rrnG operon
	?	NC_000913	2729652 =	NA (NA)					noncoding (1506/1542 nt)	rrsG	16S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.

TTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGA  >  NC_000913/2729495‑2729707                                                                                                                                        |                                                                              ttCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAg                                                                        <  1:429467/143‑1 (MQ=255)  tCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTTATCACTTCAAATTACGCTTCTTTAAGTTAAGGAGATGATCAAACCGCAgg                                                                       >  1:50148/1‑143 (MQ=11)     ttAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTc                                                                    >  1:289718/1‑143 (MQ=255)     ttAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTCATCCAAACGCacgatc                                                                    >  2:117012/1‑138 (MQ=255)       agtAGAAAGCGCACGGCCTTATTCTCTTCAGCCTCACTCCCGACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTccc                                                                  <  2:418174/141‑1 (MQ=255)       aaTAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTccc                                                                  <  2:233990/143‑1 (MQ=39)           gAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTAc                                                              <  1:195047/143‑1 (MQ=40)           gAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTATTTAAGGTAAGGAGGGGACCCAACACCAGGTTCCCCtca                                                              >  2:527903/1‑141 (MQ=14)            aaaGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACg                                                             <  2:685417/143‑1 (MQ=255)                                   ccgCCTCACTCCCACCTCGTAACCGCCTTGCTATTCACTTTTCATCGGACGATCTGTGTGAGCACTGCACAGTACGCTTCTTTAAGGTAAGGAGGTGCTGCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCAccc                                      <  2:61506/141‑1 (MQ=14)                                   cAGCCTCACTCCCAACGGGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCAccc                                      <  2:776167/143‑1 (MQ=255)                                    aGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGGGCACTGCAAAGTACGCTTCTGTAAGGTAAGGAGGTGATCCAACCGCAGGCTCCCCTACGGTTACCTTGTTAGGAATTCAcacc                                     >  2:287247/1‑143 (MQ=14)                                       cTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGt                                  <  2:417264/143‑1 (MQ=40)                                        tCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAGAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCAAGTc                                 >  1:222648/1‑143 (MQ=255)                                          aCTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCAt                               <  2:69636/143‑1 (MQ=40)                                          aCTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCAt                               >  1:382337/1‑143 (MQ=255)                                            tCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGCAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTCGTTACGACTTCACCCCACGCATgc                             >  2:509721/1‑142 (MQ=255)                                            tCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGGGAGCACTGCAAAGTACGCTTCTTTCAGGTAAGGAGGTGACCCAACCGCAGGCTCCCCTACGGTTACCTGGTTCCGACTTCACCCCAGTCACGa                             >  2:626148/1‑143 (MQ=14)                                             cccAACGCGTAAACTTCTTTCTATTCACTTTTCCTCAGACATTCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGaa                            <  2:41909/143‑1 (MQ=14)                                              ccAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAAt                           <  1:744822/143‑1 (MQ=255)                                              ccAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAAt                           <  1:831185/143‑1 (MQ=255)                                              ccAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGGGATCCAACCGACGGTGTGACTACGCTTACCTTGTTACGACTTCACCCCAGTCAtcacg                           >  2:608065/1‑139 (MQ=14)                                               cAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGATACGTTGGTGCGACTTCACCCCAGTCATGaacc                          >  1:28379/1‑141 (MQ=255)                                                caCGCGCAACCGCCTTGCTATTCACGTTTCATCAGACAATCTGTGTGAGTACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATca                         <  1:620752/142‑1 (MQ=255)                                                aaCGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATca                         <  1:640693/143‑1 (MQ=40)                                                aaCGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATca                         <  2:367532/143‑1 (MQ=40)                                                aaCGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATca                         <  2:186592/143‑1 (MQ=39)                                                   gcgTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACaa                      <  1:697236/143‑1 (MQ=40)                                                    cgtggaCGCCTTGCTATTCACTTTGCATCAGCCAATCTGTGTGAGCACTGCCACGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGACTCACaaa                     <  2:478477/138‑1 (MQ=11)                                                                       aCTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGTTAAGCGCCCTCCCGa  >  1:312191/1‑143 (MQ=14)                                                                       aCTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGa  >  1:44318/1‑143 (MQ=31)                                                                       aCTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCACCCTCCCGa  >  1:739009/1‑143 (MQ=14)                                                                                                                                        |                                                                              TTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAACCGCAGGTTCCCCTACGGTTACCTTGTTACGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCCCGA  >  NC_000913/2729495‑2729707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.